RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 ZSCAN5CA6NGD5 496 aaPredicted RBP6.18□□□□□ -1.42
CHMP3-206ENST00000466032 ARHGAP42A6NI28 874 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 VGLL3A8MV65 326 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 E9PAM4 449 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 AP3B1O00203 1094 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 PER2O15055 1255 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 DCLK1O15075 740 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 ZNF185O15231 689 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 CREB3O43889 395 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 ERLIN1O75477 346 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 TADA3O75528 432 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 STC2O76061 302 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 LRIG2O94898 1065 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 ECEL1O95672 775 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 SPATA31D3P0C874 917 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 GOLGA6DP0CG33 693 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 ERCC2P18074 760 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 FSHRP23945 695 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 COILP38432 576 aaPredicted RBP6.18□□□□□ -1.42
CHMP3-206ENST00000466032 TNNT3P45378 269 aaPredicted RBP6.18□□□□□ -1.42
CHMP3-206ENST00000466032 MARCKSL1P49006 195 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 GTF2A1P52655 376 aaPredicted RBP6.18□□□□□ -1.42
CHMP3-206ENST00000466032 VCPP55072 806 aaKnown RBP6.18□□□□□ -1.42
CHMP3-206ENST00000466032 GEMIN4P57678 1058 aaKnown RBP6.18□□□□□ -1.42
CHMP3-206ENST00000466032 SNRPNP63162 240 aaKnown RBP6.18□□□□□ -1.42
CHMP3-206ENST00000466032 DR1Q01658 176 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 NR1H3Q13133 447 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 ZNF211Q13398 564 aaPredicted RBP6.18□□□□□ -1.42
CHMP3-206ENST00000466032 CUL1Q13616 776 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 DPYSQ14117 519 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 NOMO1Q15155 1222 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 ZKSCAN8Q15776 578 aaPredicted RBP6.18□□□□□ -1.42
CHMP3-206ENST00000466032 ANO4Q32M45 955 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 PARP15Q460N3 678 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 ATP13A4Q4VNC1 1196 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 MPPE1Q53F39 396 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 MS4A13Q5J8X5 152 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 PRSS36Q5K4E3 855 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 GPR158Q5T848 1215 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 KAZNQ674X7 775 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 SPATA31D4Q6ZUB0 917 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 RBM23Q86U06 439 aaKnown RBP6.18□□□□□ -1.42
CHMP3-206ENST00000466032 CHSY1Q86X52 802 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 FAM217AQ8IXS0 508 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 IFT20Q8IY31 132 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 UMODL1-AS1Q8N2C9 162 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 BBS5Q8N3I7 341 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 CCDC185Q8N715 623 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 PLD5Q8N7P1 536 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 RTL3Q8N8U3 475 aaKnown RBP6.18□□□□□ -1.42
CHMP3-206ENST00000466032 MAB21L3Q8N8X9 362 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 HJURPQ8NCD3 748 aaPredicted RBP6.18□□□□□ -1.42
CHMP3-206ENST00000466032 PCDH19Q8TAB3 1148 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 ADAM32Q8TC27 787 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 NSMCE1Q8WV22 266 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 RSAD2Q8WXG1 361 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 NXPE3Q969Y0 559 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 ZNF707Q96C28 371 aaPredicted RBP6.18□□□□□ -1.42
CHMP3-206ENST00000466032 PABPC5Q96DU9 382 aaKnown RBP6.18□□□□□ -1.42
CHMP3-206ENST00000466032 PEBP4Q96S96 227 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 KCTD15Q96SI1 283 aaPredicted RBP6.18□□□□□ -1.42
CHMP3-206ENST00000466032 SLC2A11Q9BYW1 496 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 FRMD8Q9BZ67 464 aaPredicted RBP6.18□□□□□ -1.42
CHMP3-206ENST00000466032 FOXP3Q9BZS1 431 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 FAM107BQ9H098 131 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 SIK2Q9H0K1 926 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 MAGEH1Q9H213 219 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 CERS4Q9HA82 394 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 TRPC7Q9HCX4 862 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 ZNF334Q9HCZ1 680 aaPredicted RBP6.18□□□□□ -1.42
CHMP3-206ENST00000466032 ARHGEF4Q9NR80 690 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 FAM114A2Q9NRY5 505 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 TMEM248Q9NWD8 314 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 GOLGA6AQ9NYA3 693 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 COX16Q9P0S2 106 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 ZNF148Q9UQR1 794 aa6.18□□□□□ -1.42
CHMP3-206ENST00000466032 PDE4DIPQ5VU43 2346 aa6.17□□□□□ -1.42
CHMP3-206ENST00000466032 GBF1Q92538 1859 aa6.17□□□□□ -1.42
CHMP3-206ENST00000466032 MYO16Q9Y6X6 1858 aa6.17□□□□□ -1.42
CHMP3-206ENST00000466032 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.17□□□□□ -1.42
CHMP3-206ENST00000466032 ILVBLA1L0T0 632 aa6.17□□□□□ -1.42
CHMP3-206ENST00000466032 CDC14CA4D256 554 aa6.17□□□□□ -1.42
CHMP3-206ENST00000466032 C2orf78A6NCI8 922 aa6.17□□□□□ -1.42
CHMP3-206ENST00000466032 TTC36A6NLP5 189 aa6.17□□□□□ -1.42
CHMP3-206ENST00000466032 ERI2A8K979 691 aaKnown RBP6.17□□□□□ -1.42
CHMP3-206ENST00000466032 PI4K2BG5E9Z4 385 aa6.17□□□□□ -1.42
CHMP3-206ENST00000466032 PSMD3O43242 534 aa6.17□□□□□ -1.42
CHMP3-206ENST00000466032 MSI1O43347 362 aaKnown RBP6.17□□□□□ -1.42
CHMP3-206ENST00000466032 LIASO43766 372 aa6.17□□□□□ -1.42
CHMP3-206ENST00000466032 RFPL2O75678 378 aa6.17□□□□□ -1.42
CHMP3-206ENST00000466032 LUC7L3O95232 432 aaKnown RBP6.17□□□□□ -1.42
CHMP3-206ENST00000466032 TBX18O95935 607 aa6.17□□□□□ -1.42
CHMP3-206ENST00000466032 MOCS2O96007 188 aaPredicted RBP6.17□□□□□ -1.42
CHMP3-206ENST00000466032 IVLP07476 585 aa6.17□□□□□ -1.42
CHMP3-206ENST00000466032 RBP3P10745 1247 aa6.17□□□□□ -1.42
CHMP3-206ENST00000466032 TCF4P15884 667 aa6.17□□□□□ -1.42
CHMP3-206ENST00000466032 GOT1P17174 413 aa6.17□□□□□ -1.42
CHMP3-206ENST00000466032 TFE3P19532 575 aaPredicted RBP6.17□□□□□ -1.42
CHMP3-206ENST00000466032 ITIH2P19823 946 aa6.17□□□□□ -1.42
CHMP3-206ENST00000466032 TACR2P21452 398 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms