RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 RAD51CO43502 376 aa15.95■□□□□ 0.14
SHMT2-202ENST00000414700 LIASO43766 372 aa15.95■□□□□ 0.14
SHMT2-202ENST00000414700 DDX6P26196 483 aaKnown RBP eCLIP15.95■□□□□ 0.143e-6■□□□□ 9.6
SHMT2-202ENST00000414700 LSP1P33241 339 aa15.95■□□□□ 0.14
SHMT2-202ENST00000414700 SLC11A2P49281 568 aa15.95■□□□□ 0.14
SHMT2-202ENST00000414700 SLC7A5Q01650 507 aa15.95■□□□□ 0.14
SHMT2-202ENST00000414700 NRG1Q02297 640 aaPredicted RBP15.95■□□□□ 0.14
SHMT2-202ENST00000414700 Q6ZNB5 142 aa15.95■□□□□ 0.14
SHMT2-202ENST00000414700 GET4Q7L5D6 327 aaPredicted RBP15.95■□□□□ 0.14
SHMT2-202ENST00000414700 TFAP2DQ7Z6R9 452 aa15.95■□□□□ 0.14
SHMT2-202ENST00000414700 NPAS3Q8IXF0 933 aa15.95■□□□□ 0.14
SHMT2-202ENST00000414700 LGI2Q8N0V4 545 aa15.95■□□□□ 0.14
SHMT2-202ENST00000414700 C12orf50Q8NA57 414 aaPredicted RBP15.95■□□□□ 0.14
SHMT2-202ENST00000414700 TSEN2Q8NCE0 465 aaKnown RBP15.95■□□□□ 0.14
SHMT2-202ENST00000414700 ZNF473Q8WTR7 871 aaKnown RBP15.95■□□□□ 0.14
SHMT2-202ENST00000414700 MAIP1Q8WWC4 291 aa15.95■□□□□ 0.14
SHMT2-202ENST00000414700 FGF13Q92913 245 aa15.95■□□□□ 0.14
SHMT2-202ENST00000414700 TBC1D31Q96DN5 1066 aa15.95■□□□□ 0.14
SHMT2-202ENST00000414700 RPRD1AQ96P16 312 aaPredicted RBP15.95■□□□□ 0.14
SHMT2-202ENST00000414700 S1PR5Q9H228 398 aa15.95■□□□□ 0.14
SHMT2-202ENST00000414700 TDP1Q9NUW8 608 aa15.95■□□□□ 0.14
SHMT2-202ENST00000414700 IGLV3-10A0A075B6K4 115 aa15.95■□□□□ 0.14
SHMT2-202ENST00000414700 COILP38432 576 aaPredicted RBP15.95■□□□□ 0.14
SHMT2-202ENST00000414700 RPS24P62847 133 aaKnown RBP15.95■□□□□ 0.14
SHMT2-202ENST00000414700 NOMO1Q15155 1222 aa15.95■□□□□ 0.14
SHMT2-202ENST00000414700 CCNG2Q16589 344 aa15.95■□□□□ 0.14
SHMT2-202ENST00000414700 CEP85LQ5SZL2 805 aa15.95■□□□□ 0.14
SHMT2-202ENST00000414700 ADGRF1Q5T601 910 aa15.95■□□□□ 0.14
SHMT2-202ENST00000414700 PRUNE1Q86TP1 453 aa15.95■□□□□ 0.14
SHMT2-202ENST00000414700 BBS7Q8IWZ6 715 aa15.95■□□□□ 0.14
SHMT2-202ENST00000414700 SLC35B2Q8TB61 432 aa15.95■□□□□ 0.14
SHMT2-202ENST00000414700 ZSCAN18Q8TBC5 510 aaPredicted RBP15.95■□□□□ 0.14
SHMT2-202ENST00000414700 ADAM7Q9H2U9 754 aa15.95■□□□□ 0.14
SHMT2-202ENST00000414700 ZSCAN5CA6NGD5 496 aaPredicted RBP15.94■□□□□ 0.14
SHMT2-202ENST00000414700 TTI1O43156 1089 aa15.94■□□□□ 0.14
SHMT2-202ENST00000414700 TSPAN3O60637 253 aa15.94■□□□□ 0.14
SHMT2-202ENST00000414700 PFKLP17858 780 aa15.94■□□□□ 0.14
SHMT2-202ENST00000414700 TGM2P21980 687 aa15.94■□□□□ 0.14
SHMT2-202ENST00000414700 FSHRP23945 695 aa15.94■□□□□ 0.14
SHMT2-202ENST00000414700 NUMBP49757 651 aa15.94■□□□□ 0.14
SHMT2-202ENST00000414700 NRLP54845 237 aa15.94■□□□□ 0.14
SHMT2-202ENST00000414700 BYSLQ13895 437 aaKnown RBP15.94■□□□□ 0.14
SHMT2-202ENST00000414700 OASLQ15646 514 aaKnown RBP15.94■□□□□ 0.14
SHMT2-202ENST00000414700 NLRP14Q86W24 1093 aa15.94■□□□□ 0.14
SHMT2-202ENST00000414700 CCDC13Q8IYE1 715 aa15.94■□□□□ 0.14
SHMT2-202ENST00000414700 CELF6Q96J87 481 aaKnown RBP15.94■□□□□ 0.14
SHMT2-202ENST00000414700 LRRC3BQ96PB8 259 aa15.94■□□□□ 0.14
SHMT2-202ENST00000414700 TMEM121Q9BTD3 319 aa15.94■□□□□ 0.14
SHMT2-202ENST00000414700 KLC2Q9H0B6 622 aa15.94■□□□□ 0.14
SHMT2-202ENST00000414700 ACTR5Q9H9F9 607 aaPredicted RBP15.94■□□□□ 0.14
SHMT2-202ENST00000414700 SH3BP1Q9Y3L3 701 aa15.94■□□□□ 0.14
SHMT2-202ENST00000414700 NYNRINQ9P2P1 1898 aaKnown RBP15.94■□□□□ 0.14
SHMT2-202ENST00000414700 TRIOO75962 3097 aa15.94■□□□□ 0.14
SHMT2-202ENST00000414700 F5H5T6 163 aa15.94■□□□□ 0.14
SHMT2-202ENST00000414700 HOXB8P17481 243 aaPredicted RBP15.94■□□□□ 0.14
SHMT2-202ENST00000414700 CHRNA3P32297 505 aa15.94■□□□□ 0.14
SHMT2-202ENST00000414700 EIF3EP60228 445 aaKnown RBP15.94■□□□□ 0.14
SHMT2-202ENST00000414700 PAFAH1B3Q15102 231 aaKnown RBP15.94■□□□□ 0.14
SHMT2-202ENST00000414700 RNF187Q5TA31 235 aaPredicted RBP15.94■□□□□ 0.14
SHMT2-202ENST00000414700 C8orf74Q6P047 294 aa15.94■□□□□ 0.14
SHMT2-202ENST00000414700 HTR3DQ70Z44 454 aa15.94■□□□□ 0.14
SHMT2-202ENST00000414700 CCDC105Q8IYK2 499 aa15.94■□□□□ 0.14
SHMT2-202ENST00000414700 BHMTQ93088 406 aa15.94■□□□□ 0.14
SHMT2-202ENST00000414700 AZIN2Q96A70 460 aa15.94■□□□□ 0.14
SHMT2-202ENST00000414700 RSPRY1Q96DX4 576 aa15.94■□□□□ 0.14
SHMT2-202ENST00000414700 ZYG11BQ9C0D3 744 aa15.94■□□□□ 0.14
SHMT2-202ENST00000414700 SLC40A1Q9NP59 571 aa15.94■□□□□ 0.14
SHMT2-202ENST00000414700 STIM2Q9P246 746 aa15.94■□□□□ 0.14
SHMT2-202ENST00000414700 ZNF212Q9UDV6 495 aa15.94■□□□□ 0.14
SHMT2-202ENST00000414700 DMGDHQ9UI17 866 aaKnown RBP15.94■□□□□ 0.14
SHMT2-202ENST00000414700 STOML2Q9UJZ1 356 aa15.94■□□□□ 0.14
SHMT2-202ENST00000414700 ZFP37Q9Y6Q3 630 aaPredicted RBP15.94■□□□□ 0.14
SHMT2-202ENST00000414700 MYO18AQ92614 2054 aaKnown RBP15.94■□□□□ 0.14
SHMT2-202ENST00000414700 CLUHO75153 1309 aa15.93■□□□□ 0.14
SHMT2-202ENST00000414700 VCANP13611 3396 aa15.93■□□□□ 0.14
SHMT2-202ENST00000414700 DRGXA6NNA5 263 aa15.93■□□□□ 0.14
SHMT2-202ENST00000414700 PPP1R12AO14974 1030 aaPredicted RBP15.93■□□□□ 0.14
SHMT2-202ENST00000414700 RBP3P10745 1247 aa15.93■□□□□ 0.14
SHMT2-202ENST00000414700 VIPR2P41587 438 aa15.93■□□□□ 0.14
SHMT2-202ENST00000414700 PTGIRP43119 386 aa15.93■□□□□ 0.14
SHMT2-202ENST00000414700 ATP1A2P50993 1020 aa15.93■□□□□ 0.14
SHMT2-202ENST00000414700 ZNF135P52742 658 aaPredicted RBP15.93■□□□□ 0.14
SHMT2-202ENST00000414700 COL19A1Q14993 1142 aa15.93■□□□□ 0.14
SHMT2-202ENST00000414700 GLIS1Q8NBF1 620 aa15.93■□□□□ 0.14
SHMT2-202ENST00000414700 MAGEC3Q8TD91 643 aa15.93■□□□□ 0.14
SHMT2-202ENST00000414700 MYLIPQ8WY64 445 aa15.93■□□□□ 0.14
SHMT2-202ENST00000414700 MSLNLQ96KJ4 702 aa15.93■□□□□ 0.14
SHMT2-202ENST00000414700 OLFM3Q96PB7 478 aa15.93■□□□□ 0.14
SHMT2-202ENST00000414700 ZIM3Q96PE6 472 aa15.93■□□□□ 0.14
SHMT2-202ENST00000414700 GAS2L1Q99501 681 aaPredicted RBP15.93■□□□□ 0.14
SHMT2-202ENST00000414700 TRIM51Q9BSJ1 452 aa15.93■□□□□ 0.14
SHMT2-202ENST00000414700 PPARGC1AQ9UBK2 798 aaKnown RBP15.93■□□□□ 0.14
SHMT2-202ENST00000414700 PCYOX1Q9UHG3 505 aa15.93■□□□□ 0.14
SHMT2-202ENST00000414700 ZFXP17010 805 aaPredicted RBP15.92■□□□□ 0.14
SHMT2-202ENST00000414700 GDF10P55107 478 aa15.92■□□□□ 0.14
SHMT2-202ENST00000414700 CRYMQ14894 314 aa15.92■□□□□ 0.14
SHMT2-202ENST00000414700 CCDC85BQ15834 202 aaPredicted RBP15.92■□□□□ 0.14
SHMT2-202ENST00000414700 ZNF77Q15935 545 aa15.92■□□□□ 0.14
SHMT2-202ENST00000414700 SNCBQ16143 134 aa15.92■□□□□ 0.14
SHMT2-202ENST00000414700 FAM78AQ5JUQ0 283 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms