RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 PACSIN2Q9UNF0 486 aaPredicted RBP18.37■□□□□ 0.53
PDLIM7-202ENST00000355841 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.37■□□□□ 0.53
PDLIM7-202ENST00000355841 ATG2BQ96BY7 2078 aa18.36■□□□□ 0.53
PDLIM7-202ENST00000355841 LRRD1A4D1F6 860 aa18.36■□□□□ 0.53
PDLIM7-202ENST00000355841 H3BRJ5 948 aa18.36■□□□□ 0.53
PDLIM7-202ENST00000355841 KRT1P04264 644 aa18.36■□□□□ 0.53
PDLIM7-202ENST00000355841 ERCC2P18074 760 aa18.36■□□□□ 0.53
PDLIM7-202ENST00000355841 ARL4AP40617 200 aa18.36■□□□□ 0.53
PDLIM7-202ENST00000355841 TNFRSF4P43489 277 aa18.36■□□□□ 0.53
PDLIM7-202ENST00000355841 KIR2DL1P43626 348 aaPredicted RBP18.36■□□□□ 0.53
PDLIM7-202ENST00000355841 DPYSQ14117 519 aa18.36■□□□□ 0.53
PDLIM7-202ENST00000355841 LLGL1Q15334 1064 aa18.36■□□□□ 0.53
PDLIM7-202ENST00000355841 PREPLQ4J6C6 727 aaPredicted RBP18.36■□□□□ 0.53
PDLIM7-202ENST00000355841 PITRM1Q5JRX3 1037 aa18.36■□□□□ 0.53
PDLIM7-202ENST00000355841 EGFLAMQ63HQ2 1017 aa18.36■□□□□ 0.53
PDLIM7-202ENST00000355841 MBLAC2Q68D91 279 aa18.36■□□□□ 0.53
PDLIM7-202ENST00000355841 KIAA0907Q7Z7F0 614 aaPredicted RBP18.36■□□□□ 0.53
PDLIM7-202ENST00000355841 AHI1Q8N157 1196 aa18.36■□□□□ 0.53
PDLIM7-202ENST00000355841 FBXL6Q8N531 539 aa18.36■□□□□ 0.53
PDLIM7-202ENST00000355841 RNF10Q8N5U6 811 aaKnown RBP18.36■□□□□ 0.53
PDLIM7-202ENST00000355841 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.36■□□□□ 0.53
PDLIM7-202ENST00000355841 RTL3Q8N8U3 475 aaKnown RBP18.36■□□□□ 0.53
PDLIM7-202ENST00000355841 OR7D4Q8NG98 312 aa18.36■□□□□ 0.53
PDLIM7-202ENST00000355841 RPLP0P6Q8NHW5 317 aa18.36■□□□□ 0.53
PDLIM7-202ENST00000355841 TSC1Q92574 1164 aa18.36■□□□□ 0.53
PDLIM7-202ENST00000355841 RNF25Q96BH1 459 aaPredicted RBP18.36■□□□□ 0.53
PDLIM7-202ENST00000355841 CALR3Q96L12 384 aaKnown RBP18.36■□□□□ 0.53
PDLIM7-202ENST00000355841 ACOX2Q99424 681 aa18.36■□□□□ 0.53
PDLIM7-202ENST00000355841 FEM1AQ9BSK4 669 aa18.36■□□□□ 0.53
PDLIM7-202ENST00000355841 ETNK2Q9NVF9 386 aa18.36■□□□□ 0.53
PDLIM7-202ENST00000355841 ELOVL2Q9NXB9 296 aa18.36■□□□□ 0.53
PDLIM7-202ENST00000355841 ZDBF2Q9HCK1 2354 aa18.36■□□□□ 0.53
PDLIM7-202ENST00000355841 USP27XA6NNY8 438 aa18.35■□□□□ 0.53
PDLIM7-202ENST00000355841 KDELR1P24390 212 aa18.35■□□□□ 0.53
PDLIM7-202ENST00000355841 CTSOP43234 321 aaPredicted RBP18.35■□□□□ 0.53
PDLIM7-202ENST00000355841 CLCN5P51795 746 aa18.35■□□□□ 0.53
PDLIM7-202ENST00000355841 LRRC32Q14392 662 aa18.35■□□□□ 0.53
PDLIM7-202ENST00000355841 PLEKHG6Q3KR16 790 aa18.35■□□□□ 0.53
PDLIM7-202ENST00000355841 DGKKQ5KSL6 1271 aa18.35■□□□□ 0.53
PDLIM7-202ENST00000355841 C6orf118Q5T5N4 469 aa18.35■□□□□ 0.53
PDLIM7-202ENST00000355841 LRRC38Q5VT99 294 aa18.35■□□□□ 0.53
PDLIM7-202ENST00000355841 ZNF662Q6ZS27 426 aa18.35■□□□□ 0.53
PDLIM7-202ENST00000355841 BMP8AQ7Z5Y6 402 aa18.35■□□□□ 0.53
PDLIM7-202ENST00000355841 SETD3Q86TU7 594 aaPredicted RBP18.35■□□□□ 0.53
PDLIM7-202ENST00000355841 NT5DC3Q86UY8 548 aa18.35■□□□□ 0.53
PDLIM7-202ENST00000355841 REXO1L1PQ8IX06 675 aa18.35■□□□□ 0.53
PDLIM7-202ENST00000355841 CCDC33Q8N5R6 958 aa18.35■□□□□ 0.53
PDLIM7-202ENST00000355841 CLDN23Q96B33 292 aa18.35■□□□□ 0.53
PDLIM7-202ENST00000355841 ERLEC1Q96DZ1 483 aa18.35■□□□□ 0.53
PDLIM7-202ENST00000355841 ALG14Q96F25 216 aa18.35■□□□□ 0.53
PDLIM7-202ENST00000355841 OSBPL6Q9BZF3 934 aa18.35■□□□□ 0.53
PDLIM7-202ENST00000355841 CATSPERBQ9H7T0 1116 aa18.35■□□□□ 0.53
PDLIM7-202ENST00000355841 C2orf42Q9NWW7 574 aa18.35■□□□□ 0.53
PDLIM7-202ENST00000355841 DLGAP2Q9P1A6 1054 aa18.35■□□□□ 0.53
PDLIM7-202ENST00000355841 VPS28Q9UK41 221 aa18.35■□□□□ 0.53
PDLIM7-202ENST00000355841 OR51B4Q9Y5P0 310 aa18.35■□□□□ 0.53
PDLIM7-202ENST00000355841 C3orf70A6NLC5 250 aaPredicted RBP18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 NCAM2O15394 837 aa18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 FGF10O15520 208 aaPredicted RBP18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 PSTPIP1O43586 416 aa18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 CHRM1P11229 460 aaPredicted RBP18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 ACVRL1P37023 503 aa18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 WASP42768 502 aa18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 DNA2P51530 1060 aa18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 FBXO43Q4G163 708 aa18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 NUDT18Q6ZVK8 323 aa18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 PEX26Q7Z412 305 aa18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 ALLCQ8N6M5 410 aa18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 ZNF513Q8N8E2 541 aaPredicted RBP18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 ZNF557Q8N988 423 aaPredicted RBP18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 FAM71BQ8TC56 605 aa18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 USP33Q8TEY7 942 aa18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 CELF6Q96J87 481 aaKnown RBP18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 SPON2Q9BUD6 331 aa18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 NOL6Q9H6R4 1146 aaKnown RBP18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 DOCK4Q8N1I0 1966 aa18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 WDFY4Q6ZS81 3184 aa18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 WASH3PC4AMC7 463 aa18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 GPR37L1O60883 481 aa18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 POLR2EP19388 210 aaKnown RBP18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 GLDCP23378 1020 aa18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 HTR7P34969 479 aa18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 HCAR3P49019 387 aa18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 MAPKAPK2P49137 400 aa18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 GNA12Q03113 381 aa18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 PDK2Q15119 407 aa18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 TMEM31Q5JXX7 168 aa18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 TP53INP2Q8IXH6 220 aa18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 NPWQ8N729 165 aa18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 WFIKKN2Q8TEU8 576 aa18.34■□□□□ 0.53
PDLIM7-202ENST00000355841 ILVBLA1L0T0 632 aa18.33■□□□□ 0.52
PDLIM7-202ENST00000355841 WASH4PA8MWX3 477 aa18.33■□□□□ 0.52
PDLIM7-202ENST00000355841 SNAP91O60641 907 aa18.33■□□□□ 0.52
PDLIM7-202ENST00000355841 RAMP2O60895 175 aa18.33■□□□□ 0.52
PDLIM7-202ENST00000355841 KLF8O95600 359 aaPredicted RBP18.33■□□□□ 0.52
PDLIM7-202ENST00000355841 MTAPQ13126 283 aa18.33■□□□□ 0.52
PDLIM7-202ENST00000355841 ODF2Q5BJF6 829 aa18.33■□□□□ 0.52
PDLIM7-202ENST00000355841 ANKRD20A8PQ5CZ79 823 aa18.33■□□□□ 0.52
PDLIM7-202ENST00000355841 MFSD7Q6UXD7 560 aa18.33■□□□□ 0.52
PDLIM7-202ENST00000355841 MAP7D3Q8IWC1 876 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms