RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 FAM71AQ8IYT1 594 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 C2orf15Q8WU43 125 aaKnown RBP9.9□□□□□ -0.82
GABPA-201ENST00000354828 WWP1Q9H0M0 922 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 ECT2Q9H8V3 914 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 IL23AQ9NPF7 189 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 L1RE1Q9UN81 338 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 COL1A1P02452 1464 aaPredicted RBP9.9□□□□□ -0.82
GABPA-201ENST00000354828 BUD23O43709 281 aaKnown RBP9.9□□□□□ -0.82
GABPA-201ENST00000354828 CST3P01034 146 aaPredicted RBP9.9□□□□□ -0.82
GABPA-201ENST00000354828 KDELR1P24390 212 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 KRT20P35900 424 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 NPY2RP49146 381 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 RFWD3Q6PCD5 774 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 FBXO38Q6PIJ6 1188 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 C12orf56Q8IXR9 622 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.9□□□□□ -0.82
GABPA-201ENST00000354828 TRMT61BQ9BVS5 477 aaKnown RBP9.9□□□□□ -0.82
GABPA-201ENST00000354828 SHCBP1LQ9BZQ2 653 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 FZD8Q9H461 694 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 KIF17Q9P2E2 1029 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 ACOT9Q9Y305 439 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 DTNAQ9Y4J8 743 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 MYO9BQ13459 2157 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 MYBPHLA2RUH7 354 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 CTPS1P17812 591 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 RBL1P28749 1068 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 CD151P48509 253 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 DGKEP52429 567 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 NCALDP61601 193 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 PEX6Q13608 980 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 SLC10A6Q3KNW5 377 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 BEND6Q5SZJ8 279 aaPredicted RBP9.9□□□□□ -0.82
GABPA-201ENST00000354828 TMCO4Q5TGY1 634 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 ZNF470Q6ECI4 717 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 LRRC55Q6ZSA7 311 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 RFX8Q6ZV50 586 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 C4orf32Q8N8J7 132 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 SHC3Q92529 594 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 MTMR8Q96EF0 704 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 ATP6V1G3Q96LB4 118 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 LRRC37BQ96QE4 947 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 TMEM175Q9BSA9 504 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 LACRTQ9GZZ8 138 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 ELOVL6Q9H5J4 265 aa9.9□□□□□ -0.82
GABPA-201ENST00000354828 FAM32AQ9Y421 112 aaKnown RBP9.9□□□□□ -0.82
GABPA-201ENST00000354828 CCNB1P14635 433 aa9.9□□□□□ -0.83
GABPA-201ENST00000354828 MGAT1P26572 445 aa9.9□□□□□ -0.83
GABPA-201ENST00000354828 DGKGP49619 791 aa9.9□□□□□ -0.83
GABPA-201ENST00000354828 SKP1P63208 163 aa9.9□□□□□ -0.83
GABPA-201ENST00000354828 TAS2R13Q9NYV9 303 aa9.9□□□□□ -0.83
GABPA-201ENST00000354828 ASB3Q9Y575 518 aa9.9□□□□□ -0.83
GABPA-201ENST00000354828 LRRC72A6NJI9 287 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 ZNF839A8K0R7 811 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 ZBTB14O43829 449 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 CCNT2O60583 730 aaKnown RBP9.89□□□□□ -0.83
GABPA-201ENST00000354828 CCDC22O60826 627 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 TADA3O75528 432 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 AGTP01019 485 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 MAXP61244 160 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 TEAD4Q15561 434 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 C2orf27AQ580R0 203 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 LRRC8EQ6NSJ5 796 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 ZSWIM2Q8NEG5 633 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 TSTD1Q8NFU3 115 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 MAGEC3Q8TD91 643 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 ELMO1Q92556 727 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 UNKQ9C0B0 810 aaKnown RBP9.89□□□□□ -0.83
GABPA-201ENST00000354828 BPIFA1Q9NP55 256 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 STXBP5LQ9Y2K9 1186 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 PKD1L3Q7Z443 1732 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 MGAT4DA6NG13 374 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 CILPO75339 1184 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 FSBPO95073 299 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 GLI1P08151 1106 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 COL6A1P12109 1028 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 FOSL2P15408 326 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 FMO4P31512 558 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 CAP1Q01518 475 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 MGAT5Q09328 741 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 HSPA14Q0VDF9 509 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 SNAP47Q5SQN1 464 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 CACHD1Q5VU97 1274 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 HLA-DQA1Q5Y7H0 255 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 DNAJB7Q7Z6W7 309 aaPredicted RBP9.89□□□□□ -0.83
GABPA-201ENST00000354828 ARMC2Q8NEN0 867 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 NDRG1Q92597 394 aaKnown RBP9.89□□□□□ -0.83
GABPA-201ENST00000354828 BCAS3Q9H6U6 928 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 EIF3LQ9Y262 564 aaKnown RBP9.89□□□□□ -0.83
GABPA-201ENST00000354828 STARD13Q9Y3M8 1113 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 FAM47E-STBD1D6RA91 191 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 APOC4-APOC2K7ER74 178 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 APOC2P02655 101 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 GOT1P17174 413 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 ERCC2P18074 760 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 EEF1B2P24534 225 aaKnown RBP9.89□□□□□ -0.83
GABPA-201ENST00000354828 ALDH18A1P54886 795 aaKnown RBP9.89□□□□□ -0.83
GABPA-201ENST00000354828 VSNL1P62760 191 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 CES3Q6UWW8 571 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 LRRC49Q8IUZ0 686 aa9.89□□□□□ -0.83
GABPA-201ENST00000354828 PRDM16Q9HAZ2 1276 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms