RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 CYP17A1P05093 508 aa22.08■■□□□ 1.13
TPM1-204ENST00000334895 SERPINB6P35237 376 aa22.08■■□□□ 1.13
TPM1-204ENST00000334895 IFNAR2P48551 515 aa22.08■■□□□ 1.13
TPM1-204ENST00000334895 PUS10Q3MIT2 529 aaKnown RBP22.08■■□□□ 1.13
TPM1-204ENST00000334895 CXorf57Q6NSI4 855 aaKnown RBP22.08■■□□□ 1.13
TPM1-204ENST00000334895 MTSS1LQ765P7 747 aa22.08■■□□□ 1.13
TPM1-204ENST00000334895 B4GALNT4Q76KP1 1039 aa22.08■■□□□ 1.13
TPM1-204ENST00000334895 LZTR1Q8N653 840 aa22.08■■□□□ 1.13
TPM1-204ENST00000334895 NOA1Q8NC60 698 aaKnown RBP22.08■■□□□ 1.13
TPM1-204ENST00000334895 NKD2Q969F2 451 aaPredicted RBP22.08■■□□□ 1.13
TPM1-204ENST00000334895 MAGOHBQ96A72 148 aaKnown RBP22.08■■□□□ 1.13
TPM1-204ENST00000334895 PHF7Q9BWX1 381 aaPredicted RBP22.08■■□□□ 1.13
TPM1-204ENST00000334895 SLC39A8Q9C0K1 460 aa22.08■■□□□ 1.13
TPM1-204ENST00000334895 C10orf88Q9H8K7 445 aa22.08■■□□□ 1.13
TPM1-204ENST00000334895 MARK1Q9P0L2 795 aa22.08■■□□□ 1.13
TPM1-204ENST00000334895 TBC1D30Q9Y2I9 924 aa22.08■■□□□ 1.13
TPM1-204ENST00000334895 LUC7L3O95232 432 aaKnown RBP22.07■■□□□ 1.12
TPM1-204ENST00000334895 BMP1P13497 986 aa22.07■■□□□ 1.12
TPM1-204ENST00000334895 PSMC3P17980 439 aa22.07■■□□□ 1.12
TPM1-204ENST00000334895 OR1E1P30953 314 aa22.07■■□□□ 1.12
TPM1-204ENST00000334895 KCNJ1P48048 391 aa22.07■■□□□ 1.12
TPM1-204ENST00000334895 EIF3EP60228 445 aaKnown RBP22.07■■□□□ 1.12
TPM1-204ENST00000334895 GALNT2Q10471 571 aa22.07■■□□□ 1.12
TPM1-204ENST00000334895 DHCR24Q15392 516 aa22.07■■□□□ 1.12
TPM1-204ENST00000334895 OASLQ15646 514 aaKnown RBP22.07■■□□□ 1.12
TPM1-204ENST00000334895 KCTD19Q17RG1 926 aaPredicted RBP22.07■■□□□ 1.12
TPM1-204ENST00000334895 FSCBQ5H9T9 825 aa22.07■■□□□ 1.12
TPM1-204ENST00000334895 ZC3H18Q86VM9 953 aaKnown RBP22.07■■□□□ 1.12
TPM1-204ENST00000334895 KLHL7Q8IXQ5 586 aa22.07■■□□□ 1.12
TPM1-204ENST00000334895 EBF3Q9H4W6 596 aa22.07■■□□□ 1.12
TPM1-204ENST00000334895 HPS4Q9NQG7 708 aa22.07■■□□□ 1.12
TPM1-204ENST00000334895 OTOL1A6NHN0 477 aaPredicted RBP22.06■■□□□ 1.12
TPM1-204ENST00000334895 TNK2Q07912 1038 aa22.06■■□□□ 1.12
TPM1-204ENST00000334895 DRICH1Q6PGQ1 229 aaPredicted RBP22.06■■□□□ 1.12
TPM1-204ENST00000334895 CARNMT1Q8N4J0 409 aa22.06■■□□□ 1.12
TPM1-204ENST00000334895 RSAD2Q8WXG1 361 aa22.06■■□□□ 1.12
TPM1-204ENST00000334895 RPGRIP1Q96KN7 1286 aa22.06■■□□□ 1.12
TPM1-204ENST00000334895 KRT12Q99456 494 aa22.06■■□□□ 1.12
TPM1-204ENST00000334895 BBS2Q9BXC9 721 aa22.06■■□□□ 1.12
TPM1-204ENST00000334895 FRMD8P1Q9BZ68 369 aaPredicted RBP22.06■■□□□ 1.12
TPM1-204ENST00000334895 THG1LQ9NWX6 298 aaKnown RBP22.06■■□□□ 1.12
TPM1-204ENST00000334895 FAM50BQ9Y247 325 aa22.06■■□□□ 1.12
TPM1-204ENST00000334895 MYO10Q9HD67 2058 aa22.06■■□□□ 1.12
TPM1-204ENST00000334895 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.06■■□□□ 1.12
TPM1-204ENST00000334895 TYW5A2RUC4 315 aaKnown RBP22.06■■□□□ 1.12
TPM1-204ENST00000334895 NEDD8-MDP1E9PL57 170 aa22.06■■□□□ 1.12
TPM1-204ENST00000334895 MCF2LO15068 1137 aa22.06■■□□□ 1.12
TPM1-204ENST00000334895 CYBBP04839 570 aa22.06■■□□□ 1.12
TPM1-204ENST00000334895 RBP3P10745 1247 aa22.06■■□□□ 1.12
TPM1-204ENST00000334895 COILP38432 576 aaPredicted RBP22.06■■□□□ 1.12
TPM1-204ENST00000334895 NDST2P52849 883 aa22.06■■□□□ 1.12
TPM1-204ENST00000334895 ZNF177Q13360 481 aaPredicted RBP22.06■■□□□ 1.12
TPM1-204ENST00000334895 BYSLQ13895 437 aaKnown RBP22.06■■□□□ 1.12
TPM1-204ENST00000334895 ARHGAP36Q6ZRI8 547 aa22.06■■□□□ 1.12
TPM1-204ENST00000334895 DEPDC1BQ8WUY9 529 aa22.06■■□□□ 1.12
TPM1-204ENST00000334895 LGMNQ99538 433 aa22.06■■□□□ 1.12
TPM1-204ENST00000334895 HOMER3Q9NSC5 361 aa22.06■■□□□ 1.12
TPM1-204ENST00000334895 DONSONQ9NYP3 566 aa22.06■■□□□ 1.12
TPM1-204ENST00000334895 RAD54BQ9Y620 910 aa22.06■■□□□ 1.12
TPM1-204ENST00000334895 A0A0D9SEW6 157 aa22.05■■□□□ 1.12
TPM1-204ENST00000334895 RASA4BC9J798 803 aa22.05■■□□□ 1.12
TPM1-204ENST00000334895 RASA4O43374 803 aa22.05■■□□□ 1.12
TPM1-204ENST00000334895 RAMP2O60895 175 aa22.05■■□□□ 1.12
TPM1-204ENST00000334895 SLU7O95391 586 aaKnown RBP22.05■■□□□ 1.12
TPM1-204ENST00000334895 CHRNA3P32297 505 aa22.05■■□□□ 1.12
TPM1-204ENST00000334895 XRCC4Q13426 336 aa22.05■■□□□ 1.12
TPM1-204ENST00000334895 PDGFRLQ15198 375 aa22.05■■□□□ 1.12
TPM1-204ENST00000334895 GAB4Q2WGN9 574 aa22.05■■□□□ 1.12
TPM1-204ENST00000334895 ANO4Q32M45 955 aa22.05■■□□□ 1.12
TPM1-204ENST00000334895 C6orf118Q5T5N4 469 aa22.05■■□□□ 1.12
TPM1-204ENST00000334895 CCDC137Q6PK04 289 aaKnown RBP22.05■■□□□ 1.12
TPM1-204ENST00000334895 SETD3Q86TU7 594 aaPredicted RBP22.05■■□□□ 1.12
TPM1-204ENST00000334895 MFN1Q8IWA4 741 aa22.05■■□□□ 1.12
TPM1-204ENST00000334895 HMCESQ96FZ2 354 aa22.05■■□□□ 1.12
TPM1-204ENST00000334895 QKIQ96PU8 341 aaKnown RBP eCLIP22.05■■□□□ 1.121e-8■■■■■ 42
TPM1-204ENST00000334895 H0Y626 953 aa22.04■■□□□ 1.12
TPM1-204ENST00000334895 DFFAO00273 331 aa22.04■■□□□ 1.12
TPM1-204ENST00000334895 ARNTLO00327 626 aa22.04■■□□□ 1.12
TPM1-204ENST00000334895 TYRP14679 529 aa22.04■■□□□ 1.12
TPM1-204ENST00000334895 ACVRL1P37023 503 aa22.04■■□□□ 1.12
TPM1-204ENST00000334895 GARSP41250 739 aaKnown RBP22.04■■□□□ 1.12
TPM1-204ENST00000334895 FNTAP49354 379 aa22.04■■□□□ 1.12
TPM1-204ENST00000334895 PAPOLAP51003 745 aaKnown RBP22.04■■□□□ 1.12
TPM1-204ENST00000334895 GNA12Q03113 381 aa22.04■■□□□ 1.12
TPM1-204ENST00000334895 PDK1Q15118 436 aa22.04■■□□□ 1.12
TPM1-204ENST00000334895 PRKD1Q15139 912 aaPredicted RBP22.04■■□□□ 1.12
TPM1-204ENST00000334895 TJAP1Q5JTD0 557 aa22.04■■□□□ 1.12
TPM1-204ENST00000334895 MMGT1Q8N4V1 131 aa22.04■■□□□ 1.12
TPM1-204ENST00000334895 ATP2A3Q93084 1043 aa22.04■■□□□ 1.12
TPM1-204ENST00000334895 LMLNQ96KR4 655 aa22.04■■□□□ 1.12
TPM1-204ENST00000334895 SHROOM3Q8TF72 1996 aa22.03■■□□□ 1.12
TPM1-204ENST00000334895 ILVBLA1L0T0 632 aa22.03■■□□□ 1.12
TPM1-204ENST00000334895 H7C0C1 242 aa22.03■■□□□ 1.12
TPM1-204ENST00000334895 CHADO15335 359 aa22.03■■□□□ 1.12
TPM1-204ENST00000334895 NFATC1O95644 943 aa22.03■■□□□ 1.12
TPM1-204ENST00000334895 RHOCP08134 193 aa22.03■■□□□ 1.12
TPM1-204ENST00000334895 ADH5P11766 374 aa22.03■■□□□ 1.12
TPM1-204ENST00000334895 VAV1P15498 845 aa22.03■■□□□ 1.12
TPM1-204ENST00000334895 GDI1P31150 447 aa22.03■■□□□ 1.12
TPM1-204ENST00000334895 ATP5OP48047 213 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms