RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 RTP4Q96DX8 246 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 TMA16Q96EY4 203 aaKnown RBP10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 TRIM51Q9BSJ1 452 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 POMKQ9H5K3 350 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 ANKZF1Q9H8Y5 726 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 NEU2Q9Y3R4 380 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 USP15Q9Y4E8 981 aaPredicted RBP10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 SGK1O00141 431 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 DFFAO00273 331 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 RAMP2O60895 175 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 STIP1P31948 543 aaKnown RBP10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 YBEYP58557 167 aaPredicted RBP10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 ZNF33AQ06730 810 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 ZNF177Q13360 481 aaPredicted RBP10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 PPP1R7Q15435 360 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 C6orf118Q5T5N4 469 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 Q7L0L9 218 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 SETD3Q86TU7 594 aaPredicted RBP10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 ATPAF2Q8N5M1 289 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 CCDC33Q8N5R6 958 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 GPR161Q8N6U8 529 aaKnown RBP10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 NETO2Q8NC67 525 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 BPIFB1Q8TDL5 484 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 RSAD2Q8WXG1 361 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 E2F7Q96AV8 911 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 LRRC3BQ96PB8 259 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 TSGA13Q96PP4 275 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 LGMNQ99538 433 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 SLC39A8Q9C0K1 460 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 RAB17Q9H0T7 212 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 C10orf88Q9H8K7 445 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 TBC1D30Q9Y2I9 924 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 REV3LO60673 3130 aa10.51□□□□□ -0.73
VIPAS39-201ENST00000327028 NUP205Q92621 2012 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 ARHGAP42A6NI28 874 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 RASA4BC9J798 803 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 BHMG1C9JSJ3 638 aaPredicted RBP10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 RASA4O43374 803 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 LUC7L3O95232 432 aaKnown RBP10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 CYBBP04839 570 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 VAV1P15498 845 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 HOXD9P28356 352 aaPredicted RBP10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 RBL1P28749 1068 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 GBP2P32456 591 aaPredicted RBP10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 GDF10P55107 478 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 SLC7A5Q01650 507 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 ELF2Q15723 593 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 ZNF783Q6ZMS7 281 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 FAM71DQ8N9W8 422 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 CCHCR1Q8TD31 782 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 OSCP1Q8WVF1 389 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 GUCD1Q96NT3 240 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 UBE2ZQ9H832 354 aaPredicted RBP10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 USP29Q9HBJ7 922 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 PCDH9Q9HC56 1237 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 DMGDHQ9UI17 866 aaKnown RBP10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 WNT6Q9Y6F9 365 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 ILVBLA1L0T0 632 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 HEPACAM2A8MVW5 462 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 KCNN4O15554 427 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 MTSS1O43312 755 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 PENKP01210 267 aaPredicted RBP10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 KRT14P02533 472 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 RHOCP08134 193 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 LAMP2P13473 410 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 FOSL2P15408 326 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 PAPOLAP51003 745 aaKnown RBP10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 NAA30Q147X3 362 aaPredicted RBP10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 FYB2Q5VWT5 728 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 HEATR6Q6AI08 1181 aaKnown RBP10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 CXorf57Q6NSI4 855 aaKnown RBP10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 B4GALNT4Q76KP1 1039 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 CCDC13Q8IYE1 715 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 CCDC89Q8N998 374 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 CCNYQ8ND76 341 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 DDI1Q8WTU0 396 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 HTR3CQ8WXA8 447 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 HMCESQ96FZ2 354 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 P2RY11Q96G91 374 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 FERMT1Q9BQL6 677 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 ERP44Q9BS26 406 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 MAGEH1Q9H213 219 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 ZFP14Q9HCL3 533 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 MARK1Q9P0L2 795 aa10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 UTP11Q9Y3A2 253 aaKnown RBP10.5□□□□□ -0.73
VIPAS39-201ENST00000327028 SHROOM3Q8TF72 1996 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 UQCRHLA0A096LP55 91 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 H3BQ06 376 aaPredicted RBP10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 UQCRHP07919 91 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 IFNAR2P48551 515 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 GNA12Q03113 381 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 AP1B1Q10567 949 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 SMAD4Q13485 552 aaKnown RBP10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 POLD3Q15054 466 aaPredicted RBP10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 HABP4Q5JVS0 413 aaKnown RBP10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 TPGS1Q6ZTW0 290 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 CARNMT1Q8N4J0 409 aa10.49□□□□□ -0.73
VIPAS39-201ENST00000327028 LRRN4Q8WUT4 740 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms