RNA–Protein interactions for RNA: ENST00000636721.1

CACNB4-231, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5 BASIC

Gene CACNB4, Length 1,542 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-231	ENST00000636721	NRXN3	Q9Y4C0	1643 aa		12.24	□□□□□ -0.45
CACNB4-231	ENST00000636721	TECPR2	O15040	1411 aa		12.24	□□□□□ -0.45
CACNB4-231	ENST00000636721	IL16	Q14005	1332 aa		12.24	□□□□□ -0.45
CACNB4-231	ENST00000636721	PNPLA6	Q8IY17	1366 aa		12.23	□□□□□ -0.45
CACNB4-231	ENST00000636721	FYB1	O15117	783 aa		12.23	□□□□□ -0.45
CACNB4-231	ENST00000636721	U2AF1L5	P0DN76	240 aa	Predicted RBP	12.23	□□□□□ -0.45
CACNB4-231	ENST00000636721	TNNT2	P45379	298 aa	Predicted RBP	12.23	□□□□□ -0.45
CACNB4-231	ENST00000636721	U2AF1	Q01081	240 aa	Known RBP eCLIP	12.23	□□□□□ -0.45
CACNB4-231	ENST00000636721	C20orf194	Q5TEA3	1177 aa		12.23	□□□□□ -0.45
CACNB4-231	ENST00000636721	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.23	□□□□□ -0.45
CACNB4-231	ENST00000636721	ZMYM3	Q14202	1370 aa		12.23	□□□□□ -0.45
CACNB4-231	ENST00000636721	MAP2	P11137	1827 aa	Known RBP	12.23	□□□□□ -0.45
CACNB4-231	ENST00000636721	SAFB2	Q14151	953 aa	Known RBP eCLIP	12.22	□□□□□ -0.45
CACNB4-231	ENST00000636721	CPS1	P31327	1500 aa		12.22	□□□□□ -0.45
CACNB4-231	ENST00000636721	UBR1	Q8IWV7	1749 aa		12.22	□□□□□ -0.45
CACNB4-231	ENST00000636721	ZBTB47	Q9UFB7	747 aa	Predicted RBP	12.21	□□□□□ -0.45
CACNB4-231	ENST00000636721	VIRMA	Q69YN4	1812 aa	Known RBP	12.21	□□□□□ -0.45
CACNB4-231	ENST00000636721	MAPK8IP3	Q9UPT6	1336 aa		12.21	□□□□□ -0.45
CACNB4-231	ENST00000636721	ITSN1	Q15811	1721 aa		12.21	□□□□□ -0.45
CACNB4-231	ENST00000636721	MON2	Q7Z3U7	1717 aa		12.21	□□□□□ -0.45
CACNB4-231	ENST00000636721	AKAP12	Q02952	1782 aa		12.21	□□□□□ -0.45
CACNB4-231	ENST00000636721	EDC4	Q6P2E9	1401 aa	Known RBP	12.21	□□□□□ -0.46
CACNB4-231	ENST00000636721	KCNA4	P22459	653 aa		12.21	□□□□□ -0.46
CACNB4-231	ENST00000636721	CANX	P27824	592 aa	Known RBP	12.21	□□□□□ -0.46
CACNB4-231	ENST00000636721	TNR	Q92752	1358 aa		12.2	□□□□□ -0.46
CACNB4-231	ENST00000636721	DIAPH1	O60610	1272 aa	Known RBP	12.2	□□□□□ -0.46
CACNB4-231	ENST00000636721	NEFM	P07197	916 aa		12.2	□□□□□ -0.46
CACNB4-231	ENST00000636721	RARS	P54136	660 aa	Known RBP	12.2	□□□□□ -0.46
CACNB4-231	ENST00000636721	DDRGK1	Q96HY6	314 aa		12.2	□□□□□ -0.46
CACNB4-231	ENST00000636721	BCAR3	O75815	825 aa		12.19	□□□□□ -0.46
CACNB4-231	ENST00000636721	FCHSD2	O94868	740 aa		12.19	□□□□□ -0.46
CACNB4-231	ENST00000636721	PMFBP1	Q8TBY8	1022 aa		12.19	□□□□□ -0.46
CACNB4-231	ENST00000636721	GGNBP2	Q9H3C7	697 aa		12.19	□□□□□ -0.46
CACNB4-231	ENST00000636721	CABP1	Q9NZU7	370 aa		12.19	□□□□□ -0.46
CACNB4-231	ENST00000636721	CPSF1	Q10570	1443 aa	Known RBP	12.19	□□□□□ -0.46
CACNB4-231	ENST00000636721	WASL	O00401	505 aa	Predicted RBP	12.18	□□□□□ -0.46
CACNB4-231	ENST00000636721	TMPO	P42166	694 aa	Known RBP	12.18	□□□□□ -0.46
CACNB4-231	ENST00000636721	CLUAP1	Q96AJ1	413 aa		12.18	□□□□□ -0.46
CACNB4-231	ENST00000636721	PLEKHF1	Q96S99	279 aa		12.18	□□□□□ -0.46
CACNB4-231	ENST00000636721	AATK	Q6ZMQ8	1374 aa		12.18	□□□□□ -0.46
CACNB4-231	ENST00000636721	NEUROD2	Q15784	382 aa		12.17	□□□□□ -0.46
CACNB4-231	ENST00000636721	ZNF428	Q96B54	188 aa		12.17	□□□□□ -0.46
CACNB4-231	ENST00000636721	ZNF692	Q9BU19	519 aa	Predicted RBP	12.17	□□□□□ -0.46
CACNB4-231	ENST00000636721	CALD1	Q05682	793 aa	Known RBP	12.16	□□□□□ -0.46
CACNB4-231	ENST00000636721	FAM161A	Q3B820	660 aa		12.16	□□□□□ -0.46
CACNB4-231	ENST00000636721	U2SURP	O15042	1029 aa	Known RBP	12.16	□□□□□ -0.46
CACNB4-231	ENST00000636721	MLEC	Q14165	292 aa		12.16	□□□□□ -0.46
CACNB4-231	ENST00000636721	RRP7A	Q9Y3A4	280 aa	Known RBP	12.16	□□□□□ -0.46
CACNB4-231	ENST00000636721	TMEM2	Q9UHN6	1383 aa		12.16	□□□□□ -0.46
CACNB4-231	ENST00000636721	CDK12	Q9NYV4	1490 aa	Predicted RBP	12.16	□□□□□ -0.46
CACNB4-231	ENST00000636721	PPIP5K1	Q6PFW1	1433 aa		12.15	□□□□□ -0.46
CACNB4-231	ENST00000636721	CCDC61	Q9Y6R9	512 aa		12.15	□□□□□ -0.46
CACNB4-231	ENST00000636721	C3	P01024	1663 aa		12.14	□□□□□ -0.47
CACNB4-231	ENST00000636721	ZKSCAN2	Q63HK3	967 aa		12.14	□□□□□ -0.47
CACNB4-231	ENST00000636721	PLEKHG1	Q9ULL1	1385 aa		12.13	□□□□□ -0.47
CACNB4-231	ENST00000636721	WAPL	Q7Z5K2	1190 aa		12.13	□□□□□ -0.47
CACNB4-231	ENST00000636721	MET	P08581	1390 aa		12.13	□□□□□ -0.47
CACNB4-231	ENST00000636721	CHMP4B	Q9H444	224 aa	Known RBP	12.12	□□□□□ -0.47
CACNB4-231	ENST00000636721	TRIM35	Q9UPQ4	493 aa		12.12	□□□□□ -0.47
CACNB4-231	ENST00000636721	TOPAZ1	Q8N9V7	1692 aa		12.12	□□□□□ -0.47
CACNB4-231	ENST00000636721	IPO8	O15397	1037 aa	Known RBP	12.11	□□□□□ -0.47
CACNB4-231	ENST00000636721	RIPK4	P57078	832 aa		12.11	□□□□□ -0.47
CACNB4-231	ENST00000636721	LMOD3	Q0VAK6	560 aa		12.11	□□□□□ -0.47
CACNB4-231	ENST00000636721	ALDH1L2	Q3SY69	923 aa		12.11	□□□□□ -0.47
CACNB4-231	ENST00000636721	FRAT1	Q92837	279 aa	Predicted RBP	12.11	□□□□□ -0.47
CACNB4-231	ENST00000636721	NUDT16	Q96DE0	195 aa	Known RBP	12.11	□□□□□ -0.47
CACNB4-231	ENST00000636721	RWDD1	Q9H446	243 aa	Predicted RBP	12.11	□□□□□ -0.47
CACNB4-231	ENST00000636721	POLK	Q9UBT6	870 aa		12.11	□□□□□ -0.47
CACNB4-231	ENST00000636721	COG6	Q9Y2V7	657 aa		12.11	□□□□□ -0.47
CACNB4-231	ENST00000636721	LRRC7	Q96NW7	1537 aa		12.11	□□□□□ -0.47
CACNB4-231	ENST00000636721	DIP2A	Q14689	1571 aa		12.11	□□□□□ -0.47
CACNB4-231	ENST00000636721	KIF16B	Q96L93	1317 aa		12.11	□□□□□ -0.47
CACNB4-231	ENST00000636721	BRPF1	P55201	1214 aa	Predicted RBP	12.11	□□□□□ -0.47
CACNB4-231	ENST00000636721	COG3	Q96JB2	828 aa		12.11	□□□□□ -0.47
CACNB4-231	ENST00000636721	SLIT1	O75093	1534 aa		12.1	□□□□□ -0.47
CACNB4-231	ENST00000636721	MVP	Q14764	893 aa	Known RBP	12.1	□□□□□ -0.47
CACNB4-231	ENST00000636721	DZIP1L	Q8IYY4	767 aa	Known RBP	12.1	□□□□□ -0.47
CACNB4-231	ENST00000636721	PANK1	Q8TE04	598 aa		12.1	□□□□□ -0.47
CACNB4-231	ENST00000636721	RSPH6A	Q9H0K4	717 aa		12.1	□□□□□ -0.47
CACNB4-231	ENST00000636721	ADAMTS13	Q76LX8	1427 aa		12.1	□□□□□ -0.47
CACNB4-231	ENST00000636721	RIMS1	Q86UR5	1692 aa	Known RBP	12.09	□□□□□ -0.47
CACNB4-231	ENST00000636721	FTSJ3	Q8IY81	847 aa	Known RBP	12.09	□□□□□ -0.47
CACNB4-231	ENST00000636721	DDX19B	Q9UMR2	479 aa		12.09	□□□□□ -0.47
CACNB4-231	ENST00000636721	EID1	Q9Y6B2	187 aa		12.09	□□□□□ -0.47
CACNB4-231	ENST00000636721	DLG5	Q8TDM6	1919 aa		12.09	□□□□□ -0.47
CACNB4-231	ENST00000636721	NRK	Q7Z2Y5	1582 aa		12.09	□□□□□ -0.47
CACNB4-231	ENST00000636721	PPM1G	O15355	546 aa	Predicted RBP	12.08	□□□□□ -0.48
CACNB4-231	ENST00000636721	NFE2L2	Q16236	605 aa		12.08	□□□□□ -0.48
CACNB4-231	ENST00000636721	TXNDC2	Q86VQ3	553 aa		12.08	□□□□□ -0.48
CACNB4-231	ENST00000636721	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	12.08	□□□□□ -0.48
CACNB4-231	ENST00000636721	FER1L4	A9Z1Z3	1794 aa		12.08	□□□□□ -0.48
CACNB4-231	ENST00000636721	ARHGAP23	Q9P227	1491 aa		12.08	□□□□□ -0.48
CACNB4-231	ENST00000636721	NALCN	Q8IZF0	1738 aa		12.08	□□□□□ -0.48
CACNB4-231	ENST00000636721	PLEKHG3	A1L390	1219 aa		12.07	□□□□□ -0.48
CACNB4-231	ENST00000636721	IGHD	P01880	384 aa		12.07	□□□□□ -0.48
CACNB4-231	ENST00000636721	HAP1	P54257	671 aa	Predicted RBP	12.07	□□□□□ -0.48
CACNB4-231	ENST00000636721	EXOSC9	Q06265	439 aa	Known RBP	12.07	□□□□□ -0.48
CACNB4-231	ENST00000636721	C8orf34	Q49A92	452 aa		12.07	□□□□□ -0.48
CACNB4-231	ENST00000636721	NPM2	Q86SE8	214 aa	Known RBP	12.07	□□□□□ -0.48
CACNB4-231	ENST00000636721	SMC4	Q9NTJ3	1288 aa		12.07	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms