RNA–Protein interactions for RNA: ENST00000636475.1

PCCA-213, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 5

Gene PCCA, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-213ENST00000636475 GGNBP2Q9H3C7 697 aa12.94□□□□□ -0.34
PCCA-213ENST00000636475 UBR1Q8IWV7 1749 aa12.93□□□□□ -0.34
PCCA-213ENST00000636475 CANXP27824 592 aaKnown RBP12.92□□□□□ -0.34
PCCA-213ENST00000636475 MLECQ14165 292 aa12.92□□□□□ -0.34
PCCA-213ENST00000636475 TNRQ92752 1358 aa12.92□□□□□ -0.34
PCCA-213ENST00000636475 NEUROD2Q15784 382 aa12.92□□□□□ -0.34
PCCA-213ENST00000636475 FBXO41Q8TF61 875 aa12.92□□□□□ -0.34
PCCA-213ENST00000636475 CABP1Q9NZU7 370 aa12.92□□□□□ -0.34
PCCA-213ENST00000636475 RRP7AQ9Y3A4 280 aaKnown RBP12.92□□□□□ -0.34
PCCA-213ENST00000636475 MAPK8IP3Q9UPT6 1336 aa12.91□□□□□ -0.34
PCCA-213ENST00000636475 LMTK3Q96Q04 1460 aa12.91□□□□□ -0.34
PCCA-213ENST00000636475 MON2Q7Z3U7 1717 aa12.91□□□□□ -0.34
PCCA-213ENST00000636475 PLEKHF1Q96S99 279 aa12.91□□□□□ -0.34
PCCA-213ENST00000636475 EDC4Q6P2E9 1401 aaKnown RBP12.91□□□□□ -0.34
PCCA-213ENST00000636475 IL16Q14005 1332 aa12.91□□□□□ -0.34
PCCA-213ENST00000636475 RARSP54136 660 aaKnown RBP12.9□□□□□ -0.34
PCCA-213ENST00000636475 CPSF1Q10570 1443 aaKnown RBP12.9□□□□□ -0.34
PCCA-213ENST00000636475 DIAPH1O60610 1272 aaKnown RBP12.9□□□□□ -0.34
PCCA-213ENST00000636475 ZBTB47Q9UFB7 747 aaPredicted RBP12.9□□□□□ -0.34
PCCA-213ENST00000636475 ITSN1Q15811 1721 aa12.9□□□□□ -0.34
PCCA-213ENST00000636475 AKAP12Q02952 1782 aa12.9□□□□□ -0.35
PCCA-213ENST00000636475 WASLO00401 505 aaPredicted RBP12.89□□□□□ -0.35
PCCA-213ENST00000636475 MAP2P11137 1827 aaKnown RBP12.89□□□□□ -0.35
PCCA-213ENST00000636475 RIMS1Q86UR5 1692 aaKnown RBP12.89□□□□□ -0.35
PCCA-213ENST00000636475 U2SURPO15042 1029 aaKnown RBP12.89□□□□□ -0.35
PCCA-213ENST00000636475 TMPOP42166 694 aaKnown RBP12.89□□□□□ -0.35
PCCA-213ENST00000636475 SENP3Q9H4L4 574 aaPredicted RBP12.89□□□□□ -0.35
PCCA-213ENST00000636475 METP08581 1390 aa12.88□□□□□ -0.35
PCCA-213ENST00000636475 TMEM2Q9UHN6 1383 aa12.88□□□□□ -0.35
PCCA-213ENST00000636475 PPIP5K1Q6PFW1 1433 aa12.88□□□□□ -0.35
PCCA-213ENST00000636475 WAPLQ7Z5K2 1190 aa12.88□□□□□ -0.35
PCCA-213ENST00000636475 CLUAP1Q96AJ1 413 aa12.88□□□□□ -0.35
PCCA-213ENST00000636475 VIRMAQ69YN4 1812 aaKnown RBP12.87□□□□□ -0.35
PCCA-213ENST00000636475 FCHSD2O94868 740 aa12.87□□□□□ -0.35
PCCA-213ENST00000636475 AATKQ6ZMQ8 1374 aa12.86□□□□□ -0.35
PCCA-213ENST00000636475 CDK12Q9NYV4 1490 aaPredicted RBP12.86□□□□□ -0.35
PCCA-213ENST00000636475 C3P01024 1663 aa12.86□□□□□ -0.35
PCCA-213ENST00000636475 LRRC7Q96NW7 1537 aa12.86□□□□□ -0.35
PCCA-213ENST00000636475 NEFMP07197 916 aa12.85□□□□□ -0.35
PCCA-213ENST00000636475 FAM161AQ3B820 660 aa12.85□□□□□ -0.35
PCCA-213ENST00000636475 PMFBP1Q8TBY8 1022 aa12.85□□□□□ -0.35
PCCA-213ENST00000636475 DDRGK1Q96HY6 314 aa12.85□□□□□ -0.35
PCCA-213ENST00000636475 FRAT1Q92837 279 aaPredicted RBP12.85□□□□□ -0.35
PCCA-213ENST00000636475 TRIM35Q9UPQ4 493 aa12.85□□□□□ -0.35
PCCA-213ENST00000636475 CCDC61Q9Y6R9 512 aa12.85□□□□□ -0.35
PCCA-213ENST00000636475 PLEKHG1Q9ULL1 1385 aa12.84□□□□□ -0.35
PCCA-213ENST00000636475 COG6Q9Y2V7 657 aa12.84□□□□□ -0.35
PCCA-213ENST00000636475 TOPAZ1Q8N9V7 1692 aa12.84□□□□□ -0.35
PCCA-213ENST00000636475 PANK1Q8TE04 598 aa12.83□□□□□ -0.35
PCCA-213ENST00000636475 ZNF692Q9BU19 519 aaPredicted RBP12.83□□□□□ -0.35
PCCA-213ENST00000636475 POLKQ9UBT6 870 aa12.83□□□□□ -0.35
PCCA-213ENST00000636475 ADAMTS13Q76LX8 1427 aa12.83□□□□□ -0.36
PCCA-213ENST00000636475 RIPK4P57078 832 aa12.83□□□□□ -0.36
PCCA-213ENST00000636475 ZKSCAN2Q63HK3 967 aa12.83□□□□□ -0.36
PCCA-213ENST00000636475 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.83□□□□□ -0.361e-6■■□□□ 13.6
PCCA-213ENST00000636475 NUDT16Q96DE0 195 aaKnown RBP12.83□□□□□ -0.36
PCCA-213ENST00000636475 FER1L4A9Z1Z3 1794 aa12.83□□□□□ -0.36
PCCA-213ENST00000636475 NPM2Q86SE8 214 aaKnown RBP12.82□□□□□ -0.36
PCCA-213ENST00000636475 TXNDC2Q86VQ3 553 aa12.82□□□□□ -0.36
PCCA-213ENST00000636475 PAK3O75914 559 aaPredicted RBP12.81□□□□□ -0.36
PCCA-213ENST00000636475 CALD1Q05682 793 aaKnown RBP12.81□□□□□ -0.36
PCCA-213ENST00000636475 ZNF428Q96B54 188 aa12.81□□□□□ -0.36
PCCA-213ENST00000636475 RSPH6AQ9H0K4 717 aa12.81□□□□□ -0.36
PCCA-213ENST00000636475 NRKQ7Z2Y5 1582 aa12.81□□□□□ -0.36
PCCA-213ENST00000636475 SLIT1O75093 1534 aa12.8□□□□□ -0.36
PCCA-213ENST00000636475 IGHDP01880 384 aa12.8□□□□□ -0.36
PCCA-213ENST00000636475 MVPQ14764 893 aaKnown RBP12.8□□□□□ -0.36
PCCA-213ENST00000636475 COG3Q96JB2 828 aa12.8□□□□□ -0.36
PCCA-213ENST00000636475 EXOSC9Q06265 439 aaKnown RBP12.8□□□□□ -0.36
PCCA-213ENST00000636475 C8orf34Q49A92 452 aa12.8□□□□□ -0.36
PCCA-213ENST00000636475 SKAP1Q86WV1 359 aa12.8□□□□□ -0.36
PCCA-213ENST00000636475 DIP2AQ14689 1571 aa12.79□□□□□ -0.36
PCCA-213ENST00000636475 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.79□□□□□ -0.36
PCCA-213ENST00000636475 ALDH1L2Q3SY69 923 aa12.79□□□□□ -0.36
PCCA-213ENST00000636475 FTSJ3Q8IY81 847 aaKnown RBP12.79□□□□□ -0.36
PCCA-213ENST00000636475 DZIP1LQ8IYY4 767 aaKnown RBP12.79□□□□□ -0.36
PCCA-213ENST00000636475 TSR2Q969E8 191 aaKnown RBP12.79□□□□□ -0.36
PCCA-213ENST00000636475 RWDD1Q9H446 243 aaPredicted RBP12.79□□□□□ -0.36
PCCA-213ENST00000636475 ARHGAP23Q9P227 1491 aa12.78□□□□□ -0.36
PCCA-213ENST00000636475 KIF16BQ96L93 1317 aa12.78□□□□□ -0.36
PCCA-213ENST00000636475 PRKAR2BP31323 418 aa12.78□□□□□ -0.36
PCCA-213ENST00000636475 RGS3P49796 1198 aa12.78□□□□□ -0.36
PCCA-213ENST00000636475 SMC4Q9NTJ3 1288 aa12.78□□□□□ -0.36
PCCA-213ENST00000636475 ROBO2Q9HCK4 1378 aa12.78□□□□□ -0.36
PCCA-213ENST00000636475 IPO8O15397 1037 aaKnown RBP12.78□□□□□ -0.36
PCCA-213ENST00000636475 RLBP1P12271 317 aa12.78□□□□□ -0.36
PCCA-213ENST00000636475 IL13P35225 146 aa12.78□□□□□ -0.36
PCCA-213ENST00000636475 LMOD3Q0VAK6 560 aa12.78□□□□□ -0.36
PCCA-213ENST00000636475 NFE2L2Q16236 605 aa12.78□□□□□ -0.36
PCCA-213ENST00000636475 NME9Q86XW9 330 aa12.78□□□□□ -0.36
PCCA-213ENST00000636475 BCL2L13Q9BXK5 485 aa12.78□□□□□ -0.36
PCCA-213ENST00000636475 NALCNQ8IZF0 1738 aa12.77□□□□□ -0.36
PCCA-213ENST00000636475 DDX19BQ9UMR2 479 aa12.77□□□□□ -0.37
PCCA-213ENST00000636475 EID1Q9Y6B2 187 aa12.77□□□□□ -0.37
PCCA-213ENST00000636475 PPM1GO15355 546 aaPredicted RBP12.76□□□□□ -0.37
PCCA-213ENST00000636475 BRPF1P55201 1214 aaPredicted RBP12.76□□□□□ -0.37
PCCA-213ENST00000636475 PTCH1Q13635 1447 aa12.76□□□□□ -0.37
PCCA-213ENST00000636475 DLG5Q8TDM6 1919 aa12.76□□□□□ -0.37
PCCA-213ENST00000636475 PLEKHG3A1L390 1219 aa12.76□□□□□ -0.37
PCCA-213ENST00000636475 ATF7IPQ6VMQ6 1270 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms