RNA–Protein interactions for RNA: ENST00000635729.1

ARHGEF9-220, Transcript of Cdc42 guanine nucleotide exchange factor 9, humanhuman

TSL 5 BASIC

Gene ARHGEF9, Length 1,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9-220ENST00000635729 FAM135BQ49AJ0 1406 aa17.31■□□□□ 0.36
ARHGEF9-220ENST00000635729 CANXP27824 592 aaKnown RBP17.31■□□□□ 0.36
ARHGEF9-220ENST00000635729 NEUROD2Q15784 382 aa17.31■□□□□ 0.36
ARHGEF9-220ENST00000635729 SPINK5Q9NQ38 1064 aaPredicted RBP17.31■□□□□ 0.36
ARHGEF9-220ENST00000635729 WASLO00401 505 aaPredicted RBP17.3■□□□□ 0.36
ARHGEF9-220ENST00000635729 DIAPH1O60610 1272 aaKnown RBP17.3■□□□□ 0.36
ARHGEF9-220ENST00000635729 ANKLE2Q86XL3 938 aa17.3■□□□□ 0.36
ARHGEF9-220ENST00000635729 C20orf194Q5TEA3 1177 aa17.3■□□□□ 0.36
ARHGEF9-220ENST00000635729 IQSEC2Q5JU85 1478 aa17.29■□□□□ 0.36
ARHGEF9-220ENST00000635729 ZNF692Q9BU19 519 aaPredicted RBP17.29■□□□□ 0.36
ARHGEF9-220ENST00000635729 U2SURPO15042 1029 aaKnown RBP17.28■□□□□ 0.36
ARHGEF9-220ENST00000635729 SENP3Q9H4L4 574 aaPredicted RBP17.28■□□□□ 0.36
ARHGEF9-220ENST00000635729 IL16Q14005 1332 aa17.28■□□□□ 0.36
ARHGEF9-220ENST00000635729 CD163L1Q9NR16 1453 aa17.28■□□□□ 0.36
ARHGEF9-220ENST00000635729 FCHSD2O94868 740 aa17.28■□□□□ 0.36
ARHGEF9-220ENST00000635729 WAPLQ7Z5K2 1190 aa17.28■□□□□ 0.36
ARHGEF9-220ENST00000635729 PNPLA6Q8IY17 1366 aa17.27■□□□□ 0.36
ARHGEF9-220ENST00000635729 PDE4AP27815 886 aa17.27■□□□□ 0.35
ARHGEF9-220ENST00000635729 CCDC61Q9Y6R9 512 aa17.27■□□□□ 0.35
ARHGEF9-220ENST00000635729 KDM2BQ8NHM5 1336 aa17.27■□□□□ 0.35
ARHGEF9-220ENST00000635729 BCAR3O75815 825 aa17.26■□□□□ 0.35
ARHGEF9-220ENST00000635729 RRP7AQ9Y3A4 280 aaKnown RBP17.26■□□□□ 0.35
ARHGEF9-220ENST00000635729 ANKRD26Q9UPS8 1709 aa17.26■□□□□ 0.35
ARHGEF9-220ENST00000635729 TMEM2Q9UHN6 1383 aa17.26■□□□□ 0.35
ARHGEF9-220ENST00000635729 TECPR2O15040 1411 aa17.26■□□□□ 0.35
ARHGEF9-220ENST00000635729 RARSP54136 660 aaKnown RBP17.25■□□□□ 0.35
ARHGEF9-220ENST00000635729 IPO9Q96P70 1041 aaKnown RBP17.25■□□□□ 0.35
ARHGEF9-220ENST00000635729 BACH2Q9BYV9 841 aa17.25■□□□□ 0.35
ARHGEF9-220ENST00000635729 MSH5O43196 834 aa17.25■□□□□ 0.35
ARHGEF9-220ENST00000635729 NPHP4O75161 1426 aaPredicted RBP17.24■□□□□ 0.35
ARHGEF9-220ENST00000635729 EDC4Q6P2E9 1401 aaKnown RBP17.24■□□□□ 0.35
ARHGEF9-220ENST00000635729 TMPOP42166 694 aaKnown RBP17.24■□□□□ 0.35
ARHGEF9-220ENST00000635729 PLEKHF1Q96S99 279 aa17.24■□□□□ 0.35
ARHGEF9-220ENST00000635729 EID1Q9Y6B2 187 aa17.24■□□□□ 0.35
ARHGEF9-220ENST00000635729 UBR1Q8IWV7 1749 aa17.24■□□□□ 0.35
ARHGEF9-220ENST00000635729 CALD1Q05682 793 aaKnown RBP17.23■□□□□ 0.35
ARHGEF9-220ENST00000635729 TXNDC2Q86VQ3 553 aa17.23■□□□□ 0.35
ARHGEF9-220ENST00000635729 NUDT16Q96DE0 195 aaKnown RBP17.23■□□□□ 0.35
ARHGEF9-220ENST00000635729 METP08581 1390 aa17.22■□□□□ 0.35
ARHGEF9-220ENST00000635729 CPSF1Q10570 1443 aaKnown RBP17.22■□□□□ 0.35
ARHGEF9-220ENST00000635729 ZBTB47Q9UFB7 747 aaPredicted RBP17.22■□□□□ 0.35
ARHGEF9-220ENST00000635729 NOP58Q9Y2X3 529 aaKnown RBP17.22■□□□□ 0.35
ARHGEF9-220ENST00000635729 SETD1AO15047 1707 aaKnown RBP17.21■□□□□ 0.35
ARHGEF9-220ENST00000635729 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.21■□□□□ 0.35
ARHGEF9-220ENST00000635729 PMFBP1Q8TBY8 1022 aa17.21■□□□□ 0.35
ARHGEF9-220ENST00000635729 ADGRB2O60241 1585 aa17.21■□□□□ 0.35
ARHGEF9-220ENST00000635729 PPIP5K1Q6PFW1 1433 aa17.21■□□□□ 0.34
ARHGEF9-220ENST00000635729 UBAP1LF5GYI3 381 aa17.2■□□□□ 0.34
ARHGEF9-220ENST00000635729 COG3Q96JB2 828 aa17.2■□□□□ 0.34
ARHGEF9-220ENST00000635729 COL3A1P02461 1466 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF9-220ENST00000635729 AATKQ6ZMQ8 1374 aa17.2■□□□□ 0.34
ARHGEF9-220ENST00000635729 PLEKHG1Q9ULL1 1385 aa17.2■□□□□ 0.34
ARHGEF9-220ENST00000635729 CLUAP1Q96AJ1 413 aa17.2■□□□□ 0.34
ARHGEF9-220ENST00000635729 KNDC1Q76NI1 1749 aa17.19■□□□□ 0.34
ARHGEF9-220ENST00000635729 RIPK4P57078 832 aa17.19■□□□□ 0.34
ARHGEF9-220ENST00000635729 FRAT1Q92837 279 aaPredicted RBP17.19■□□□□ 0.34
ARHGEF9-220ENST00000635729 ZNF428Q96B54 188 aa17.19■□□□□ 0.34
ARHGEF9-220ENST00000635729 POLKQ9UBT6 870 aa17.19■□□□□ 0.34
ARHGEF9-220ENST00000635729 KIF20BQ96Q89 1820 aa17.18■□□□□ 0.34
ARHGEF9-220ENST00000635729 LTKP29376 864 aa17.18■□□□□ 0.34
ARHGEF9-220ENST00000635729 CPS1P31327 1500 aa17.18■□□□□ 0.34
ARHGEF9-220ENST00000635729 ARHGAP23Q9P227 1491 aa17.17■□□□□ 0.34
ARHGEF9-220ENST00000635729 NRXN3Q9Y4C0 1643 aa17.17■□□□□ 0.34
ARHGEF9-220ENST00000635729 ZKSCAN2Q63HK3 967 aa17.17■□□□□ 0.34
ARHGEF9-220ENST00000635729 DDRGK1Q96HY6 314 aa17.17■□□□□ 0.34
ARHGEF9-220ENST00000635729 SLIT1O75093 1534 aa17.16■□□□□ 0.34
ARHGEF9-220ENST00000635729 IPO8O15397 1037 aaKnown RBP17.16■□□□□ 0.34
ARHGEF9-220ENST00000635729 CDC42BPGQ6DT37 1551 aa17.16■□□□□ 0.34
ARHGEF9-220ENST00000635729 LMOD3Q0VAK6 560 aa17.15■□□□□ 0.34
ARHGEF9-220ENST00000635729 TRIM35Q9UPQ4 493 aa17.15■□□□□ 0.34
ARHGEF9-220ENST00000635729 PPM1GO15355 546 aaPredicted RBP17.15■□□□□ 0.34
ARHGEF9-220ENST00000635729 FAM161AQ3B820 660 aa17.15■□□□□ 0.34
ARHGEF9-220ENST00000635729 COG6Q9Y2V7 657 aa17.15■□□□□ 0.34
ARHGEF9-220ENST00000635729 RWDD1Q9H446 243 aaPredicted RBP17.14■□□□□ 0.33
ARHGEF9-220ENST00000635729 TBX22Q9Y458 520 aa17.14■□□□□ 0.33
ARHGEF9-220ENST00000635729 FTSJ3Q8IY81 847 aaKnown RBP17.13■□□□□ 0.33
ARHGEF9-220ENST00000635729 PANK1Q8TE04 598 aa17.13■□□□□ 0.33
ARHGEF9-220ENST00000635729 STRCP1A6NGW2 1772 aa17.13■□□□□ 0.33
ARHGEF9-220ENST00000635729 PLEKHG3A1L390 1219 aa17.12■□□□□ 0.33
ARHGEF9-220ENST00000635729 CHMP4BQ9H444 224 aaKnown RBP17.12■□□□□ 0.33
ARHGEF9-220ENST00000635729 NFE2L2Q16236 605 aa17.12■□□□□ 0.33
ARHGEF9-220ENST00000635729 ALDH1L2Q3SY69 923 aa17.12■□□□□ 0.33
ARHGEF9-220ENST00000635729 DZIP1LQ8IYY4 767 aaKnown RBP17.12■□□□□ 0.33
ARHGEF9-220ENST00000635729 RSPH6AQ9H0K4 717 aa17.12■□□□□ 0.33
ARHGEF9-220ENST00000635729 ADAMTS13Q76LX8 1427 aa17.12■□□□□ 0.33
ARHGEF9-220ENST00000635729 CDK12Q9NYV4 1490 aaPredicted RBP17.11■□□□□ 0.33
ARHGEF9-220ENST00000635729 PRKAR2BP31323 418 aa17.11■□□□□ 0.33
ARHGEF9-220ENST00000635729 SMC4Q9NTJ3 1288 aa17.11■□□□□ 0.33
ARHGEF9-220ENST00000635729 KIF16BQ96L93 1317 aa17.11■□□□□ 0.33
ARHGEF9-220ENST00000635729 EXOSC9Q06265 439 aaKnown RBP17.1■□□□□ 0.33
ARHGEF9-220ENST00000635729 NME9Q86XW9 330 aa17.1■□□□□ 0.33
ARHGEF9-220ENST00000635729 IL13P35225 146 aa17.1■□□□□ 0.33
ARHGEF9-220ENST00000635729 MVPQ14764 893 aaKnown RBP17.1■□□□□ 0.33
ARHGEF9-220ENST00000635729 GNAI1P63096 354 aa17.09■□□□□ 0.33
ARHGEF9-220ENST00000635729 PIP4K2BP78356 416 aa17.09■□□□□ 0.33
ARHGEF9-220ENST00000635729 DDX19BQ9UMR2 479 aa17.09■□□□□ 0.33
ARHGEF9-220ENST00000635729 ROBO2Q9HCK4 1378 aa17.08■□□□□ 0.33
ARHGEF9-220ENST00000635729 TOM1O60784 492 aa17.08■□□□□ 0.33
ARHGEF9-220ENST00000635729 LRRC7Q96NW7 1537 aa17.08■□□□□ 0.32
ARHGEF9-220ENST00000635729 HAP1P54257 671 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms