RNA–Protein interactions for RNA: ENST00000619045.1

DHFR2-206, Transcript of dihydrofolate reductase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR2, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-206ENST00000619045 TSPOAP1O95153 1857 aa12.74□□□□□ -0.37
DHFR2-206ENST00000619045 CLUAP1Q96AJ1 413 aa12.74□□□□□ -0.37
DHFR2-206ENST00000619045 DDRGK1Q96HY6 314 aa12.74□□□□□ -0.37
DHFR2-206ENST00000619045 NRXN3Q9Y4C0 1643 aa12.73□□□□□ -0.37
DHFR2-206ENST00000619045 SAFB2Q14151 953 aaKnown RBP eCLIP12.73□□□□□ -0.37
DHFR2-206ENST00000619045 FAM161AQ3B820 660 aa12.73□□□□□ -0.37
DHFR2-206ENST00000619045 CPSF1Q10570 1443 aaKnown RBP12.73□□□□□ -0.37
DHFR2-206ENST00000619045 TMPOP42166 694 aaKnown RBP12.72□□□□□ -0.37
DHFR2-206ENST00000619045 PMFBP1Q8TBY8 1022 aa12.72□□□□□ -0.37
DHFR2-206ENST00000619045 GGNBP2Q9H3C7 697 aa12.72□□□□□ -0.37
DHFR2-206ENST00000619045 EDC4Q6P2E9 1401 aaKnown RBP12.71□□□□□ -0.37
DHFR2-206ENST00000619045 MAPK8IP3Q9UPT6 1336 aa12.71□□□□□ -0.37
DHFR2-206ENST00000619045 DIAPH1O60610 1272 aaKnown RBP12.71□□□□□ -0.38
DHFR2-206ENST00000619045 PAK3O75914 559 aaPredicted RBP12.71□□□□□ -0.38
DHFR2-206ENST00000619045 FCHSD2O94868 740 aa12.71□□□□□ -0.38
DHFR2-206ENST00000619045 CABP1Q9NZU7 370 aa12.71□□□□□ -0.38
DHFR2-206ENST00000619045 CPS1P31327 1500 aa12.7□□□□□ -0.38
DHFR2-206ENST00000619045 AATKQ6ZMQ8 1374 aa12.7□□□□□ -0.38
DHFR2-206ENST00000619045 CANXP27824 592 aaKnown RBP12.7□□□□□ -0.38
DHFR2-206ENST00000619045 RRP7AQ9Y3A4 280 aaKnown RBP12.7□□□□□ -0.38
DHFR2-206ENST00000619045 KIF13AQ9H1H9 1805 aa12.7□□□□□ -0.38
DHFR2-206ENST00000619045 WASLO00401 505 aaPredicted RBP12.69□□□□□ -0.38
DHFR2-206ENST00000619045 NEUROD2Q15784 382 aa12.69□□□□□ -0.38
DHFR2-206ENST00000619045 C8orf34Q49A92 452 aa12.69□□□□□ -0.38
DHFR2-206ENST00000619045 ZNF428Q96B54 188 aa12.69□□□□□ -0.38
DHFR2-206ENST00000619045 PPIP5K1Q6PFW1 1433 aa12.68□□□□□ -0.38
DHFR2-206ENST00000619045 TRIM35Q9UPQ4 493 aa12.68□□□□□ -0.38
DHFR2-206ENST00000619045 TNRQ92752 1358 aa12.68□□□□□ -0.38
DHFR2-206ENST00000619045 ESF1Q9H501 851 aaKnown RBP12.67□□□□□ -0.38
DHFR2-206ENST00000619045 CDK12Q9NYV4 1490 aaPredicted RBP12.67□□□□□ -0.38
DHFR2-206ENST00000619045 BRPF1P55201 1214 aaPredicted RBP12.67□□□□□ -0.38
DHFR2-206ENST00000619045 PANK1Q8TE04 598 aa12.67□□□□□ -0.38
DHFR2-206ENST00000619045 COG6Q9Y2V7 657 aa12.67□□□□□ -0.38
DHFR2-206ENST00000619045 TMEM2Q9UHN6 1383 aa12.66□□□□□ -0.38
DHFR2-206ENST00000619045 U2SURPO15042 1029 aaKnown RBP12.66□□□□□ -0.38
DHFR2-206ENST00000619045 ZKSCAN2Q63HK3 967 aa12.66□□□□□ -0.38
DHFR2-206ENST00000619045 ZNF692Q9BU19 519 aaPredicted RBP12.66□□□□□ -0.38
DHFR2-206ENST00000619045 METP08581 1390 aa12.66□□□□□ -0.38
DHFR2-206ENST00000619045 IGHDP01880 384 aa12.65□□□□□ -0.38
DHFR2-206ENST00000619045 WAPLQ7Z5K2 1190 aa12.65□□□□□ -0.38
DHFR2-206ENST00000619045 USP35Q9P2H5 1018 aa12.65□□□□□ -0.38
DHFR2-206ENST00000619045 POLKQ9UBT6 870 aa12.65□□□□□ -0.38
DHFR2-206ENST00000619045 CCDC61Q9Y6R9 512 aa12.65□□□□□ -0.38
DHFR2-206ENST00000619045 MON2Q7Z3U7 1717 aa12.65□□□□□ -0.38
DHFR2-206ENST00000619045 CALD1Q05682 793 aaKnown RBP12.65□□□□□ -0.39
DHFR2-206ENST00000619045 MVPQ14764 893 aaKnown RBP12.65□□□□□ -0.39
DHFR2-206ENST00000619045 VIRMAQ69YN4 1812 aaKnown RBP12.64□□□□□ -0.39
DHFR2-206ENST00000619045 ALDH1L2Q3SY69 923 aa12.64□□□□□ -0.39
DHFR2-206ENST00000619045 FRAT1Q92837 279 aaPredicted RBP12.64□□□□□ -0.39
DHFR2-206ENST00000619045 RSPH6AQ9H0K4 717 aa12.64□□□□□ -0.39
DHFR2-206ENST00000619045 RWDD1Q9H446 243 aaPredicted RBP12.64□□□□□ -0.39
DHFR2-206ENST00000619045 UBR1Q8IWV7 1749 aa12.64□□□□□ -0.39
DHFR2-206ENST00000619045 LRRC7Q96NW7 1537 aa12.63□□□□□ -0.39
DHFR2-206ENST00000619045 PPM1GO15355 546 aaPredicted RBP12.63□□□□□ -0.39
DHFR2-206ENST00000619045 NEFMP07197 916 aa12.63□□□□□ -0.39
DHFR2-206ENST00000619045 RLBP1P12271 317 aa12.63□□□□□ -0.39
DHFR2-206ENST00000619045 RIPK4P57078 832 aa12.63□□□□□ -0.39
DHFR2-206ENST00000619045 DZIP1LQ8IYY4 767 aaKnown RBP12.63□□□□□ -0.39
DHFR2-206ENST00000619045 AKAP12Q02952 1782 aa12.63□□□□□ -0.39
DHFR2-206ENST00000619045 PLEKHG1Q9ULL1 1385 aa12.63□□□□□ -0.39
DHFR2-206ENST00000619045 KIF16BQ96L93 1317 aa12.63□□□□□ -0.39
DHFR2-206ENST00000619045 NPM2Q86SE8 214 aaKnown RBP12.62□□□□□ -0.39
DHFR2-206ENST00000619045 IPO8O15397 1037 aaKnown RBP12.62□□□□□ -0.39
DHFR2-206ENST00000619045 NUDT16Q96DE0 195 aaKnown RBP12.62□□□□□ -0.39
DHFR2-206ENST00000619045 DDX19BQ9UMR2 479 aa12.62□□□□□ -0.39
DHFR2-206ENST00000619045 ADAMTS13Q76LX8 1427 aa12.61□□□□□ -0.39
DHFR2-206ENST00000619045 C3P01024 1663 aa12.61□□□□□ -0.39
DHFR2-206ENST00000619045 MAP2P11137 1827 aaKnown RBP12.61□□□□□ -0.39
DHFR2-206ENST00000619045 EXOSC9Q06265 439 aaKnown RBP12.61□□□□□ -0.39
DHFR2-206ENST00000619045 MLECQ14165 292 aa12.61□□□□□ -0.39
DHFR2-206ENST00000619045 ATF7IPQ6VMQ6 1270 aa12.61□□□□□ -0.39
DHFR2-206ENST00000619045 SKAP1Q86WV1 359 aa12.61□□□□□ -0.39
DHFR2-206ENST00000619045 IL13P35225 146 aa12.6□□□□□ -0.39
DHFR2-206ENST00000619045 HDAC1Q13547 482 aaPredicted RBP12.6□□□□□ -0.39
DHFR2-206ENST00000619045 NFE2L2Q16236 605 aa12.6□□□□□ -0.39
DHFR2-206ENST00000619045 FTSJ3Q8IY81 847 aaKnown RBP12.6□□□□□ -0.39
DHFR2-206ENST00000619045 ARXQ96QS3 562 aa12.6□□□□□ -0.39
DHFR2-206ENST00000619045 PCDHB15Q9Y5E8 787 aa12.6□□□□□ -0.39
DHFR2-206ENST00000619045 RGS3P49796 1198 aa12.6□□□□□ -0.39
DHFR2-206ENST00000619045 LMOD3Q0VAK6 560 aa12.6□□□□□ -0.39
DHFR2-206ENST00000619045 SMC4Q9NTJ3 1288 aa12.6□□□□□ -0.39
DHFR2-206ENST00000619045 SSH1Q8WYL5 1049 aa12.59□□□□□ -0.39
DHFR2-206ENST00000619045 COG3Q96JB2 828 aa12.59□□□□□ -0.39
DHFR2-206ENST00000619045 CHMP4BQ9H444 224 aaKnown RBP12.59□□□□□ -0.39
DHFR2-206ENST00000619045 ITSN1Q15811 1721 aa12.58□□□□□ -0.39
DHFR2-206ENST00000619045 PLEKHG3A1L390 1219 aa12.58□□□□□ -0.4
DHFR2-206ENST00000619045 TRIM27P14373 513 aa12.58□□□□□ -0.4
DHFR2-206ENST00000619045 PRKAR2BP31323 418 aa12.58□□□□□ -0.4
DHFR2-206ENST00000619045 RTL5Q5HYW3 569 aaPredicted RBP12.58□□□□□ -0.4
DHFR2-206ENST00000619045 TXNDC2Q86VQ3 553 aa12.58□□□□□ -0.4
DHFR2-206ENST00000619045 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.58□□□□□ -0.4
DHFR2-206ENST00000619045 ARHGAP45Q92619 1136 aa12.58□□□□□ -0.4
DHFR2-206ENST00000619045 TSR2Q969E8 191 aaKnown RBP12.58□□□□□ -0.4
DHFR2-206ENST00000619045 IFT57Q9NWB7 429 aa12.58□□□□□ -0.4
DHFR2-206ENST00000619045 TOPAZ1Q8N9V7 1692 aa12.58□□□□□ -0.4
DHFR2-206ENST00000619045 SLIT1O75093 1534 aa12.58□□□□□ -0.4
DHFR2-206ENST00000619045 ARHGAP23Q9P227 1491 aa12.57□□□□□ -0.4
DHFR2-206ENST00000619045 NRKQ7Z2Y5 1582 aa12.57□□□□□ -0.4
DHFR2-206ENST00000619045 ZNF853P0CG23 659 aa12.57□□□□□ -0.4
DHFR2-206ENST00000619045 BCL2L13Q9BXK5 485 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms