RNA–Protein interactions for RNA: ENST00000560588.5

RMDN3-209, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 2

Gene RMDN3, Length 2,202 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-209ENST00000560588 RRP7AQ9Y3A4 280 aaKnown RBP13.31□□□□□ -0.28
RMDN3-209ENST00000560588 ZMYM3Q14202 1370 aa13.31□□□□□ -0.28
RMDN3-209ENST00000560588 DIAPH1O60610 1272 aaKnown RBP13.31□□□□□ -0.28
RMDN3-209ENST00000560588 FAM161AQ3B820 660 aa13.31□□□□□ -0.28
RMDN3-209ENST00000560588 PMFBP1Q8TBY8 1022 aa13.31□□□□□ -0.28
RMDN3-209ENST00000560588 CLUAP1Q96AJ1 413 aa13.31□□□□□ -0.28
RMDN3-209ENST00000560588 PLEKHF1Q96S99 279 aa13.31□□□□□ -0.28
RMDN3-209ENST00000560588 CABP1Q9NZU7 370 aa13.3□□□□□ -0.28
RMDN3-209ENST00000560588 EDC4Q6P2E9 1401 aaKnown RBP13.3□□□□□ -0.28
RMDN3-209ENST00000560588 CPS1P31327 1500 aa13.29□□□□□ -0.28
RMDN3-209ENST00000560588 TNRQ92752 1358 aa13.29□□□□□ -0.28
RMDN3-209ENST00000560588 U2SURPO15042 1029 aaKnown RBP13.29□□□□□ -0.28
RMDN3-209ENST00000560588 TMPOP42166 694 aaKnown RBP13.29□□□□□ -0.28
RMDN3-209ENST00000560588 CPSF1Q10570 1443 aaKnown RBP13.28□□□□□ -0.28
RMDN3-209ENST00000560588 WASLO00401 505 aaPredicted RBP13.28□□□□□ -0.28
RMDN3-209ENST00000560588 FCHSD2O94868 740 aa13.28□□□□□ -0.28
RMDN3-209ENST00000560588 NEFMP07197 916 aa13.27□□□□□ -0.28
RMDN3-209ENST00000560588 PAK3O75914 559 aaPredicted RBP13.27□□□□□ -0.29
RMDN3-209ENST00000560588 MLECQ14165 292 aa13.27□□□□□ -0.29
RMDN3-209ENST00000560588 NPM2Q86SE8 214 aaKnown RBP13.27□□□□□ -0.29
RMDN3-209ENST00000560588 AATKQ6ZMQ8 1374 aa13.26□□□□□ -0.29
RMDN3-209ENST00000560588 MON2Q7Z3U7 1717 aa13.26□□□□□ -0.29
RMDN3-209ENST00000560588 UBR1Q8IWV7 1749 aa13.26□□□□□ -0.29
RMDN3-209ENST00000560588 VIRMAQ69YN4 1812 aaKnown RBP13.26□□□□□ -0.29
RMDN3-209ENST00000560588 CALD1Q05682 793 aaKnown RBP13.25□□□□□ -0.29
RMDN3-209ENST00000560588 ZKSCAN2Q63HK3 967 aa13.25□□□□□ -0.29
RMDN3-209ENST00000560588 PANK1Q8TE04 598 aa13.25□□□□□ -0.29
RMDN3-209ENST00000560588 FRAT1Q92837 279 aaPredicted RBP13.25□□□□□ -0.29
RMDN3-209ENST00000560588 PPIP5K1Q6PFW1 1433 aa13.25□□□□□ -0.29
RMDN3-209ENST00000560588 CDK12Q9NYV4 1490 aaPredicted RBP13.25□□□□□ -0.29
RMDN3-209ENST00000560588 AKAP12Q02952 1782 aa13.25□□□□□ -0.29
RMDN3-209ENST00000560588 ITSN1Q15811 1721 aa13.25□□□□□ -0.29
RMDN3-209ENST00000560588 WAPLQ7Z5K2 1190 aa13.25□□□□□ -0.29
RMDN3-209ENST00000560588 COG6Q9Y2V7 657 aa13.25□□□□□ -0.29
RMDN3-209ENST00000560588 TMEM2Q9UHN6 1383 aa13.25□□□□□ -0.29
RMDN3-209ENST00000560588 ZNF428Q96B54 188 aa13.24□□□□□ -0.29
RMDN3-209ENST00000560588 TRIM35Q9UPQ4 493 aa13.24□□□□□ -0.29
RMDN3-209ENST00000560588 ZNF692Q9BU19 519 aaPredicted RBP13.24□□□□□ -0.29
RMDN3-209ENST00000560588 RWDD1Q9H446 243 aaPredicted RBP13.24□□□□□ -0.29
RMDN3-209ENST00000560588 METP08581 1390 aa13.24□□□□□ -0.29
RMDN3-209ENST00000560588 RIPK4P57078 832 aa13.23□□□□□ -0.29
RMDN3-209ENST00000560588 MAP2P11137 1827 aaKnown RBP13.23□□□□□ -0.29
RMDN3-209ENST00000560588 C8orf34Q49A92 452 aa13.23□□□□□ -0.29
RMDN3-209ENST00000560588 POLKQ9UBT6 870 aa13.23□□□□□ -0.29
RMDN3-209ENST00000560588 CCDC61Q9Y6R9 512 aa13.23□□□□□ -0.29
RMDN3-209ENST00000560588 LRRC7Q96NW7 1537 aa13.22□□□□□ -0.29
RMDN3-209ENST00000560588 PPM1GO15355 546 aaPredicted RBP13.22□□□□□ -0.29
RMDN3-209ENST00000560588 MVPQ14764 893 aaKnown RBP13.22□□□□□ -0.29
RMDN3-209ENST00000560588 NUDT16Q96DE0 195 aaKnown RBP13.22□□□□□ -0.29
RMDN3-209ENST00000560588 PLEKHG1Q9ULL1 1385 aa13.21□□□□□ -0.29
RMDN3-209ENST00000560588 IPO8O15397 1037 aaKnown RBP13.21□□□□□ -0.29
RMDN3-209ENST00000560588 IGHDP01880 384 aa13.21□□□□□ -0.29
RMDN3-209ENST00000560588 FTSJ3Q8IY81 847 aaKnown RBP13.21□□□□□ -0.29
RMDN3-209ENST00000560588 DZIP1LQ8IYY4 767 aaKnown RBP13.21□□□□□ -0.29
RMDN3-209ENST00000560588 SENP3Q9H4L4 574 aaPredicted RBP13.21□□□□□ -0.29
RMDN3-209ENST00000560588 ALDH1L2Q3SY69 923 aa13.21□□□□□ -0.29
RMDN3-209ENST00000560588 RSPH6AQ9H0K4 717 aa13.21□□□□□ -0.29
RMDN3-209ENST00000560588 C3P01024 1663 aa13.21□□□□□ -0.3
RMDN3-209ENST00000560588 RGS3P49796 1198 aa13.2□□□□□ -0.3
RMDN3-209ENST00000560588 EXOSC9Q06265 439 aaKnown RBP13.2□□□□□ -0.3
RMDN3-209ENST00000560588 RTL5Q5HYW3 569 aaPredicted RBP13.2□□□□□ -0.3
RMDN3-209ENST00000560588 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.2□□□□□ -0.3
RMDN3-209ENST00000560588 SMC4Q9NTJ3 1288 aa13.2□□□□□ -0.3
RMDN3-209ENST00000560588 KIF16BQ96L93 1317 aa13.2□□□□□ -0.3
RMDN3-209ENST00000560588 LMOD3Q0VAK6 560 aa13.2□□□□□ -0.3
RMDN3-209ENST00000560588 NFE2L2Q16236 605 aa13.2□□□□□ -0.3
RMDN3-209ENST00000560588 COG3Q96JB2 828 aa13.2□□□□□ -0.3
RMDN3-209ENST00000560588 TXNDC2Q86VQ3 553 aa13.19□□□□□ -0.3
RMDN3-209ENST00000560588 USP35Q9P2H5 1018 aa13.19□□□□□ -0.3
RMDN3-209ENST00000560588 DDX19BQ9UMR2 479 aa13.19□□□□□ -0.3
RMDN3-209ENST00000560588 BRPF1P55201 1214 aaPredicted RBP13.19□□□□□ -0.3
RMDN3-209ENST00000560588 SKAP1Q86WV1 359 aa13.19□□□□□ -0.3
RMDN3-209ENST00000560588 CHMP4BQ9H444 224 aaKnown RBP13.19□□□□□ -0.3
RMDN3-209ENST00000560588 DAXXQ9UER7 740 aaPredicted RBP13.19□□□□□ -0.3
RMDN3-209ENST00000560588 TOPAZ1Q8N9V7 1692 aa13.18□□□□□ -0.3
RMDN3-209ENST00000560588 RLBP1P12271 317 aa13.18□□□□□ -0.3
RMDN3-209ENST00000560588 ADAMTS13Q76LX8 1427 aa13.18□□□□□ -0.3
RMDN3-209ENST00000560588 PRKAR2BP31323 418 aa13.17□□□□□ -0.3
RMDN3-209ENST00000560588 ATF7IPQ6VMQ6 1270 aa13.17□□□□□ -0.3
RMDN3-209ENST00000560588 TSR2Q969E8 191 aaKnown RBP13.17□□□□□ -0.3
RMDN3-209ENST00000560588 NRKQ7Z2Y5 1582 aa13.17□□□□□ -0.3
RMDN3-209ENST00000560588 IL13P35225 146 aa13.17□□□□□ -0.3
RMDN3-209ENST00000560588 SSH1Q8WYL5 1049 aa13.16□□□□□ -0.3
RMDN3-209ENST00000560588 PCDHB15Q9Y5E8 787 aa13.16□□□□□ -0.3
RMDN3-209ENST00000560588 GNAI1P63096 354 aa13.16□□□□□ -0.3
RMDN3-209ENST00000560588 HDAC1Q13547 482 aaPredicted RBP13.16□□□□□ -0.3
RMDN3-209ENST00000560588 BCL2L13Q9BXK5 485 aa13.16□□□□□ -0.3
RMDN3-209ENST00000560588 IFT57Q9NWB7 429 aa13.16□□□□□ -0.3
RMDN3-209ENST00000560588 DIP2AQ14689 1571 aa13.16□□□□□ -0.3
RMDN3-209ENST00000560588 PLEKHG3A1L390 1219 aa13.15□□□□□ -0.3
RMDN3-209ENST00000560588 SLIT1O75093 1534 aa13.15□□□□□ -0.3
RMDN3-209ENST00000560588 NME9Q86XW9 330 aa13.15□□□□□ -0.3
RMDN3-209ENST00000560588 EID1Q9Y6B2 187 aa13.15□□□□□ -0.3
RMDN3-209ENST00000560588 ROBO2Q9HCK4 1378 aa13.14□□□□□ -0.31
RMDN3-209ENST00000560588 ARHGAP23Q9P227 1491 aa13.14□□□□□ -0.31
RMDN3-209ENST00000560588 TRIM27P14373 513 aa13.13□□□□□ -0.31
RMDN3-209ENST00000560588 ARHGAP45Q92619 1136 aa13.13□□□□□ -0.31
RMDN3-209ENST00000560588 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.13□□□□□ -0.31
RMDN3-209ENST00000560588 NOB1Q9ULX3 412 aaKnown RBP13.13□□□□□ -0.31
RMDN3-209ENST00000560588 PDZRN3Q9UPQ7 1066 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms