RNA–Protein interactions for RNA: ENST00000559971.5

APH1B-207, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 1 (best)

Gene APH1B, Length 1,455 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-207ENST00000559971 NEUROD2Q15784 382 aa20.94■□□□□ 0.94
APH1B-207ENST00000559971 GGNBP2Q9H3C7 697 aa20.94■□□□□ 0.94
APH1B-207ENST00000559971 FCHSD2O94868 740 aa20.93■□□□□ 0.94
APH1B-207ENST00000559971 PLEKHF1Q96S99 279 aa20.93■□□□□ 0.94
APH1B-207ENST00000559971 CDC42BPGQ6DT37 1551 aa20.92■□□□□ 0.94
APH1B-207ENST00000559971 TMPOP42166 694 aaKnown RBP20.92■□□□□ 0.94
APH1B-207ENST00000559971 CALD1Q05682 793 aaKnown RBP20.91■□□□□ 0.94
APH1B-207ENST00000559971 ZNF428Q96B54 188 aa20.91■□□□□ 0.94
APH1B-207ENST00000559971 CABP1Q9NZU7 370 aa20.91■□□□□ 0.94
APH1B-207ENST00000559971 RRP7AQ9Y3A4 280 aaKnown RBP20.91■□□□□ 0.94
APH1B-207ENST00000559971 KIF20BQ96Q89 1820 aa20.91■□□□□ 0.94
APH1B-207ENST00000559971 TECPR2O15040 1411 aa20.91■□□□□ 0.94
APH1B-207ENST00000559971 EDC4Q6P2E9 1401 aaKnown RBP20.91■□□□□ 0.94
APH1B-207ENST00000559971 U2SURPO15042 1029 aaKnown RBP20.9■□□□□ 0.94
APH1B-207ENST00000559971 PPM1GO15355 546 aaPredicted RBP20.89■□□□□ 0.94
APH1B-207ENST00000559971 SETD1AO15047 1707 aaKnown RBP20.89■□□□□ 0.93
APH1B-207ENST00000559971 ZKSCAN2Q63HK3 967 aa20.88■□□□□ 0.93
APH1B-207ENST00000559971 NPM2Q86SE8 214 aaKnown RBP20.88■□□□□ 0.93
APH1B-207ENST00000559971 WASLO00401 505 aaPredicted RBP20.88■□□□□ 0.93
APH1B-207ENST00000559971 PAK3O75914 559 aaPredicted RBP20.88■□□□□ 0.93
APH1B-207ENST00000559971 RWDD1Q9H446 243 aaPredicted RBP20.88■□□□□ 0.93
APH1B-207ENST00000559971 USP35Q9P2H5 1018 aa20.88■□□□□ 0.93
APH1B-207ENST00000559971 KNDC1Q76NI1 1749 aa20.87■□□□□ 0.93
APH1B-207ENST00000559971 AATKQ6ZMQ8 1374 aa20.87■□□□□ 0.93
APH1B-207ENST00000559971 CPSF1Q10570 1443 aaKnown RBP20.87■□□□□ 0.93
APH1B-207ENST00000559971 RTL5Q5HYW3 569 aaPredicted RBP20.87■□□□□ 0.93
APH1B-207ENST00000559971 FRAT1Q92837 279 aaPredicted RBP20.87■□□□□ 0.93
APH1B-207ENST00000559971 ZNF692Q9BU19 519 aaPredicted RBP20.87■□□□□ 0.93
APH1B-207ENST00000559971 COG6Q9Y2V7 657 aa20.86■□□□□ 0.93
APH1B-207ENST00000559971 TNRQ92752 1358 aa20.86■□□□□ 0.93
APH1B-207ENST00000559971 IPO8O15397 1037 aaKnown RBP20.85■□□□□ 0.93
APH1B-207ENST00000559971 PANK1Q8TE04 598 aa20.84■□□□□ 0.93
APH1B-207ENST00000559971 CHMP4BQ9H444 224 aaKnown RBP20.84■□□□□ 0.93
APH1B-207ENST00000559971 DAXXQ9UER7 740 aaPredicted RBP20.84■□□□□ 0.93
APH1B-207ENST00000559971 CPS1P31327 1500 aa20.83■□□□□ 0.92
APH1B-207ENST00000559971 KIF16BQ96L93 1317 aa20.83■□□□□ 0.92
APH1B-207ENST00000559971 RIPK4P57078 832 aa20.82■□□□□ 0.92
APH1B-207ENST00000559971 MVPQ14764 893 aaKnown RBP20.82■□□□□ 0.92
APH1B-207ENST00000559971 ALDH1L2Q3SY69 923 aa20.82■□□□□ 0.92
APH1B-207ENST00000559971 C8orf34Q49A92 452 aa20.82■□□□□ 0.92
APH1B-207ENST00000559971 DZIP1LQ8IYY4 767 aaKnown RBP20.82■□□□□ 0.92
APH1B-207ENST00000559971 TRIM35Q9UPQ4 493 aa20.82■□□□□ 0.92
APH1B-207ENST00000559971 CCDC61Q9Y6R9 512 aa20.82■□□□□ 0.92
APH1B-207ENST00000559971 LMOD3Q0VAK6 560 aa20.81■□□□□ 0.92
APH1B-207ENST00000559971 FTSJ3Q8IY81 847 aaKnown RBP20.81■□□□□ 0.92
APH1B-207ENST00000559971 PPIP5K1Q6PFW1 1433 aa20.8■□□□□ 0.92
APH1B-207ENST00000559971 NRXN3Q9Y4C0 1643 aa20.8■□□□□ 0.92
APH1B-207ENST00000559971 IGHDP01880 384 aa20.8■□□□□ 0.92
APH1B-207ENST00000559971 BRPF1P55201 1214 aaPredicted RBP20.8■□□□□ 0.92
APH1B-207ENST00000559971 MLECQ14165 292 aa20.8■□□□□ 0.92
APH1B-207ENST00000559971 WAPLQ7Z5K2 1190 aa20.8■□□□□ 0.92
APH1B-207ENST00000559971 POLKQ9UBT6 870 aa20.8■□□□□ 0.92
APH1B-207ENST00000559971 DDX19BQ9UMR2 479 aa20.8■□□□□ 0.92
APH1B-207ENST00000559971 CDK12Q9NYV4 1490 aaPredicted RBP20.79■□□□□ 0.92
APH1B-207ENST00000559971 TMEM2Q9UHN6 1383 aa20.79■□□□□ 0.92
APH1B-207ENST00000559971 SMC4Q9NTJ3 1288 aa20.79■□□□□ 0.92
APH1B-207ENST00000559971 RGS3P49796 1198 aa20.78■□□□□ 0.92
APH1B-207ENST00000559971 NUDT16Q96DE0 195 aaKnown RBP20.77■□□□□ 0.92
APH1B-207ENST00000559971 COG3Q96JB2 828 aa20.77■□□□□ 0.92
APH1B-207ENST00000559971 EXOSC9Q06265 439 aaKnown RBP20.76■□□□□ 0.91
APH1B-207ENST00000559971 NFE2L2Q16236 605 aa20.76■□□□□ 0.91
APH1B-207ENST00000559971 RSPH6AQ9H0K4 717 aa20.76■□□□□ 0.91
APH1B-207ENST00000559971 METP08581 1390 aa20.76■□□□□ 0.91
APH1B-207ENST00000559971 ATF7IPQ6VMQ6 1270 aa20.75■□□□□ 0.91
APH1B-207ENST00000559971 PLEKHG1Q9ULL1 1385 aa20.75■□□□□ 0.91
APH1B-207ENST00000559971 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.75■□□□□ 0.91
APH1B-207ENST00000559971 HDAC1Q13547 482 aaPredicted RBP20.74■□□□□ 0.91
APH1B-207ENST00000559971 HAP1P54257 671 aaPredicted RBP20.73■□□□□ 0.91
APH1B-207ENST00000559971 GNAI1P63096 354 aa20.73■□□□□ 0.91
APH1B-207ENST00000559971 UPF2Q9HAU5 1272 aaKnown RBP20.73■□□□□ 0.91
APH1B-207ENST00000559971 RLBP1P12271 317 aa20.72■□□□□ 0.91
APH1B-207ENST00000559971 PRKAR2BP31323 418 aa20.72■□□□□ 0.91
APH1B-207ENST00000559971 ARHGAP45Q92619 1136 aa20.72■□□□□ 0.91
APH1B-207ENST00000559971 IFT57Q9NWB7 429 aa20.72■□□□□ 0.91
APH1B-207ENST00000559971 MON2Q7Z3U7 1717 aa20.71■□□□□ 0.91
APH1B-207ENST00000559971 LRRC7Q96NW7 1537 aa20.71■□□□□ 0.91
APH1B-207ENST00000559971 IL13P35225 146 aa20.71■□□□□ 0.91
APH1B-207ENST00000559971 TXNDC2Q86VQ3 553 aa20.71■□□□□ 0.91
APH1B-207ENST00000559971 SSH1Q8WYL5 1049 aa20.71■□□□□ 0.91
APH1B-207ENST00000559971 PCDHB15Q9Y5E8 787 aa20.71■□□□□ 0.91
APH1B-207ENST00000559971 TSR2Q969E8 191 aaKnown RBP20.7■□□□□ 0.9
APH1B-207ENST00000559971 UBR1Q8IWV7 1749 aa20.69■□□□□ 0.9
APH1B-207ENST00000559971 EID1Q9Y6B2 187 aa20.69■□□□□ 0.9
APH1B-207ENST00000559971 VIRMAQ69YN4 1812 aaKnown RBP20.69■□□□□ 0.9
APH1B-207ENST00000559971 PLEKHG3A1L390 1219 aa20.69■□□□□ 0.9
APH1B-207ENST00000559971 NBR1Q14596 966 aa20.69■□□□□ 0.9
APH1B-207ENST00000559971 BCL2L13Q9BXK5 485 aa20.69■□□□□ 0.9
APH1B-207ENST00000559971 TRIM27P14373 513 aa20.68■□□□□ 0.9
APH1B-207ENST00000559971 BECN1Q14457 450 aa20.68■□□□□ 0.9
APH1B-207ENST00000559971 SKAP1Q86WV1 359 aa20.68■□□□□ 0.9
APH1B-207ENST00000559971 SENP3Q9H4L4 574 aaPredicted RBP20.68■□□□□ 0.9
APH1B-207ENST00000559971 AKAP12Q02952 1782 aa20.68■□□□□ 0.9
APH1B-207ENST00000559971 PDZRN3Q9UPQ7 1066 aa20.67■□□□□ 0.9
APH1B-207ENST00000559971 ITSN1Q15811 1721 aa20.66■□□□□ 0.9
APH1B-207ENST00000559971 NOB1Q9ULX3 412 aaKnown RBP20.66■□□□□ 0.9
APH1B-207ENST00000559971 ADAMTS13Q76LX8 1427 aa20.66■□□□□ 0.9
APH1B-207ENST00000559971 NME9Q86XW9 330 aa20.65■□□□□ 0.9
APH1B-207ENST00000559971 C3P01024 1663 aa20.65■□□□□ 0.9
APH1B-207ENST00000559971 MAP2P11137 1827 aaKnown RBP20.65■□□□□ 0.9
APH1B-207ENST00000559971 ITPRIPQ8IWB1 547 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms