RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 CIZ1Q9ULV3 898 aaPredicted RBP16.67■□□□□ 0.26
RPS6KC1-206ENST00000543354 ERC2O15083 957 aa16.66■□□□□ 0.26
RPS6KC1-206ENST00000543354 DDX54Q8TDD1 881 aaKnown RBP16.66■□□□□ 0.26
RPS6KC1-206ENST00000543354 TBC1D32Q96NH3 1257 aa16.66■□□□□ 0.26
RPS6KC1-206ENST00000543354 ZMYND15Q9H091 742 aa16.66■□□□□ 0.26
RPS6KC1-206ENST00000543354 TRIM27P14373 513 aa16.66■□□□□ 0.26
RPS6KC1-206ENST00000543354 LRPPRCP42704 1394 aaKnown RBP16.66■□□□□ 0.26
RPS6KC1-206ENST00000543354 ROCK1Q13464 1354 aa16.66■□□□□ 0.26
RPS6KC1-206ENST00000543354 RNF123Q5XPI4 1314 aa16.66■□□□□ 0.26
RPS6KC1-206ENST00000543354 G3BP1Q13283 466 aaKnown RBP eCLIP16.66■□□□□ 0.26
RPS6KC1-206ENST00000543354 DNAJC5BQ9UF47 199 aa16.66■□□□□ 0.26
RPS6KC1-206ENST00000543354 MAP3K1Q13233 1512 aa16.66■□□□□ 0.26
RPS6KC1-206ENST00000543354 CPLX1O14810 134 aa16.65■□□□□ 0.26
RPS6KC1-206ENST00000543354 LARP6Q9BRS8 491 aaKnown RBP16.65■□□□□ 0.26
RPS6KC1-206ENST00000543354 STK3Q13188 491 aa16.65■□□□□ 0.26
RPS6KC1-206ENST00000543354 CCDC73Q6ZRK6 1079 aa16.65■□□□□ 0.26
RPS6KC1-206ENST00000543354 FERMT3Q86UX7 667 aa16.65■□□□□ 0.26
RPS6KC1-206ENST00000543354 MIS18AQ9NYP9 233 aa16.65■□□□□ 0.26
RPS6KC1-206ENST00000543354 TPM3P06753 285 aa16.64■□□□□ 0.25
RPS6KC1-206ENST00000543354 STAC3Q96MF2 364 aa16.64■□□□□ 0.25
RPS6KC1-206ENST00000543354 RNF20Q5VTR2 975 aa16.64■□□□□ 0.25
RPS6KC1-206ENST00000543354 RBM42Q9BTD8 480 aaKnown RBP16.64■□□□□ 0.25
RPS6KC1-206ENST00000543354 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.64■□□□□ 0.25
RPS6KC1-206ENST00000543354 HMGN5P82970 282 aaKnown RBP16.63■□□□□ 0.25
RPS6KC1-206ENST00000543354 RRS1Q15050 365 aaKnown RBP16.63■□□□□ 0.25
RPS6KC1-206ENST00000543354 MTERF4Q7Z6M4 381 aaKnown RBP16.63■□□□□ 0.25
RPS6KC1-206ENST00000543354 CLASRPQ8N2M8 674 aaKnown RBP16.63■□□□□ 0.25
RPS6KC1-206ENST00000543354 EHBP1L1Q8N3D4 1523 aa16.63■□□□□ 0.25
RPS6KC1-206ENST00000543354 APPP05067 770 aa16.63■□□□□ 0.25
RPS6KC1-206ENST00000543354 CWC22Q9HCG8 908 aaKnown RBP16.62■□□□□ 0.25
RPS6KC1-206ENST00000543354 RBM27Q9P2N5 1060 aaKnown RBP16.62■□□□□ 0.25
RPS6KC1-206ENST00000543354 NEUROD6Q96NK8 337 aa16.62■□□□□ 0.25
RPS6KC1-206ENST00000543354 RPRD2Q5VT52 1461 aaKnown RBP16.62■□□□□ 0.25
RPS6KC1-206ENST00000543354 NKTRP30414 1462 aaKnown RBP16.62■□□□□ 0.25
RPS6KC1-206ENST00000543354 NEXNQ0ZGT2 675 aa16.61■□□□□ 0.25
RPS6KC1-206ENST00000543354 MNS1Q8NEH6 495 aa16.61■□□□□ 0.25
RPS6KC1-206ENST00000543354 DISP3Q9P2K9 1392 aa16.61■□□□□ 0.25
RPS6KC1-206ENST00000543354 ABCC5O15440 1437 aa16.61■□□□□ 0.25
RPS6KC1-206ENST00000543354 CCDC34Q96HJ3 373 aa16.61■□□□□ 0.25
RPS6KC1-206ENST00000543354 CBX1P83916 185 aa16.61■□□□□ 0.25
RPS6KC1-206ENST00000543354 NOC3LQ8WTT2 800 aaKnown RBP16.61■□□□□ 0.25
RPS6KC1-206ENST00000543354 C1orf141Q5JVX7 400 aa16.6■□□□□ 0.25
RPS6KC1-206ENST00000543354 FSD1Q9BTV5 496 aa16.6■□□□□ 0.25
RPS6KC1-206ENST00000543354 DHX29Q7Z478 1369 aaKnown RBP16.6■□□□□ 0.25
RPS6KC1-206ENST00000543354 GNAI3P08754 354 aa16.6■□□□□ 0.25
RPS6KC1-206ENST00000543354 FBLN1P23142 703 aa16.6■□□□□ 0.25
RPS6KC1-206ENST00000543354 FILIP1Q7Z7B0 1213 aa16.6■□□□□ 0.25
RPS6KC1-206ENST00000543354 NSD3Q9BZ95 1437 aa16.6■□□□□ 0.25
RPS6KC1-206ENST00000543354 GNAI2P04899 355 aa16.6■□□□□ 0.25
RPS6KC1-206ENST00000543354 TROQ12816 1431 aaPredicted RBP16.6■□□□□ 0.25
RPS6KC1-206ENST00000543354 POLA1P09884 1462 aaPredicted RBP16.6■□□□□ 0.25
RPS6KC1-206ENST00000543354 RLBP1P12271 317 aa16.6■□□□□ 0.25
RPS6KC1-206ENST00000543354 SPINK5Q9NQ38 1064 aaPredicted RBP16.6■□□□□ 0.25
RPS6KC1-206ENST00000543354 MCM2P49736 904 aa16.59■□□□□ 0.25
RPS6KC1-206ENST00000543354 STK11IPQ8N1F8 1099 aa16.59■□□□□ 0.25
RPS6KC1-206ENST00000543354 RRAGDQ9NQL2 400 aaPredicted RBP16.59■□□□□ 0.25
RPS6KC1-206ENST00000543354 USP25Q9UHP3 1055 aa16.59■□□□□ 0.25
RPS6KC1-206ENST00000543354 ATP2B1P20020 1258 aa16.59■□□□□ 0.25
RPS6KC1-206ENST00000543354 CNTROBQ8N137 903 aa16.59■□□□□ 0.25
RPS6KC1-206ENST00000543354 CLSTN1O94985 981 aa16.58■□□□□ 0.25
RPS6KC1-206ENST00000543354 SKIDA1Q1XH10 827 aa16.58■□□□□ 0.25
RPS6KC1-206ENST00000543354 TSHZ3Q63HK5 1081 aa16.58■□□□□ 0.25
RPS6KC1-206ENST00000543354 EPRSP07814 1512 aaKnown RBP16.58■□□□□ 0.25
RPS6KC1-206ENST00000543354 TTLL5Q6EMB2 1281 aa16.58■□□□□ 0.24
RPS6KC1-206ENST00000543354 CWC27Q6UX04 472 aaKnown RBP16.58■□□□□ 0.24
RPS6KC1-206ENST00000543354 TBC1D9Q6ZT07 1266 aa16.58■□□□□ 0.24
RPS6KC1-206ENST00000543354 ZHX1Q9UKY1 873 aaPredicted RBP16.58■□□□□ 0.24
RPS6KC1-206ENST00000543354 EID1Q9Y6B2 187 aa16.58■□□□□ 0.24
RPS6KC1-206ENST00000543354 EFCAB5A4FU69 1503 aa16.58■□□□□ 0.24
RPS6KC1-206ENST00000543354 WDR33Q9C0J8 1336 aaKnown RBP16.58■□□□□ 0.24
RPS6KC1-206ENST00000543354 LRRCC1Q9C099 1032 aa16.58■□□□□ 0.24
RPS6KC1-206ENST00000543354 BAG4O95429 457 aaKnown RBP16.57■□□□□ 0.24
RPS6KC1-206ENST00000543354 NLRP6P59044 892 aa16.57■□□□□ 0.24
RPS6KC1-206ENST00000543354 CAMK4Q16566 473 aa16.57■□□□□ 0.24
RPS6KC1-206ENST00000543354 NINLQ9Y2I6 1382 aa16.57■□□□□ 0.24
RPS6KC1-206ENST00000543354 FAM177A1Q8N128 213 aaPredicted RBP16.57■□□□□ 0.24
RPS6KC1-206ENST00000543354 PDILTQ8N807 584 aa16.57■□□□□ 0.24
RPS6KC1-206ENST00000543354 LARP1BQ659C4 914 aaKnown RBP16.57■□□□□ 0.24
RPS6KC1-206ENST00000543354 SIL1Q9H173 461 aa16.57■□□□□ 0.24
RPS6KC1-206ENST00000543354 F6X3S4 739 aa16.56■□□□□ 0.24
RPS6KC1-206ENST00000543354 SMC2O95347 1197 aa16.56■□□□□ 0.24
RPS6KC1-206ENST00000543354 TXNDC2Q86VQ3 553 aa16.56■□□□□ 0.24
RPS6KC1-206ENST00000543354 CCDC192P0DO97 292 aa16.56■□□□□ 0.24
RPS6KC1-206ENST00000543354 SYNE3Q6ZMZ3 975 aa16.56■□□□□ 0.24
RPS6KC1-206ENST00000543354 CDK19Q9BWU1 502 aa16.56■□□□□ 0.24
RPS6KC1-206ENST00000543354 CT47B1P0C2W7 299 aaPredicted RBP16.55■□□□□ 0.24
RPS6KC1-206ENST00000543354 CLCN1P35523 988 aa16.55■□□□□ 0.24
RPS6KC1-206ENST00000543354 CPLX2Q6PUV4 134 aaKnown RBP16.55■□□□□ 0.24
RPS6KC1-206ENST00000543354 NUTM1Q86Y26 1132 aa16.55■□□□□ 0.24
RPS6KC1-206ENST00000543354 ARHGAP5Q13017 1502 aa16.55■□□□□ 0.24
RPS6KC1-206ENST00000543354 KINO60870 393 aaKnown RBP16.55■□□□□ 0.24
RPS6KC1-206ENST00000543354 MCM10Q7L590 875 aa16.55■□□□□ 0.24
RPS6KC1-206ENST00000543354 ZNF830Q96NB3 372 aaPredicted RBP16.55■□□□□ 0.24
RPS6KC1-206ENST00000543354 TNMDQ9H2S6 317 aa16.55■□□□□ 0.24
RPS6KC1-206ENST00000543354 HDGFL1Q5TGJ6 251 aa16.55■□□□□ 0.24
RPS6KC1-206ENST00000543354 DNAJC2Q99543 621 aaKnown RBP16.55■□□□□ 0.24
RPS6KC1-206ENST00000543354 HSP90AB4PQ58FF6 505 aa16.54■□□□□ 0.24
RPS6KC1-206ENST00000543354 CCDC112Q8NEF3 446 aa16.54■□□□□ 0.24
RPS6KC1-206ENST00000543354 RIC3Q7Z5B4 369 aa16.54■□□□□ 0.24
RPS6KC1-206ENST00000543354 SUPT6HQ7KZ85 1726 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms