RNA–Protein interactions for RNA: ENST00000541897.5

MSRB3-211, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 489 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-211ENST00000541897 CD163L1Q9NR16 1453 aa29.08■■■□□ 2.25
MSRB3-211ENST00000541897 FOXO3O43524 673 aa29.07■■■□□ 2.24
MSRB3-211ENST00000541897 RXRBP28702 533 aa29.07■■■□□ 2.24
MSRB3-211ENST00000541897 ANKRD36BQ8N2N9 1353 aa29.06■■■□□ 2.24
MSRB3-211ENST00000541897 ZNF316A6NFI3 1004 aaPredicted RBP29.06■■■□□ 2.24
MSRB3-211ENST00000541897 C8orf37Q96NL8 207 aa29.06■■■□□ 2.24
MSRB3-211ENST00000541897 HDGFL2Q7Z4V5 671 aaPredicted RBP29.05■■■□□ 2.24
MSRB3-211ENST00000541897 POLR3GLQ9BT43 218 aa29.05■■■□□ 2.24
MSRB3-211ENST00000541897 SOS2Q07890 1332 aaPredicted RBP29.04■■■□□ 2.24
MSRB3-211ENST00000541897 PXDNQ92626 1479 aa29.04■■■□□ 2.24
MSRB3-211ENST00000541897 AKAP12Q02952 1782 aa29.03■■■□□ 2.24
MSRB3-211ENST00000541897 USP6P35125 1406 aa29.03■■■□□ 2.24
MSRB3-211ENST00000541897 A0A1W2PP64 1363 aa29.02■■■□□ 2.24
MSRB3-211ENST00000541897 PSME1Q06323 249 aa29.02■■■□□ 2.24
MSRB3-211ENST00000541897 ADAMTS2O95450 1211 aa29.01■■■□□ 2.23
MSRB3-211ENST00000541897 KRT28Q7Z3Y7 464 aa29■■■□□ 2.23
MSRB3-211ENST00000541897 MON2Q7Z3U7 1717 aa29■■■□□ 2.23
MSRB3-211ENST00000541897 SBNO1A3KN83 1393 aa29■■■□□ 2.23
MSRB3-211ENST00000541897 KTN1Q86UP2 1357 aaKnown RBP29■■■□□ 2.23
MSRB3-211ENST00000541897 SSH2Q76I76 1423 aa28.99■■■□□ 2.23
MSRB3-211ENST00000541897 UPF1Q92900 1129 aaKnown RBP eCLIP28.98■■■□□ 2.23
MSRB3-211ENST00000541897 EDC4Q6P2E9 1401 aaKnown RBP28.97■■■□□ 2.23
MSRB3-211ENST00000541897 QTRT2Q9H974 415 aaKnown RBP28.97■■■□□ 2.23
MSRB3-211ENST00000541897 TRPM3Q9HCF6 1732 aaPredicted RBP28.97■■■□□ 2.23
MSRB3-211ENST00000541897 NGLY1Q96IV0 654 aa28.96■■■□□ 2.23
MSRB3-211ENST00000541897 NRKQ7Z2Y5 1582 aa28.95■■■□□ 2.22
MSRB3-211ENST00000541897 CDK12Q9NYV4 1490 aaPredicted RBP28.94■■■□□ 2.22
MSRB3-211ENST00000541897 TTC21AQ8NDW8 1320 aa28.94■■■□□ 2.22
MSRB3-211ENST00000541897 PANK3Q9H999 370 aa28.93■■■□□ 2.22
MSRB3-211ENST00000541897 XPCQ01831 940 aaPredicted RBP28.92■■■□□ 2.22
MSRB3-211ENST00000541897 SPATA31A3Q5VYP0 1347 aa28.92■■■□□ 2.22
MSRB3-211ENST00000541897 RBM6P78332 1123 aaKnown RBP28.91■■■□□ 2.22
MSRB3-211ENST00000541897 TNS3Q68CZ2 1445 aa28.91■■■□□ 2.22
MSRB3-211ENST00000541897 TTC21BQ7Z4L5 1316 aa28.91■■■□□ 2.22
MSRB3-211ENST00000541897 COL22A1Q8NFW1 1626 aaPredicted RBP28.91■■■□□ 2.22
MSRB3-211ENST00000541897 CARD14Q9BXL6 1004 aa28.9■■■□□ 2.22
MSRB3-211ENST00000541897 ARHGEF10O15013 1369 aa28.88■■■□□ 2.21
MSRB3-211ENST00000541897 RGS12O14924 1447 aa28.88■■■□□ 2.21
MSRB3-211ENST00000541897 ALS2Q96Q42 1657 aa28.88■■■□□ 2.21
MSRB3-211ENST00000541897 NSD3Q9BZ95 1437 aa28.87■■■□□ 2.21
MSRB3-211ENST00000541897 USP21Q9UK80 565 aa28.86■■■□□ 2.21
MSRB3-211ENST00000541897 PER1O15534 1290 aaPredicted RBP28.85■■■□□ 2.21
MSRB3-211ENST00000541897 PAK3O75914 559 aaPredicted RBP28.85■■■□□ 2.21
MSRB3-211ENST00000541897 MARF1Q9Y4F3 1742 aaKnown RBP28.83■■■□□ 2.21
MSRB3-211ENST00000541897 CGNL1Q0VF96 1302 aa28.82■■■□□ 2.2
MSRB3-211ENST00000541897 USP31Q70CQ4 1352 aa28.82■■■□□ 2.2
MSRB3-211ENST00000541897 FNBP4Q8N3X1 1017 aaPredicted RBP28.81■■■□□ 2.2
MSRB3-211ENST00000541897 ABTB2Q8N961 1025 aa28.81■■■□□ 2.2
MSRB3-211ENST00000541897 KNSTRNQ9Y448 316 aa28.81■■■□□ 2.2
MSRB3-211ENST00000541897 PIK3C2AO00443 1686 aa28.8■■■□□ 2.2
MSRB3-211ENST00000541897 DDX10Q13206 875 aaKnown RBP28.8■■■□□ 2.2
MSRB3-211ENST00000541897 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.8■■■□□ 2.2
MSRB3-211ENST00000541897 USP54Q70EL1 1684 aa28.8■■■□□ 2.2
MSRB3-211ENST00000541897 NSD2O96028 1365 aa28.78■■■□□ 2.2
MSRB3-211ENST00000541897 NPC1L1Q9UHC9 1359 aa28.78■■■□□ 2.2
MSRB3-211ENST00000541897 FYB1O15117 783 aa28.78■■■□□ 2.2
MSRB3-211ENST00000541897 NLRP13Q86W25 1043 aa28.78■■■□□ 2.2
MSRB3-211ENST00000541897 TRPC5Q9UL62 973 aaPredicted RBP28.78■■■□□ 2.2
MSRB3-211ENST00000541897 NME9Q86XW9 330 aa28.76■■■□□ 2.19
MSRB3-211ENST00000541897 USP19O94966 1318 aa28.75■■■□□ 2.19
MSRB3-211ENST00000541897 AMER1Q5JTC6 1135 aaPredicted RBP28.75■■■□□ 2.19
MSRB3-211ENST00000541897 LMOD2Q6P5Q4 547 aa28.75■■■□□ 2.19
MSRB3-211ENST00000541897 KIF20BQ96Q89 1820 aa28.75■■■□□ 2.19
MSRB3-211ENST00000541897 OVOS2A0A0J9YW53 1432 aa28.75■■■□□ 2.19
MSRB3-211ENST00000541897 OVOS2Q6IE36 1432 aa28.75■■■□□ 2.19
MSRB3-211ENST00000541897 NLRP6P59044 892 aa28.74■■■□□ 2.19
MSRB3-211ENST00000541897 ATRNO75882 1429 aa28.73■■■□□ 2.19
MSRB3-211ENST00000541897 BCL9LQ86UU0 1499 aa28.72■■■□□ 2.19
MSRB3-211ENST00000541897 CRYBG1Q9Y4K1 1723 aa28.71■■■□□ 2.19
MSRB3-211ENST00000541897 SLIT3O75094 1523 aa28.7■■■□□ 2.19
MSRB3-211ENST00000541897 COG3Q96JB2 828 aa28.7■■■□□ 2.18
MSRB3-211ENST00000541897 GGNBP2Q9H3C7 697 aa28.69■■■□□ 2.18
MSRB3-211ENST00000541897 NUTM2GQ5VZR2 741 aa28.68■■■□□ 2.18
MSRB3-211ENST00000541897 ANKRD26Q9UPS8 1709 aa28.68■■■□□ 2.18
MSRB3-211ENST00000541897 ZRANB1Q9UGI0 708 aa28.67■■■□□ 2.18
MSRB3-211ENST00000541897 PHRF1Q9P1Y6 1649 aaKnown RBP28.66■■■□□ 2.18
MSRB3-211ENST00000541897 KCNH5Q8NCM2 988 aa28.66■■■□□ 2.18
MSRB3-211ENST00000541897 ABCA3Q99758 1704 aa28.66■■■□□ 2.18
MSRB3-211ENST00000541897 PLEKHG5O94827 1062 aa28.65■■■□□ 2.18
MSRB3-211ENST00000541897 GCP02774 474 aa28.63■■■□□ 2.17
MSRB3-211ENST00000541897 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.63■■■□□ 2.17
MSRB3-211ENST00000541897 CABLES1Q8TDN4 633 aa28.62■■■□□ 2.17
MSRB3-211ENST00000541897 GJD4Q96KN9 370 aaPredicted RBP28.62■■■□□ 2.17
MSRB3-211ENST00000541897 NFAT5O94916 1531 aa28.6■■■□□ 2.17
MSRB3-211ENST00000541897 SLIT2O94813 1529 aa28.59■■■□□ 2.17
MSRB3-211ENST00000541897 UNC5CLQ8IV45 518 aa28.59■■■□□ 2.17
MSRB3-211ENST00000541897 CPDO75976 1380 aa28.59■■■□□ 2.17
MSRB3-211ENST00000541897 AATKQ6ZMQ8 1374 aa28.59■■■□□ 2.17
MSRB3-211ENST00000541897 HAP1P54257 671 aaPredicted RBP28.58■■■□□ 2.17
MSRB3-211ENST00000541897 CC2D1BQ5T0F9 858 aaKnown RBP28.58■■■□□ 2.17
MSRB3-211ENST00000541897 MORC1Q86VD1 984 aa28.58■■■□□ 2.17
MSRB3-211ENST00000541897 EP400Q96L91 3159 aa28.58■■■□□ 2.17
MSRB3-211ENST00000541897 GLI3P10071 1580 aa28.56■■■□□ 2.16
MSRB3-211ENST00000541897 PARD3Q8TEW0 1356 aa28.53■■■□□ 2.16
MSRB3-211ENST00000541897 ARHGEF25Q86VW2 580 aa28.53■■■□□ 2.16
MSRB3-211ENST00000541897 PLCH1Q4KWH8 1693 aa28.53■■■□□ 2.16
MSRB3-211ENST00000541897 BRWD3Q6RI45 1802 aa28.53■■■□□ 2.16
MSRB3-211ENST00000541897 ABCC6O95255 1503 aa28.52■■■□□ 2.16
MSRB3-211ENST00000541897 KIF24Q5T7B8 1368 aa28.51■■■□□ 2.16
MSRB3-211ENST00000541897 RALBP1Q15311 655 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms