RNA–Protein interactions for RNA: ENST00000424415.1

FAM239B-202, Transcript of family with sequence similarity 239 member B, humanhuman

TSL 2 BASIC

Gene FAM239B, Length 2,194 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239B-202ENST00000424415 DMRT2Q9Y5R5 561 aa13.45□□□□□ -0.26
FAM239B-202ENST00000424415 ESF1Q9H501 851 aaKnown RBP13.44□□□□□ -0.26
FAM239B-202ENST00000424415 CDC42BPGQ6DT37 1551 aa13.44□□□□□ -0.26
FAM239B-202ENST00000424415 NEFMP07197 916 aa13.44□□□□□ -0.26
FAM239B-202ENST00000424415 NEUROD2Q15784 382 aa13.44□□□□□ -0.26
FAM239B-202ENST00000424415 FAM135BQ49AJ0 1406 aa13.43□□□□□ -0.26
FAM239B-202ENST00000424415 DIAPH1O60610 1272 aaKnown RBP13.43□□□□□ -0.26
FAM239B-202ENST00000424415 PAK3O75914 559 aaPredicted RBP13.42□□□□□ -0.26
FAM239B-202ENST00000424415 RTL5Q5HYW3 569 aaPredicted RBP13.42□□□□□ -0.26
FAM239B-202ENST00000424415 NPM2Q86SE8 214 aaKnown RBP13.42□□□□□ -0.26
FAM239B-202ENST00000424415 PLEKHF1Q96S99 279 aa13.42□□□□□ -0.26
FAM239B-202ENST00000424415 GGNBP2Q9H3C7 697 aa13.42□□□□□ -0.26
FAM239B-202ENST00000424415 USP35Q9P2H5 1018 aa13.42□□□□□ -0.26
FAM239B-202ENST00000424415 KIF20BQ96Q89 1820 aa13.42□□□□□ -0.26
FAM239B-202ENST00000424415 PPM1GO15355 546 aaPredicted RBP13.42□□□□□ -0.26
FAM239B-202ENST00000424415 FCHSD2O94868 740 aa13.42□□□□□ -0.26
FAM239B-202ENST00000424415 ZNF428Q96B54 188 aa13.42□□□□□ -0.26
FAM239B-202ENST00000424415 RRP7AQ9Y3A4 280 aaKnown RBP13.42□□□□□ -0.26
FAM239B-202ENST00000424415 TMPOP42166 694 aaKnown RBP13.41□□□□□ -0.26
FAM239B-202ENST00000424415 CALD1Q05682 793 aaKnown RBP13.41□□□□□ -0.26
FAM239B-202ENST00000424415 TECPR2O15040 1411 aa13.41□□□□□ -0.26
FAM239B-202ENST00000424415 U2SURPO15042 1029 aaKnown RBP13.41□□□□□ -0.26
FAM239B-202ENST00000424415 FOXD4L1Q9NU39 408 aa13.41□□□□□ -0.26
FAM239B-202ENST00000424415 EDC4Q6P2E9 1401 aaKnown RBP13.41□□□□□ -0.26
FAM239B-202ENST00000424415 SETD1AO15047 1707 aaKnown RBP13.41□□□□□ -0.26
FAM239B-202ENST00000424415 FRAT1Q92837 279 aaPredicted RBP13.4□□□□□ -0.26
FAM239B-202ENST00000424415 CABP1Q9NZU7 370 aa13.4□□□□□ -0.26
FAM239B-202ENST00000424415 KNDC1Q76NI1 1749 aa13.4□□□□□ -0.26
FAM239B-202ENST00000424415 ZKSCAN2Q63HK3 967 aa13.39□□□□□ -0.27
FAM239B-202ENST00000424415 RWDD1Q9H446 243 aaPredicted RBP13.39□□□□□ -0.27
FAM239B-202ENST00000424415 DAXXQ9UER7 740 aaPredicted RBP13.39□□□□□ -0.27
FAM239B-202ENST00000424415 TSPOAP1O95153 1857 aa13.39□□□□□ -0.27
FAM239B-202ENST00000424415 COG6Q9Y2V7 657 aa13.39□□□□□ -0.27
FAM239B-202ENST00000424415 C8orf34Q49A92 452 aa13.38□□□□□ -0.27
FAM239B-202ENST00000424415 AATKQ6ZMQ8 1374 aa13.38□□□□□ -0.27
FAM239B-202ENST00000424415 CPSF1Q10570 1443 aaKnown RBP13.38□□□□□ -0.27
FAM239B-202ENST00000424415 WASLO00401 505 aaPredicted RBP13.38□□□□□ -0.27
FAM239B-202ENST00000424415 PANK1Q8TE04 598 aa13.38□□□□□ -0.27
FAM239B-202ENST00000424415 IPO8O15397 1037 aaKnown RBP13.37□□□□□ -0.27
FAM239B-202ENST00000424415 FTSJ3Q8IY81 847 aaKnown RBP13.37□□□□□ -0.27
FAM239B-202ENST00000424415 KIF16BQ96L93 1317 aa13.37□□□□□ -0.27
FAM239B-202ENST00000424415 MVPQ14764 893 aaKnown RBP13.37□□□□□ -0.27
FAM239B-202ENST00000424415 ZNF692Q9BU19 519 aaPredicted RBP13.37□□□□□ -0.27
FAM239B-202ENST00000424415 CHMP4BQ9H444 224 aaKnown RBP13.37□□□□□ -0.27
FAM239B-202ENST00000424415 CPS1P31327 1500 aa13.36□□□□□ -0.27
FAM239B-202ENST00000424415 DZIP1LQ8IYY4 767 aaKnown RBP13.36□□□□□ -0.27
FAM239B-202ENST00000424415 CDK12Q9NYV4 1490 aaPredicted RBP13.36□□□□□ -0.27
FAM239B-202ENST00000424415 TNRQ92752 1358 aa13.36□□□□□ -0.27
FAM239B-202ENST00000424415 RIPK4P57078 832 aa13.35□□□□□ -0.27
FAM239B-202ENST00000424415 ALDH1L2Q3SY69 923 aa13.35□□□□□ -0.27
FAM239B-202ENST00000424415 PPIP5K1Q6PFW1 1433 aa13.35□□□□□ -0.27
FAM239B-202ENST00000424415 DDX19BQ9UMR2 479 aa13.35□□□□□ -0.27
FAM239B-202ENST00000424415 TRIM35Q9UPQ4 493 aa13.35□□□□□ -0.27
FAM239B-202ENST00000424415 NRXN3Q9Y4C0 1643 aa13.35□□□□□ -0.27
FAM239B-202ENST00000424415 IGHDP01880 384 aa13.35□□□□□ -0.27
FAM239B-202ENST00000424415 RGS3P49796 1198 aa13.35□□□□□ -0.27
FAM239B-202ENST00000424415 LMOD3Q0VAK6 560 aa13.34□□□□□ -0.27
FAM239B-202ENST00000424415 SMC4Q9NTJ3 1288 aa13.34□□□□□ -0.27
FAM239B-202ENST00000424415 CCDC61Q9Y6R9 512 aa13.34□□□□□ -0.27
FAM239B-202ENST00000424415 BRPF1P55201 1214 aaPredicted RBP13.34□□□□□ -0.27
FAM239B-202ENST00000424415 POLKQ9UBT6 870 aa13.33□□□□□ -0.28
FAM239B-202ENST00000424415 TMEM2Q9UHN6 1383 aa13.33□□□□□ -0.28
FAM239B-202ENST00000424415 ATF7IPQ6VMQ6 1270 aa13.32□□□□□ -0.28
FAM239B-202ENST00000424415 WAPLQ7Z5K2 1190 aa13.32□□□□□ -0.28
FAM239B-202ENST00000424415 UPF2Q9HAU5 1272 aaKnown RBP13.32□□□□□ -0.28
FAM239B-202ENST00000424415 PRKCSHP14314 528 aaPredicted RBP13.32□□□□□ -0.28
FAM239B-202ENST00000424415 EXOSC9Q06265 439 aaKnown RBP13.32□□□□□ -0.28
FAM239B-202ENST00000424415 NBR1Q14596 966 aa13.32□□□□□ -0.28
FAM239B-202ENST00000424415 COG3Q96JB2 828 aa13.32□□□□□ -0.28
FAM239B-202ENST00000424415 RSPH6AQ9H0K4 717 aa13.32□□□□□ -0.28
FAM239B-202ENST00000424415 VIRMAQ69YN4 1812 aaKnown RBP13.32□□□□□ -0.28
FAM239B-202ENST00000424415 LRRC7Q96NW7 1537 aa13.32□□□□□ -0.28
FAM239B-202ENST00000424415 HDAC1Q13547 482 aaPredicted RBP13.31□□□□□ -0.28
FAM239B-202ENST00000424415 METP08581 1390 aa13.31□□□□□ -0.28
FAM239B-202ENST00000424415 RLBP1P12271 317 aa13.31□□□□□ -0.28
FAM239B-202ENST00000424415 MLECQ14165 292 aa13.31□□□□□ -0.28
FAM239B-202ENST00000424415 NFE2L2Q16236 605 aa13.31□□□□□ -0.28
FAM239B-202ENST00000424415 PIAS4Q8N2W9 510 aaPredicted RBP13.31□□□□□ -0.28
FAM239B-202ENST00000424415 NUDT16Q96DE0 195 aaKnown RBP13.31□□□□□ -0.28
FAM239B-202ENST00000424415 KIF13AQ9H1H9 1805 aa13.3□□□□□ -0.28
FAM239B-202ENST00000424415 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.3□□□□□ -0.28
FAM239B-202ENST00000424415 MON2Q7Z3U7 1717 aa13.3□□□□□ -0.28
FAM239B-202ENST00000424415 PLEKHG1Q9ULL1 1385 aa13.3□□□□□ -0.28
FAM239B-202ENST00000424415 PRKAR2BP31323 418 aa13.3□□□□□ -0.28
FAM239B-202ENST00000424415 HAP1P54257 671 aaPredicted RBP13.3□□□□□ -0.28
FAM239B-202ENST00000424415 SKAP1Q86WV1 359 aa13.3□□□□□ -0.28
FAM239B-202ENST00000424415 TSR2Q969E8 191 aaKnown RBP13.3□□□□□ -0.28
FAM239B-202ENST00000424415 GNAI1P63096 354 aa13.29□□□□□ -0.28
FAM239B-202ENST00000424415 SSH1Q8WYL5 1049 aa13.29□□□□□ -0.28
FAM239B-202ENST00000424415 ARHGAP45Q92619 1136 aa13.29□□□□□ -0.28
FAM239B-202ENST00000424415 BCL2L13Q9BXK5 485 aa13.29□□□□□ -0.28
FAM239B-202ENST00000424415 IFT57Q9NWB7 429 aa13.29□□□□□ -0.28
FAM239B-202ENST00000424415 PCDHB15Q9Y5E8 787 aa13.29□□□□□ -0.28
FAM239B-202ENST00000424415 TRIM27P14373 513 aa13.28□□□□□ -0.28
FAM239B-202ENST00000424415 UBR1Q8IWV7 1749 aa13.28□□□□□ -0.28
FAM239B-202ENST00000424415 BECN1Q14457 450 aa13.28□□□□□ -0.28
FAM239B-202ENST00000424415 IL13P35225 146 aa13.27□□□□□ -0.28
FAM239B-202ENST00000424415 DEKP35659 375 aaKnown RBP13.27□□□□□ -0.28
FAM239B-202ENST00000424415 TXNDC2Q86VQ3 553 aa13.27□□□□□ -0.28
FAM239B-202ENST00000424415 AKAP12Q02952 1782 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms