RNA–Protein interactions for RNA: ENST00000418983.1

HCG4-201, Transcript of HLA complex group 4, humanhuman

BASIC

Gene HCG4, Length 998 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG4-201ENST00000418983 MON2Q7Z3U7 1717 aa23.19■■□□□ 1.3
HCG4-201ENST00000418983 CD163L1Q9NR16 1453 aa23.18■■□□□ 1.3
HCG4-201ENST00000418983 A0A1W2PP64 1363 aa23.17■■□□□ 1.3
HCG4-201ENST00000418983 KTN1Q86UP2 1357 aaKnown RBP23.17■■□□□ 1.3
HCG4-201ENST00000418983 PSME1Q06323 249 aa23.17■■□□□ 1.3
HCG4-201ENST00000418983 USP6P35125 1406 aa23.16■■□□□ 1.3
HCG4-201ENST00000418983 EDC4Q6P2E9 1401 aaKnown RBP23.16■■□□□ 1.3
HCG4-201ENST00000418983 FOXO3O43524 673 aa23.15■■□□□ 1.3
HCG4-201ENST00000418983 RXRBP28702 533 aa23.15■■□□□ 1.3
HCG4-201ENST00000418983 PANK3Q9H999 370 aa23.14■■□□□ 1.29
HCG4-201ENST00000418983 NRKQ7Z2Y5 1582 aa23.13■■□□□ 1.29
HCG4-201ENST00000418983 MEX3CQ5U5Q3 659 aaKnown RBP23.12■■□□□ 1.29
HCG4-201ENST00000418983 KRT28Q7Z3Y7 464 aa23.12■■□□□ 1.29
HCG4-201ENST00000418983 SBNO1A3KN83 1393 aa23.12■■□□□ 1.29
HCG4-201ENST00000418983 PXDNQ92626 1479 aa23.11■■□□□ 1.29
HCG4-201ENST00000418983 TTC21AQ8NDW8 1320 aa23.11■■□□□ 1.29
HCG4-201ENST00000418983 SOS2Q07890 1332 aaPredicted RBP23.1■■□□□ 1.29
HCG4-201ENST00000418983 RGS12O14924 1447 aa23.09■■□□□ 1.29
HCG4-201ENST00000418983 SSH2Q76I76 1423 aa23.09■■□□□ 1.29
HCG4-201ENST00000418983 NSD3Q9BZ95 1437 aa23.09■■□□□ 1.29
HCG4-201ENST00000418983 TRPM3Q9HCF6 1732 aaPredicted RBP23.09■■□□□ 1.29
HCG4-201ENST00000418983 DDX10Q13206 875 aaKnown RBP23.09■■□□□ 1.29
HCG4-201ENST00000418983 KNSTRNQ9Y448 316 aa23.08■■□□□ 1.29
HCG4-201ENST00000418983 CGNL1Q0VF96 1302 aa23.07■■□□□ 1.28
HCG4-201ENST00000418983 TNS3Q68CZ2 1445 aa23.06■■□□□ 1.28
HCG4-201ENST00000418983 TTC21BQ7Z4L5 1316 aa23.06■■□□□ 1.28
HCG4-201ENST00000418983 ARHGEF10O15013 1369 aa23.05■■□□□ 1.28
HCG4-201ENST00000418983 NSD2O96028 1365 aa23.05■■□□□ 1.28
HCG4-201ENST00000418983 LRRC59Q96AG4 307 aaKnown RBP23.05■■□□□ 1.28
HCG4-201ENST00000418983 CARD14Q9BXL6 1004 aa23.05■■□□□ 1.28
HCG4-201ENST00000418983 KIF20BQ96Q89 1820 aa23.04■■□□□ 1.28
HCG4-201ENST00000418983 PAK3O75914 559 aaPredicted RBP23.04■■□□□ 1.28
HCG4-201ENST00000418983 AFF2P51816 1311 aa23.04■■□□□ 1.28
HCG4-201ENST00000418983 ALS2Q96Q42 1657 aa23.03■■□□□ 1.28
HCG4-201ENST00000418983 XPCQ01831 940 aaPredicted RBP23.03■■□□□ 1.28
HCG4-201ENST00000418983 DDX17Q92841 729 aaKnown RBP23.03■■□□□ 1.28
HCG4-201ENST00000418983 SPATA31A3Q5VYP0 1347 aa23.03■■□□□ 1.28
HCG4-201ENST00000418983 NPC1L1Q9UHC9 1359 aa23.02■■□□□ 1.28
HCG4-201ENST00000418983 PER1O15534 1290 aaPredicted RBP23.02■■□□□ 1.28
HCG4-201ENST00000418983 USP54Q70EL1 1684 aa23■■□□□ 1.27
HCG4-201ENST00000418983 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23■■□□□ 1.27
HCG4-201ENST00000418983 ABTB2Q8N961 1025 aa23■■□□□ 1.27
HCG4-201ENST00000418983 PIK3C2AO00443 1686 aa23■■□□□ 1.27
HCG4-201ENST00000418983 USP31Q70CQ4 1352 aa22.99■■□□□ 1.27
HCG4-201ENST00000418983 ANKRD26Q9UPS8 1709 aa22.99■■□□□ 1.27
HCG4-201ENST00000418983 NLRP13Q86W25 1043 aa22.98■■□□□ 1.27
HCG4-201ENST00000418983 RBM6P78332 1123 aaKnown RBP22.97■■□□□ 1.27
HCG4-201ENST00000418983 FYB1O15117 783 aa22.96■■□□□ 1.27
HCG4-201ENST00000418983 AMER1Q5JTC6 1135 aaPredicted RBP22.96■■□□□ 1.27
HCG4-201ENST00000418983 LMOD2Q6P5Q4 547 aa22.96■■□□□ 1.27
HCG4-201ENST00000418983 COL22A1Q8NFW1 1626 aaPredicted RBP22.96■■□□□ 1.27
HCG4-201ENST00000418983 NME9Q86XW9 330 aa22.95■■□□□ 1.26
HCG4-201ENST00000418983 COG3Q96JB2 828 aa22.95■■□□□ 1.26
HCG4-201ENST00000418983 OVOS2A0A0J9YW53 1432 aa22.94■■□□□ 1.26
HCG4-201ENST00000418983 OVOS2Q6IE36 1432 aa22.94■■□□□ 1.26
HCG4-201ENST00000418983 NUTM2BA6NNL0 878 aaPredicted RBP22.94■■□□□ 1.26
HCG4-201ENST00000418983 NUTM2EB1AL46 878 aaPredicted RBP22.94■■□□□ 1.26
HCG4-201ENST00000418983 NLRP6P59044 892 aa22.94■■□□□ 1.26
HCG4-201ENST00000418983 NUTM2AQ8IVF1 878 aaPredicted RBP22.94■■□□□ 1.26
HCG4-201ENST00000418983 PNPLA6Q8IY17 1366 aa22.93■■□□□ 1.26
HCG4-201ENST00000418983 USP19O94966 1318 aa22.91■■□□□ 1.26
HCG4-201ENST00000418983 KCNH5Q8NCM2 988 aa22.91■■□□□ 1.26
HCG4-201ENST00000418983 GGNBP2Q9H3C7 697 aa22.91■■□□□ 1.26
HCG4-201ENST00000418983 EP400Q96L91 3159 aa22.91■■□□□ 1.26
HCG4-201ENST00000418983 QTRT2Q9H974 415 aaKnown RBP22.9■■□□□ 1.26
HCG4-201ENST00000418983 SLIT3O75094 1523 aa22.9■■□□□ 1.26
HCG4-201ENST00000418983 MARF1Q9Y4F3 1742 aaKnown RBP22.89■■□□□ 1.26
HCG4-201ENST00000418983 MORC1Q86VD1 984 aa22.88■■□□□ 1.25
HCG4-201ENST00000418983 PHRF1Q9P1Y6 1649 aaKnown RBP22.88■■□□□ 1.25
HCG4-201ENST00000418983 CRYBG1Q9Y4K1 1723 aa22.88■■□□□ 1.25
HCG4-201ENST00000418983 CC2D1BQ5T0F9 858 aaKnown RBP22.87■■□□□ 1.25
HCG4-201ENST00000418983 ABCA3Q99758 1704 aa22.86■■□□□ 1.25
HCG4-201ENST00000418983 RALBP1Q15311 655 aa22.86■■□□□ 1.25
HCG4-201ENST00000418983 NUTM2GQ5VZR2 741 aa22.86■■□□□ 1.25
HCG4-201ENST00000418983 HAP1P54257 671 aaPredicted RBP22.85■■□□□ 1.25
HCG4-201ENST00000418983 C8orf37Q96NL8 207 aa22.85■■□□□ 1.25
HCG4-201ENST00000418983 ANP32CO43423 234 aa22.84■■□□□ 1.25
HCG4-201ENST00000418983 ZRANB1Q9UGI0 708 aa22.84■■□□□ 1.25
HCG4-201ENST00000418983 AATKQ6ZMQ8 1374 aa22.84■■□□□ 1.25
HCG4-201ENST00000418983 PARD3Q8TEW0 1356 aa22.84■■□□□ 1.25
HCG4-201ENST00000418983 DIEXFQ68CQ4 756 aaKnown RBP22.83■■□□□ 1.25
HCG4-201ENST00000418983 NGLY1Q96IV0 654 aa22.83■■□□□ 1.25
HCG4-201ENST00000418983 GCP02774 474 aa22.82■■□□□ 1.24
HCG4-201ENST00000418983 NFAT5O94916 1531 aa22.82■■□□□ 1.24
HCG4-201ENST00000418983 ATRNO75882 1429 aa22.8■■□□□ 1.24
HCG4-201ENST00000418983 CPDO75976 1380 aa22.79■■□□□ 1.24
HCG4-201ENST00000418983 KIF24Q5T7B8 1368 aa22.79■■□□□ 1.24
HCG4-201ENST00000418983 PRKRIP1Q9H875 184 aaPredicted RBP22.79■■□□□ 1.24
HCG4-201ENST00000418983 ABCC6O95255 1503 aa22.78■■□□□ 1.24
HCG4-201ENST00000418983 CABLES1Q8TDN4 633 aa22.78■■□□□ 1.24
HCG4-201ENST00000418983 RTL1A6NKG5 1358 aa22.76■■□□□ 1.23
HCG4-201ENST00000418983 CNGB1Q14028 1251 aaPredicted RBP22.76■■□□□ 1.23
HCG4-201ENST00000418983 FNBP4Q8N3X1 1017 aaPredicted RBP22.76■■□□□ 1.23
HCG4-201ENST00000418983 LTN1O94822 1766 aa22.76■■□□□ 1.23
HCG4-201ENST00000418983 MAP2P11137 1827 aaKnown RBP22.75■■□□□ 1.23
HCG4-201ENST00000418983 PLEKHG5O94827 1062 aa22.75■■□□□ 1.23
HCG4-201ENST00000418983 MYBBP1AQ9BQG0 1328 aaKnown RBP22.75■■□□□ 1.23
HCG4-201ENST00000418983 SMG6Q86US8 1419 aaKnown RBP22.74■■□□□ 1.23
HCG4-201ENST00000418983 SOX12O15370 315 aa22.74■■□□□ 1.23
HCG4-201ENST00000418983 TNNT2P45379 298 aaPredicted RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms