RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 PRDM15P57071 1507 aaPredicted RBP7.08□□□□□ -1.28
RFFL-202ENST00000394597 PDCL3Q9H2J4 239 aa7.08□□□□□ -1.28
RFFL-202ENST00000394597 LRPPRCP42704 1394 aaKnown RBP7.08□□□□□ -1.28
RFFL-202ENST00000394597 FCHSD2O94868 740 aa7.08□□□□□ -1.28
RFFL-202ENST00000394597 ZKSCAN2Q63HK3 967 aa7.08□□□□□ -1.28
RFFL-202ENST00000394597 NME9Q86XW9 330 aa7.08□□□□□ -1.28
RFFL-202ENST00000394597 WDR63Q8IWG1 891 aa7.08□□□□□ -1.28
RFFL-202ENST00000394597 ABCC3O15438 1527 aa7.07□□□□□ -1.28
RFFL-202ENST00000394597 ASXL1Q8IXJ9 1541 aa7.07□□□□□ -1.28
RFFL-202ENST00000394597 PARD3Q8TEW0 1356 aa7.07□□□□□ -1.28
RFFL-202ENST00000394597 RRS1Q15050 365 aaKnown RBP7.07□□□□□ -1.28
RFFL-202ENST00000394597 C1orf141Q5JVX7 400 aa7.07□□□□□ -1.28
RFFL-202ENST00000394597 HSCBQ8IWL3 235 aa7.07□□□□□ -1.28
RFFL-202ENST00000394597 BCL2L13Q9BXK5 485 aa7.07□□□□□ -1.28
RFFL-202ENST00000394597 ARHGAP31Q2M1Z3 1444 aa7.07□□□□□ -1.28
RFFL-202ENST00000394597 CRBNQ96SW2 442 aa7.07□□□□□ -1.28
RFFL-202ENST00000394597 CARD14Q9BXL6 1004 aa7.07□□□□□ -1.28
RFFL-202ENST00000394597 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.07□□□□□ -1.28
RFFL-202ENST00000394597 PHF8Q9UPP1 1060 aa7.07□□□□□ -1.28
RFFL-202ENST00000394597 UGGT1Q9NYU2 1555 aa7.06□□□□□ -1.28
RFFL-202ENST00000394597 ESPNB1AK53 854 aa7.06□□□□□ -1.28
RFFL-202ENST00000394597 FYB1O15117 783 aa7.06□□□□□ -1.28
RFFL-202ENST00000394597 HSP90AB1P08238 724 aaKnown RBP7.06□□□□□ -1.28
RFFL-202ENST00000394597 MRE11P49959 708 aa7.06□□□□□ -1.28
RFFL-202ENST00000394597 EVA1CP58658 441 aa7.06□□□□□ -1.28
RFFL-202ENST00000394597 EFCAB6Q5THR3 1501 aa7.06□□□□□ -1.28
RFFL-202ENST00000394597 SULT6B1Q6IMI4 303 aa7.06□□□□□ -1.28
RFFL-202ENST00000394597 GBP4Q96PP9 640 aa7.06□□□□□ -1.28
RFFL-202ENST00000394597 TMEM2Q9UHN6 1383 aa7.06□□□□□ -1.28
RFFL-202ENST00000394597 ACEP12821 1306 aa7.06□□□□□ -1.28
RFFL-202ENST00000394597 MYOM2P54296 1465 aa7.06□□□□□ -1.28
RFFL-202ENST00000394597 TEFQ10587 303 aa7.06□□□□□ -1.28
RFFL-202ENST00000394597 KIAA1211Q6ZU35 1233 aa7.06□□□□□ -1.28
RFFL-202ENST00000394597 R3HCC1Q9Y3T6 440 aaKnown RBP7.06□□□□□ -1.28
RFFL-202ENST00000394597 TNNT3P45378 269 aaPredicted RBP7.05□□□□□ -1.28
RFFL-202ENST00000394597 CHAF1AQ13111 956 aaPredicted RBP7.05□□□□□ -1.28
RFFL-202ENST00000394597 GAS2L2Q8NHY3 880 aa7.05□□□□□ -1.28
RFFL-202ENST00000394597 RBM33Q96EV2 1170 aaKnown RBP7.05□□□□□ -1.28
RFFL-202ENST00000394597 DNAJC5Q9H3Z4 198 aa7.05□□□□□ -1.28
RFFL-202ENST00000394597 KIF1BO60333 1816 aa7.05□□□□□ -1.28
RFFL-202ENST00000394597 MTERF4Q7Z6M4 381 aaKnown RBP7.05□□□□□ -1.28
RFFL-202ENST00000394597 BBXQ8WY36 941 aaPredicted RBP7.05□□□□□ -1.28
RFFL-202ENST00000394597 WWC1Q8IX03 1113 aa7.05□□□□□ -1.28
RFFL-202ENST00000394597 SIRT1Q96EB6 747 aa7.05□□□□□ -1.28
RFFL-202ENST00000394597 KCNH5Q8NCM2 988 aa7.04□□□□□ -1.28
RFFL-202ENST00000394597 COG6Q9Y2V7 657 aa7.04□□□□□ -1.28
RFFL-202ENST00000394597 ERVK-7P63135 1459 aa7.04□□□□□ -1.28
RFFL-202ENST00000394597 KDM5CP41229 1560 aa7.04□□□□□ -1.28
RFFL-202ENST00000394597 INO80Q9ULG1 1556 aaPredicted RBP7.04□□□□□ -1.28
RFFL-202ENST00000394597 ABCC11Q96J66 1382 aa7.04□□□□□ -1.28
RFFL-202ENST00000394597 TMPOP42166 694 aaKnown RBP7.04□□□□□ -1.28
RFFL-202ENST00000394597 SLFN5Q08AF3 891 aa7.04□□□□□ -1.28
RFFL-202ENST00000394597 RAPGEF4Q8WZA2 1011 aa7.04□□□□□ -1.28
RFFL-202ENST00000394597 PPIP5K1Q6PFW1 1433 aa7.04□□□□□ -1.28
RFFL-202ENST00000394597 NPC1L1Q9UHC9 1359 aa7.04□□□□□ -1.28
RFFL-202ENST00000394597 DDX11L8A8MPP1 907 aa7.04□□□□□ -1.28
RFFL-202ENST00000394597 LTKP29376 864 aa7.04□□□□□ -1.28
RFFL-202ENST00000394597 DZIP1LQ8IYY4 767 aaKnown RBP7.04□□□□□ -1.28
RFFL-202ENST00000394597 NLRP2Q9NX02 1062 aa7.04□□□□□ -1.28
RFFL-202ENST00000394597 ZHX1Q9UKY1 873 aaPredicted RBP7.04□□□□□ -1.28
RFFL-202ENST00000394597 EMILIN1Q9Y6C2 1016 aa7.04□□□□□ -1.28
RFFL-202ENST00000394597 GLI2P10070 1586 aa7.04□□□□□ -1.28
RFFL-202ENST00000394597 SBNO2Q9Y2G9 1366 aa7.03□□□□□ -1.28
RFFL-202ENST00000394597 PLCB2Q00722 1185 aa7.03□□□□□ -1.28
RFFL-202ENST00000394597 TSPYL4Q9UJ04 414 aa7.03□□□□□ -1.28
RFFL-202ENST00000394597 RNF123Q5XPI4 1314 aa7.03□□□□□ -1.28
RFFL-202ENST00000394597 EXOSC9Q06265 439 aaKnown RBP7.03□□□□□ -1.28
RFFL-202ENST00000394597 SLC4A10Q6U841 1118 aa7.03□□□□□ -1.28
RFFL-202ENST00000394597 CENPQQ7L2Z9 268 aaPredicted RBP7.03□□□□□ -1.28
RFFL-202ENST00000394597 ZNF771Q7L3S4 317 aaPredicted RBP7.03□□□□□ -1.28
RFFL-202ENST00000394597 CCDC9Q9Y3X0 531 aaKnown RBP7.03□□□□□ -1.28
RFFL-202ENST00000394597 TTC21BQ7Z4L5 1316 aa7.03□□□□□ -1.28
RFFL-202ENST00000394597 LMTK2Q8IWU2 1503 aa7.03□□□□□ -1.28
RFFL-202ENST00000394597 FOXO3O43524 673 aa7.03□□□□□ -1.28
RFFL-202ENST00000394597 XPCQ01831 940 aaPredicted RBP7.03□□□□□ -1.28
RFFL-202ENST00000394597 NFE2L2Q16236 605 aa7.03□□□□□ -1.28
RFFL-202ENST00000394597 PLEKHO1Q53GL0 409 aaPredicted RBP7.03□□□□□ -1.28
RFFL-202ENST00000394597 CASC1Q6TDU7 716 aa7.03□□□□□ -1.28
RFFL-202ENST00000394597 API5Q9BZZ5 524 aaKnown RBP7.03□□□□□ -1.28
RFFL-202ENST00000394597 CLTCL1P53675 1640 aa7.03□□□□□ -1.28
RFFL-202ENST00000394597 CT47B1P0C2W7 299 aaPredicted RBP7.03□□□□□ -1.28
RFFL-202ENST00000394597 PDIA4P13667 645 aaKnown RBP7.03□□□□□ -1.28
RFFL-202ENST00000394597 KCNA6P17658 529 aa7.03□□□□□ -1.28
RFFL-202ENST00000394597 CLCN1P35523 988 aa7.03□□□□□ -1.28
RFFL-202ENST00000394597 KIAA2012Q0VF49 1180 aa7.03□□□□□ -1.28
RFFL-202ENST00000394597 OS9Q13438 667 aaPredicted RBP7.03□□□□□ -1.28
RFFL-202ENST00000394597 KIF16BQ96L93 1317 aa7.02□□□□□ -1.28
RFFL-202ENST00000394597 PIK3C2GO75747 1445 aa7.02□□□□□ -1.29
RFFL-202ENST00000394597 RNF17Q9BXT8 1623 aaKnown RBP7.02□□□□□ -1.29
RFFL-202ENST00000394597 PRDM10Q9NQV6 1147 aa7.02□□□□□ -1.29
RFFL-202ENST00000394597 DDX19BQ9UMR2 479 aa7.02□□□□□ -1.29
RFFL-202ENST00000394597 HDAC5Q9UQL6 1122 aa7.02□□□□□ -1.29
RFFL-202ENST00000394597 TTC21AQ8NDW8 1320 aa7.02□□□□□ -1.29
RFFL-202ENST00000394597 SPHKAPQ2M3C7 1700 aa7.02□□□□□ -1.29
RFFL-202ENST00000394597 PTMSP20962 102 aa7.02□□□□□ -1.29
RFFL-202ENST00000394597 RRAGDQ9NQL2 400 aaPredicted RBP7.02□□□□□ -1.29
RFFL-202ENST00000394597 NCKAP5LQ9HCH0 1330 aa7.02□□□□□ -1.29
RFFL-202ENST00000394597 A0A1W2PP64 1363 aa7.02□□□□□ -1.29
RFFL-202ENST00000394597 POLR3AO14802 1390 aaPredicted RBP7.02□□□□□ -1.29
RFFL-202ENST00000394597 AAMPQ13685 434 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms