RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 PLOD2O00469 737 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 TBX3O15119 743 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 RAD51BO15315 384 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 RGS16O15492 202 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-219ENST00000542112 NCK2O43639 380 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 PI15O43692 258 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 SPOPO43791 374 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 CDH16O75309 829 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 TBX10O75333 385 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 SPAG7O75391 227 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 PSIP1O75475 530 aaKnown RBP4.45□□□□□ -1.7
SNHG1-219ENST00000542112 CRTAPO75718 401 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-219ENST00000542112 KRT37O76014 449 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 CHRNA1P02708 482 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 TFRCP02786 760 aaKnown RBP4.45□□□□□ -1.7
SNHG1-219ENST00000542112 NFICP08651 508 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 CD48P09326 243 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 MYL6BP14649 208 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 HPGDP15428 266 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 GM2AP17900 193 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 MUTP22033 750 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 CXCR2P25025 360 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 COL8A1P27658 744 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 IGHMBP2P38935 993 aaKnown RBP4.45□□□□□ -1.7
SNHG1-219ENST00000542112 SYKP43405 635 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 AFMP43652 599 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 IREB2P48200 963 aaKnown RBP4.45□□□□□ -1.7
SNHG1-219ENST00000542112 ALDH3B2P48448 385 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 PRIM2P49643 509 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 STARP49675 285 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 CLK3P49761 638 aaKnown RBP4.45□□□□□ -1.7
SNHG1-219ENST00000542112 DRG2P55039 364 aaKnown RBP4.45□□□□□ -1.7
SNHG1-219ENST00000542112 HSD17B7P56937 341 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 KDSRQ06136 332 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 SSRP1Q08945 709 aaKnown RBP4.45□□□□□ -1.7
SNHG1-219ENST00000542112 C2orf54Q08AI8 447 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 FAPQ12884 760 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 RALGDSQ12967 914 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 STRN3Q13033 797 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 CDC16Q13042 620 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 SIM2Q14190 667 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-219ENST00000542112 MBTPS1Q14703 1052 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 POU6F1Q14863 301 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 TCEAL1Q15170 157 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 SPA17Q15506 151 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 ZNF124Q15973 351 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 SMU1Q2TAY7 513 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 PLEKHG6Q3KR16 790 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 TBRG1Q3YBR2 411 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 MMEL1Q495T6 779 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 DNAL1Q4LDG9 190 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 FIGNQ5HY92 759 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 CDPF1Q6NVV7 123 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 IZUMO2Q6UXV1 221 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 KSR2Q6VAB6 950 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 KYAT3Q6YP21 454 aaKnown RBP4.45□□□□□ -1.7
SNHG1-219ENST00000542112 EPM2AIP1Q7L775 607 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-219ENST00000542112 TXNRD3Q86VQ6 643 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 RASSF3Q86WH2 238 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 DNAAF5Q86Y56 855 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 GATAD2AQ86YP4 633 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 SLC44A2Q8IWA5 706 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-219ENST00000542112 TMEM192Q8IY95 271 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 GSPT2Q8IYD1 628 aaKnown RBP4.45□□□□□ -1.7
SNHG1-219ENST00000542112 COLGALT2Q8IYK4 626 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 KIAA2013Q8IYS2 634 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 UBE2J2Q8N2K1 259 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 FAM109AQ8N4B1 249 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 KIF2BQ8N4N8 673 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 VGLL2Q8N8G2 317 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 PCSK9Q8NBP7 692 aaKnown RBP4.45□□□□□ -1.7
SNHG1-219ENST00000542112 LINC00301Q8NCQ3 95 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 ICA1LQ8NDH6 482 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 ZNF680Q8NEM1 530 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 CDC26Q8NHZ8 85 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 NCOA7Q8NI08 942 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 HM13Q8TCT9 377 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 GANCQ8TET4 914 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 FNIP1Q8TF40 1166 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 CKAP2Q8WWK9 683 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 ZNF606Q8WXB4 792 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 S100ZQ8WXG8 99 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 MYDGFQ969H8 173 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 NCLNQ969V3 563 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 MCUR1Q96AQ8 359 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 TAMM41Q96BW9 452 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 SLC7A6OSQ96CW6 309 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-219ENST00000542112 HDAC11Q96DB2 347 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 APOPT1Q96IL0 206 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 FAR2Q96K12 515 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 FAM167AQ96KS9 214 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 MYRFLQ96LU7 910 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 UBL7Q96S82 380 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-219ENST00000542112 TRAF4Q9BUZ4 470 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-219ENST00000542112 WDR12Q9GZL7 423 aaKnown RBP4.45□□□□□ -1.7
SNHG1-219ENST00000542112 SENP6Q9GZR1 1112 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-219ENST00000542112 HOXD1Q9GZZ0 328 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 LMAN2LQ9H0V9 348 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 SLC6A15Q9H2J7 730 aa4.45□□□□□ -1.7
SNHG1-219ENST00000542112 SLC12A5Q9H2X9 1139 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms