RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 GAB4Q2WGN9 574 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 SLC44A4Q53GD3 710 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 C6orf118Q5T5N4 469 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 TFAP2DQ7Z6R9 452 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 SETD3Q86TU7 594 aaPredicted RBP15.65■□□□□ 0.1
SNIP1-202ENST00000468040 NLRP14Q86W24 1093 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 CIR1Q86X95 450 aaPredicted RBP15.65■□□□□ 0.1
SNIP1-202ENST00000468040 CCDC50Q8IVM0 306 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 SUGP1Q8IWZ8 645 aaKnown RBP15.65■□□□□ 0.1
SNIP1-202ENST00000468040 SLC35F6Q8N357 371 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 C17orf53Q8N3J3 647 aaPredicted RBP15.65■□□□□ 0.1
SNIP1-202ENST00000468040 CARNMT1Q8N4J0 409 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 RTL3Q8N8U3 475 aaKnown RBP15.65■□□□□ 0.1
SNIP1-202ENST00000468040 FIBINQ8TAL6 211 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 ALG3Q92685 438 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 RNF25Q96BH1 459 aaPredicted RBP15.65■□□□□ 0.1
SNIP1-202ENST00000468040 FAF2Q96CS3 445 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 P2RY11Q96G91 374 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 PRDM16Q9HAZ2 1276 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 ARHGEF4Q9NR80 690 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 HEBP1Q9NRV9 189 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 DNAJC17Q9NVM6 304 aaKnown RBP15.65■□□□□ 0.1
SNIP1-202ENST00000468040 TMEM248Q9NWD8 314 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 DEC1Q9P2X7 70 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 FBXL21Q9UKT6 434 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 TBC1D30Q9Y2I9 924 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 C3orf70A6NLC5 250 aaPredicted RBP15.64■□□□□ 0.09
SNIP1-202ENST00000468040 ERCC2P18074 760 aa15.64■□□□□ 0.09
SNIP1-202ENST00000468040 IL4RP24394 825 aa15.64■□□□□ 0.09
SNIP1-202ENST00000468040 CDKN2BP42772 138 aa15.64■□□□□ 0.09
SNIP1-202ENST00000468040 DGKGP49619 791 aa15.64■□□□□ 0.09
SNIP1-202ENST00000468040 PRKCQQ04759 706 aa15.64■□□□□ 0.09
SNIP1-202ENST00000468040 MLF2Q15773 248 aaPredicted RBP15.64■□□□□ 0.09
SNIP1-202ENST00000468040 TAZQ16635 292 aa15.64■□□□□ 0.09
SNIP1-202ENST00000468040 ANKRD20A8PQ5CZ79 823 aa15.64■□□□□ 0.09
SNIP1-202ENST00000468040 TFDP3Q5H9I0 405 aa15.64■□□□□ 0.09
SNIP1-202ENST00000468040 TMCO3Q6UWJ1 677 aa15.64■□□□□ 0.09
SNIP1-202ENST00000468040 ZNF783Q6ZMS7 281 aa15.64■□□□□ 0.09
SNIP1-202ENST00000468040 NAT16Q8N8M0 369 aa15.64■□□□□ 0.09
SNIP1-202ENST00000468040 MAK16Q9BXY0 300 aaKnown RBP15.64■□□□□ 0.09
SNIP1-202ENST00000468040 ARHGEF3Q9NR81 526 aa15.64■□□□□ 0.09
SNIP1-202ENST00000468040 KIAA1522Q9P206 1035 aaPredicted RBP15.64■□□□□ 0.09
SNIP1-202ENST00000468040 ZNF212Q9UDV6 495 aa15.64■□□□□ 0.09
SNIP1-202ENST00000468040 FBXO10Q9UK96 956 aa15.64■□□□□ 0.09
SNIP1-202ENST00000468040 SLC27A6Q9Y2P4 619 aa15.64■□□□□ 0.09
SNIP1-202ENST00000468040 MAN2B1O00754 1011 aa15.63■□□□□ 0.09
SNIP1-202ENST00000468040 RHOCP08134 193 aa15.63■□□□□ 0.09
SNIP1-202ENST00000468040 DEKP35659 375 aaKnown RBP15.63■□□□□ 0.09
SNIP1-202ENST00000468040 ETFBP38117 255 aa15.63■□□□□ 0.09
SNIP1-202ENST00000468040 OPRD1P41143 372 aa15.63■□□□□ 0.09
SNIP1-202ENST00000468040 SOX9P48436 509 aa15.63■□□□□ 0.09
SNIP1-202ENST00000468040 DNA2P51530 1060 aa15.63■□□□□ 0.09
SNIP1-202ENST00000468040 MMRN1Q13201 1228 aa15.63■□□□□ 0.09
SNIP1-202ENST00000468040 SLC12A1Q13621 1099 aa15.63■□□□□ 0.09
SNIP1-202ENST00000468040 TFDP2Q14188 446 aa15.63■□□□□ 0.09
SNIP1-202ENST00000468040 PPP2R5EQ16537 467 aa15.63■□□□□ 0.09
SNIP1-202ENST00000468040 GRAMD4Q6IC98 578 aa15.63■□□□□ 0.09
SNIP1-202ENST00000468040 MFSD7Q6UXD7 560 aa15.63■□□□□ 0.09
SNIP1-202ENST00000468040 SPOCD1Q6ZMY3 1216 aa15.63■□□□□ 0.09
SNIP1-202ENST00000468040 TPRG1Q6ZUI0 275 aa15.63■□□□□ 0.09
SNIP1-202ENST00000468040 NUDT18Q6ZVK8 323 aa15.63■□□□□ 0.09
SNIP1-202ENST00000468040 ZSCAN30Q86W11 494 aa15.63■□□□□ 0.09
SNIP1-202ENST00000468040 C12orf40Q86WS4 652 aa15.63■□□□□ 0.09
SNIP1-202ENST00000468040 LZTR1Q8N653 840 aa15.63■□□□□ 0.09
SNIP1-202ENST00000468040 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.63■□□□□ 0.09
SNIP1-202ENST00000468040 CHFRQ96EP1 664 aa15.63■□□□□ 0.09
SNIP1-202ENST00000468040 SHDQ96IW2 340 aa15.63■□□□□ 0.09
SNIP1-202ENST00000468040 RNF157Q96PX1 679 aa15.63■□□□□ 0.09
SNIP1-202ENST00000468040 PNKPQ96T60 521 aa15.63■□□□□ 0.09
SNIP1-202ENST00000468040 P2RY13Q9BPV8 354 aa15.63■□□□□ 0.09
SNIP1-202ENST00000468040 TLR10Q9BXR5 811 aa15.63■□□□□ 0.09
SNIP1-202ENST00000468040 CARD9Q9H257 536 aa15.63■□□□□ 0.09
SNIP1-202ENST00000468040 EFR3BQ9Y2G0 817 aa15.63■□□□□ 0.09
SNIP1-202ENST00000468040 DOCK4Q8N1I0 1966 aa15.63■□□□□ 0.09
SNIP1-202ENST00000468040 KCNK3O14649 394 aa15.62■□□□□ 0.09
SNIP1-202ENST00000468040 DCLK1O15075 740 aa15.62■□□□□ 0.09
SNIP1-202ENST00000468040 ZFXP17010 805 aaPredicted RBP15.62■□□□□ 0.09
SNIP1-202ENST00000468040 AMPD1P23109 780 aa15.62■□□□□ 0.09
SNIP1-202ENST00000468040 HLA-FP30511 346 aa15.62■□□□□ 0.09
SNIP1-202ENST00000468040 PTPN7P35236 360 aa15.62■□□□□ 0.09
SNIP1-202ENST00000468040 SERPINB6P35237 376 aa15.62■□□□□ 0.09
SNIP1-202ENST00000468040 ZXDAP98168 799 aa15.62■□□□□ 0.09
SNIP1-202ENST00000468040 CXorf57Q6NSI4 855 aaKnown RBP15.62■□□□□ 0.09
SNIP1-202ENST00000468040 ANKS1BQ7Z6G8 1248 aa15.62■□□□□ 0.09
SNIP1-202ENST00000468040 AHI1Q8N157 1196 aa15.62■□□□□ 0.09
SNIP1-202ENST00000468040 UMODL1-AS1Q8N2C9 162 aa15.62■□□□□ 0.09
SNIP1-202ENST00000468040 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.62■□□□□ 0.09
SNIP1-202ENST00000468040 PCDH19Q8TAB3 1148 aa15.62■□□□□ 0.09
SNIP1-202ENST00000468040 WFIKKN2Q8TEU8 576 aa15.62■□□□□ 0.09
SNIP1-202ENST00000468040 FAM3CQ92520 227 aa15.62■□□□□ 0.09
SNIP1-202ENST00000468040 ABCB8Q9NUT2 735 aa15.62■□□□□ 0.09
SNIP1-202ENST00000468040 DNAI1Q9UI46 699 aa15.62■□□□□ 0.09
SNIP1-202ENST00000468040 CA14Q9ULX7 337 aa15.62■□□□□ 0.09
SNIP1-202ENST00000468040 CLEC4EQ9ULY5 219 aa15.62■□□□□ 0.09
SNIP1-202ENST00000468040 MYOFQ9NZM1 2061 aa15.62■□□□□ 0.09
SNIP1-202ENST00000468040 KIAA1549LQ6ZVL6 1849 aa15.61■□□□□ 0.09
SNIP1-202ENST00000468040 hCG_1818297A0A087WSY0 165 aa15.61■□□□□ 0.09
SNIP1-202ENST00000468040 ILVBLA1L0T0 632 aa15.61■□□□□ 0.09
SNIP1-202ENST00000468040 ENC1O14682 589 aa15.61■□□□□ 0.09
SNIP1-202ENST00000468040 APOL1O14791 398 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms