RNA–Protein interactions for RNA: ENST00000464833.1

CHRD-211, Transcript of chordin, humanhuman

TSL 5

Gene CHRD, Length 1,340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-211ENST00000464833 INTS6Q9UL03 887 aaKnown RBP28.45■■■□□ 2.15
CHRD-211ENST00000464833 USP18Q9UMW8 372 aa28.45■■■□□ 2.15
CHRD-211ENST00000464833 REXO2Q9Y3B8 237 aaKnown RBP28.45■■■□□ 2.15
CHRD-211ENST00000464833 PROSCO94903 275 aa28.44■■■□□ 2.14
CHRD-211ENST00000464833 TCF4P15884 667 aa28.44■■■□□ 2.14
CHRD-211ENST00000464833 CCR3P51677 355 aa28.44■■■□□ 2.14
CHRD-211ENST00000464833 FUT11Q495W5 492 aa28.44■■■□□ 2.14
CHRD-211ENST00000464833 HSF5Q4G112 596 aaPredicted RBP28.44■■■□□ 2.14
CHRD-211ENST00000464833 ERMARDQ5T6L9 678 aa28.44■■■□□ 2.14
CHRD-211ENST00000464833 ALLCQ8N6M5 410 aa28.44■■■□□ 2.14
CHRD-211ENST00000464833 ACDQ96AP0 544 aa28.44■■■□□ 2.14
CHRD-211ENST00000464833 ZYG11BQ9C0D3 744 aa28.44■■■□□ 2.14
CHRD-211ENST00000464833 ZDHHC4Q9NPG8 344 aa28.44■■■□□ 2.14
CHRD-211ENST00000464833 LUC7LQ9NQ29 371 aaKnown RBP28.44■■■□□ 2.14
CHRD-211ENST00000464833 GPATCH2LQ9NWQ4 482 aa28.44■■■□□ 2.14
CHRD-211ENST00000464833 KIAA1522Q9P206 1035 aaPredicted RBP28.44■■■□□ 2.14
CHRD-211ENST00000464833 LCMT1Q9UIC8 334 aa28.44■■■□□ 2.14
CHRD-211ENST00000464833 AP4E1Q9UPM8 1137 aa28.44■■■□□ 2.14
CHRD-211ENST00000464833 TBC1D30Q9Y2I9 924 aa28.44■■■□□ 2.14
CHRD-211ENST00000464833 MUC22E2RYF6 1773 aaPredicted RBP28.44■■■□□ 2.14
CHRD-211ENST00000464833 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP28.43■■■□□ 2.14
CHRD-211ENST00000464833 TIMM44O43615 452 aa28.43■■■□□ 2.14
CHRD-211ENST00000464833 PAPSS2O95340 614 aaPredicted RBP28.43■■■□□ 2.14
CHRD-211ENST00000464833 HNRNPLP14866 589 aaKnown RBP eCLIP28.43■■■□□ 2.14
CHRD-211ENST00000464833 IL1R2P27930 398 aa28.43■■■□□ 2.14
CHRD-211ENST00000464833 SATB1Q01826 763 aa28.43■■■□□ 2.14
CHRD-211ENST00000464833 ZNF177Q13360 481 aaPredicted RBP28.43■■■□□ 2.14
CHRD-211ENST00000464833 PSTKQ8IV42 348 aaKnown RBP28.43■■■□□ 2.14
CHRD-211ENST00000464833 OR52K2Q8NGK3 314 aa28.43■■■□□ 2.14
CHRD-211ENST00000464833 MMP17Q9ULZ9 603 aa28.43■■■□□ 2.14
CHRD-211ENST00000464833 LAMTOR5O43504 91 aa28.43■■■□□ 2.14
CHRD-211ENST00000464833 KLF8O95600 359 aaPredicted RBP28.43■■■□□ 2.14
CHRD-211ENST00000464833 CXCL12P48061 93 aa28.43■■■□□ 2.14
CHRD-211ENST00000464833 SLC25A11Q02978 314 aaKnown RBP28.43■■■□□ 2.14
CHRD-211ENST00000464833 SLC12A1Q13621 1099 aa28.43■■■□□ 2.14
CHRD-211ENST00000464833 CA9Q16790 459 aa28.43■■■□□ 2.14
CHRD-211ENST00000464833 MBLAC2Q68D91 279 aa28.43■■■□□ 2.14
CHRD-211ENST00000464833 SYT13Q7L8C5 426 aa28.43■■■□□ 2.14
CHRD-211ENST00000464833 CCDC33Q8N5R6 958 aa28.43■■■□□ 2.14
CHRD-211ENST00000464833 TBC1D31Q96DN5 1066 aa28.43■■■□□ 2.14
CHRD-211ENST00000464833 PRRX2Q99811 253 aa28.43■■■□□ 2.14
CHRD-211ENST00000464833 CIPCQ9C0C6 399 aa28.43■■■□□ 2.14
CHRD-211ENST00000464833 POLR3BQ9NW08 1133 aaPredicted RBP28.43■■■□□ 2.14
CHRD-211ENST00000464833 TFR2Q9UP52 801 aa28.43■■■□□ 2.14
CHRD-211ENST00000464833 ADAM23O75077 832 aa28.42■■■□□ 2.14
CHRD-211ENST00000464833 IPO7O95373 1038 aaKnown RBP28.42■■■□□ 2.14
CHRD-211ENST00000464833 HOXC13P31276 330 aa28.42■■■□□ 2.14
CHRD-211ENST00000464833 MAN1A1P33908 653 aa28.42■■■□□ 2.14
CHRD-211ENST00000464833 OXCT1P55809 520 aa28.42■■■□□ 2.14
CHRD-211ENST00000464833 DMC1Q14565 340 aa28.42■■■□□ 2.14
CHRD-211ENST00000464833 ANGPT1Q15389 498 aa28.42■■■□□ 2.14
CHRD-211ENST00000464833 PLEKHG6Q3KR16 790 aa28.42■■■□□ 2.14
CHRD-211ENST00000464833 PITRM1Q5JRX3 1037 aa28.42■■■□□ 2.14
CHRD-211ENST00000464833 TRMT11Q7Z4G4 463 aaKnown RBP28.42■■■□□ 2.14
CHRD-211ENST00000464833 TFAP2DQ7Z6R9 452 aa28.42■■■□□ 2.14
CHRD-211ENST00000464833 NLRP14Q86W24 1093 aa28.42■■■□□ 2.14
CHRD-211ENST00000464833 CPNE8Q86YQ8 564 aa28.42■■■□□ 2.14
CHRD-211ENST00000464833 TXNDC5Q8NBS9 432 aaKnown RBP28.42■■■□□ 2.14
CHRD-211ENST00000464833 ACRBPQ8NEB7 543 aa28.42■■■□□ 2.14
CHRD-211ENST00000464833 PRSS33Q8NF86 280 aa28.42■■■□□ 2.14
CHRD-211ENST00000464833 UCMAQ8WVF2 138 aa28.42■■■□□ 2.14
CHRD-211ENST00000464833 SORCS1Q8WY21 1168 aa28.42■■■□□ 2.14
CHRD-211ENST00000464833 TTC17Q96AE7 1141 aa28.42■■■□□ 2.14
CHRD-211ENST00000464833 ALG14Q96F25 216 aa28.42■■■□□ 2.14
CHRD-211ENST00000464833 ACOX2Q99424 681 aa28.42■■■□□ 2.14
CHRD-211ENST00000464833 EPAS1Q99814 870 aa28.42■■■□□ 2.14
CHRD-211ENST00000464833 RETREG1Q9H6L5 497 aa28.42■■■□□ 2.14
CHRD-211ENST00000464833 THAP10Q9P2Z0 257 aaPredicted RBP28.42■■■□□ 2.14
CHRD-211ENST00000464833 CHD5Q8TDI0 1954 aa28.41■■■□□ 2.14
CHRD-211ENST00000464833 RCCD1A6NED2 376 aa28.41■■■□□ 2.14
CHRD-211ENST00000464833 SGK1O00141 431 aa28.41■■■□□ 2.14
CHRD-211ENST00000464833 RHOQP17081 205 aa28.41■■■□□ 2.14
CHRD-211ENST00000464833 MZF1P28698 734 aaPredicted RBP28.41■■■□□ 2.14
CHRD-211ENST00000464833 CSKP41240 450 aa28.41■■■□□ 2.14
CHRD-211ENST00000464833 ARHGAP25P42331 645 aa28.41■■■□□ 2.14
CHRD-211ENST00000464833 PLK1P53350 603 aa28.41■■■□□ 2.14
CHRD-211ENST00000464833 HADHBP55084 474 aaKnown RBP28.41■■■□□ 2.14
CHRD-211ENST00000464833 BOLA3Q53S33 107 aa28.41■■■□□ 2.14
CHRD-211ENST00000464833 RWDD4Q6NW29 188 aaKnown RBP28.41■■■□□ 2.14
CHRD-211ENST00000464833 SETD3Q86TU7 594 aaPredicted RBP28.41■■■□□ 2.14
CHRD-211ENST00000464833 APCDD1Q8J025 514 aa28.41■■■□□ 2.14
CHRD-211ENST00000464833 KCNH6Q9H252 994 aa28.41■■■□□ 2.14
CHRD-211ENST00000464833 DHX35Q9H5Z1 703 aaKnown RBP28.41■■■□□ 2.14
CHRD-211ENST00000464833 FBXO4Q9UKT5 387 aa28.41■■■□□ 2.14
CHRD-211ENST00000464833 OR51B4Q9Y5P0 310 aa28.41■■■□□ 2.14
CHRD-211ENST00000464833 TDGF1P13385 188 aa28.4■■■□□ 2.14
CHRD-211ENST00000464833 POLR2EP19388 210 aaKnown RBP28.4■■■□□ 2.14
CHRD-211ENST00000464833 ENPP2Q13822 863 aa28.4■■■□□ 2.14
CHRD-211ENST00000464833 MESDQ14696 234 aa28.4■■■□□ 2.14
CHRD-211ENST00000464833 TXNRD3NBQ6F5E7 133 aa28.4■■■□□ 2.14
CHRD-211ENST00000464833 TEKT4Q8WW24 435 aa28.4■■■□□ 2.14
CHRD-211ENST00000464833 KCTD15Q96SI1 283 aaPredicted RBP28.4■■■□□ 2.14
CHRD-211ENST00000464833 TMEM248Q9NWD8 314 aa28.4■■■□□ 2.14
CHRD-211ENST00000464833 A0A0A6YYK5 440 aaPredicted RBP28.39■■■□□ 2.13
CHRD-211ENST00000464833 K7ESF4 209 aa28.39■■■□□ 2.13
CHRD-211ENST00000464833 NPC1O15118 1278 aa28.39■■■□□ 2.13
CHRD-211ENST00000464833 CREB3O43889 395 aa28.39■■■□□ 2.13
CHRD-211ENST00000464833 DLDP09622 509 aaKnown RBP28.39■■■□□ 2.13
CHRD-211ENST00000464833 OR1E1P30953 314 aa28.39■■■□□ 2.13
CHRD-211ENST00000464833 NTSR1P30989 418 aa28.39■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms