RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 CSH1P0DML2 217 aa8.78□□□□□ -1
HPS4-206ENST00000439453 CSH2P0DML3 217 aa8.78□□□□□ -1
HPS4-206ENST00000439453 TBXAS1P24557 533 aaPredicted RBP8.78□□□□□ -1
HPS4-206ENST00000439453 ROR1Q01973 937 aa8.78□□□□□ -1
HPS4-206ENST00000439453 PLOD1Q02809 727 aaPredicted RBP8.78□□□□□ -1
HPS4-206ENST00000439453 HADHQ16836 314 aaKnown RBP8.78□□□□□ -1
HPS4-206ENST00000439453 USP41Q3LFD5 358 aa8.78□□□□□ -1
HPS4-206ENST00000439453 RARS2Q5T160 578 aaKnown RBP8.78□□□□□ -1
HPS4-206ENST00000439453 FAM182AQ5T1J6 154 aa8.78□□□□□ -1
HPS4-206ENST00000439453 MBLAC2Q68D91 279 aa8.78□□□□□ -1
HPS4-206ENST00000439453 ABHD15Q6UXT9 468 aa8.78□□□□□ -1
HPS4-206ENST00000439453 TRIM67Q6ZTA4 783 aa8.78□□□□□ -1
HPS4-206ENST00000439453 SPATA18Q8TC71 538 aa8.78□□□□□ -1
HPS4-206ENST00000439453 HSPBAP1Q96EW2 488 aa8.78□□□□□ -1
HPS4-206ENST00000439453 LRGUKQ96M69 825 aa8.78□□□□□ -1
HPS4-206ENST00000439453 NTPCRQ9BSD7 190 aaKnown RBP8.78□□□□□ -1
HPS4-206ENST00000439453 MTG1Q9BT17 334 aaPredicted RBP8.78□□□□□ -1
HPS4-206ENST00000439453 DHX33Q9H6R0 707 aaKnown RBP8.78□□□□□ -1
HPS4-206ENST00000439453 PLAC1Q9HBJ0 212 aa8.78□□□□□ -1
HPS4-206ENST00000439453 ANKEF1Q9NU02 776 aa8.78□□□□□ -1
HPS4-206ENST00000439453 AK5Q9Y6K8 562 aa8.78□□□□□ -1
HPS4-206ENST00000439453 HMX2A2RU54 273 aa8.78□□□□□ -1
HPS4-206ENST00000439453 CEP290O15078 2479 aa8.78□□□□□ -1
HPS4-206ENST00000439453 LRCH4O75427 683 aa8.78□□□□□ -1
HPS4-206ENST00000439453 FBXO21O94952 628 aa8.78□□□□□ -1
HPS4-206ENST00000439453 LSM8O95777 96 aaKnown RBP8.78□□□□□ -1
HPS4-206ENST00000439453 NCF2P19878 526 aaPredicted RBP8.78□□□□□ -1
HPS4-206ENST00000439453 ACAT1P24752 427 aaKnown RBP8.78□□□□□ -1
HPS4-206ENST00000439453 RPL10AP62906 217 aaKnown RBP8.78□□□□□ -1
HPS4-206ENST00000439453 LPIN1Q14693 890 aa8.78□□□□□ -1
HPS4-206ENST00000439453 LRRC8BQ6P9F7 803 aa8.78□□□□□ -1
HPS4-206ENST00000439453 C7orf61Q8IZ16 206 aa8.78□□□□□ -1
HPS4-206ENST00000439453 TMEM35BQ8NCS4 154 aa8.78□□□□□ -1
HPS4-206ENST00000439453 FNDC8Q8TC99 324 aa8.78□□□□□ -1
HPS4-206ENST00000439453 JPH1Q9HDC5 661 aaPredicted RBP8.78□□□□□ -1
HPS4-206ENST00000439453 PNPOQ9NVS9 261 aa8.78□□□□□ -1
HPS4-206ENST00000439453 DNAJC28Q9NX36 388 aa8.78□□□□□ -1
HPS4-206ENST00000439453 SUPT3HO75486 399 aa8.78□□□□□ -1
HPS4-206ENST00000439453 GSRP00390 522 aa8.78□□□□□ -1
HPS4-206ENST00000439453 APOEP02649 317 aa8.78□□□□□ -1
HPS4-206ENST00000439453 FGF3P11487 239 aaPredicted RBP8.78□□□□□ -1
HPS4-206ENST00000439453 MYL4P12829 197 aa8.78□□□□□ -1
HPS4-206ENST00000439453 CDH2P19022 906 aaPredicted RBP8.78□□□□□ -1
HPS4-206ENST00000439453 RFC1P35251 1148 aaPredicted RBP8.78□□□□□ -1
HPS4-206ENST00000439453 ACOT2P49753 483 aa8.78□□□□□ -1
HPS4-206ENST00000439453 ZNF132P52740 706 aa8.78□□□□□ -1
HPS4-206ENST00000439453 NLRP11P59045 1033 aaKnown RBP8.78□□□□□ -1
HPS4-206ENST00000439453 TLE2Q04725 743 aa8.78□□□□□ -1
HPS4-206ENST00000439453 DGKDQ16760 1214 aa8.78□□□□□ -1
HPS4-206ENST00000439453 KCTD6Q8NC69 237 aa8.78□□□□□ -1
HPS4-206ENST00000439453 CATSPER1Q8NEC5 780 aa8.78□□□□□ -1
HPS4-206ENST00000439453 CDHR1Q96JP9 859 aa8.78□□□□□ -1
HPS4-206ENST00000439453 TOX2Q96NM4 488 aa8.78□□□□□ -1
HPS4-206ENST00000439453 RAB6BQ9NRW1 208 aa8.78□□□□□ -1
HPS4-206ENST00000439453 ARHGAP26Q9UNA1 814 aa8.78□□□□□ -1
HPS4-206ENST00000439453 TMEM221A6NGB7 291 aa8.77□□□□□ -1
HPS4-206ENST00000439453 ZBTB42B2RXF5 422 aa8.77□□□□□ -1
HPS4-206ENST00000439453 CABYRO75952 493 aa8.77□□□□□ -1
HPS4-206ENST00000439453 STBD1O95210 358 aa8.77□□□□□ -1
HPS4-206ENST00000439453 COX4I1P13073 169 aa8.77□□□□□ -1
HPS4-206ENST00000439453 TCF7P36402 384 aaPredicted RBP8.77□□□□□ -1
HPS4-206ENST00000439453 GABRB2P47870 512 aa8.77□□□□□ -1
HPS4-206ENST00000439453 ACTR2P61160 394 aa8.77□□□□□ -1
HPS4-206ENST00000439453 ADGRE1Q14246 886 aa8.77□□□□□ -1
HPS4-206ENST00000439453 ADRM1Q16186 407 aa8.77□□□□□ -1
HPS4-206ENST00000439453 C6orf52Q5T4I8 152 aa8.77□□□□□ -1
HPS4-206ENST00000439453 GDF6Q6KF10 455 aaPredicted RBP8.77□□□□□ -1
HPS4-206ENST00000439453 C16orf46Q6P387 395 aa8.77□□□□□ -1
HPS4-206ENST00000439453 TRAF7Q6Q0C0 670 aa8.77□□□□□ -1
HPS4-206ENST00000439453 NPNTQ6UXI9 565 aa8.77□□□□□ -1
HPS4-206ENST00000439453 PHTF2Q8N3S3 785 aa8.77□□□□□ -1
HPS4-206ENST00000439453 SPC25Q9HBM1 224 aa8.77□□□□□ -1
HPS4-206ENST00000439453 TRMT13Q9NUP7 481 aaKnown RBP8.77□□□□□ -1
HPS4-206ENST00000439453 PADI4Q9UM07 663 aa8.77□□□□□ -1
HPS4-206ENST00000439453 PSEN2P49810 448 aa8.77□□□□□ -1.01
HPS4-206ENST00000439453 CBLBQ13191 982 aa8.77□□□□□ -1.01
HPS4-206ENST00000439453 TRIM71Q2Q1W2 868 aaKnown RBP8.77□□□□□ -1.01
HPS4-206ENST00000439453 TAS1R3Q7RTX0 852 aa8.77□□□□□ -1.01
HPS4-206ENST00000439453 AMIGO2Q86SJ2 522 aa8.77□□□□□ -1.01
HPS4-206ENST00000439453 CCDC60Q8IWA6 550 aaPredicted RBP8.77□□□□□ -1.01
HPS4-206ENST00000439453 WDTC1Q8N5D0 677 aa8.77□□□□□ -1.01
HPS4-206ENST00000439453 GLT1D1Q96MS3 346 aa8.77□□□□□ -1.01
HPS4-206ENST00000439453 HTATIP2Q9BUP3 242 aa8.77□□□□□ -1.01
HPS4-206ENST00000439453 TRPV6Q9H1D0 765 aa8.77□□□□□ -1.01
HPS4-206ENST00000439453 RNPEPQ9H4A4 650 aa8.77□□□□□ -1.01
HPS4-206ENST00000439453 FAM96AQ9H5X1 160 aa8.77□□□□□ -1.01
HPS4-206ENST00000439453 FAIMQ9NVQ4 179 aa8.77□□□□□ -1.01
HPS4-206ENST00000439453 TBCCD1Q9NVR7 557 aa8.77□□□□□ -1.01
HPS4-206ENST00000439453 ARHGEF38Q9NXL2 777 aa8.77□□□□□ -1.01
HPS4-206ENST00000439453 PACSIN3Q9UKS6 424 aa8.77□□□□□ -1.01
HPS4-206ENST00000439453 E9PBE3 544 aa8.77□□□□□ -1.01
HPS4-206ENST00000439453 KCNA4P22459 653 aa8.77□□□□□ -1.01
HPS4-206ENST00000439453 PRDX6P30041 224 aa8.77□□□□□ -1.01
HPS4-206ENST00000439453 LIG4P49917 911 aa8.77□□□□□ -1.01
HPS4-206ENST00000439453 CREB5Q02930 508 aa8.77□□□□□ -1.01
HPS4-206ENST00000439453 MFSD10Q14728 455 aa8.77□□□□□ -1.01
HPS4-206ENST00000439453 MARCH8Q5T0T0 291 aa8.77□□□□□ -1.01
HPS4-206ENST00000439453 VWA5B1Q5TIE3 1220 aa8.77□□□□□ -1.01
HPS4-206ENST00000439453 UNC5AQ6ZN44 842 aa8.77□□□□□ -1.01
HPS4-206ENST00000439453 TICAM1Q8IUC6 712 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms