RNA–Protein interactions for RNA: ENST00000435401.1

LINC00353-201, long intergenic non-protein coding RNA 353, humanhuman

TSL 5 BASIC

Gene LINC00353, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00353-201ENST00000435401 GPC5P78333 572 aa4.39□□□□□ -1.71
LINC00353-201ENST00000435401 RAE1P78406 368 aaKnown RBP4.39□□□□□ -1.71
LINC00353-201ENST00000435401 PDCLQ13371 301 aa4.39□□□□□ -1.71
LINC00353-201ENST00000435401 MTX1Q13505 466 aa4.39□□□□□ -1.71
LINC00353-201ENST00000435401 MFSD13AQ14CX5 517 aa4.39□□□□□ -1.71
LINC00353-201ENST00000435401 PFKFB3Q16875 520 aaPredicted RBP4.39□□□□□ -1.71
LINC00353-201ENST00000435401 FAM110CQ1W6H9 321 aa4.39□□□□□ -1.71
LINC00353-201ENST00000435401 LRRC24Q50LG9 513 aa4.39□□□□□ -1.71
LINC00353-201ENST00000435401 ANKRD40Q6AI12 368 aa4.39□□□□□ -1.71
LINC00353-201ENST00000435401 DLK2Q6UY11 383 aa4.39□□□□□ -1.71
LINC00353-201ENST00000435401 RFX8Q6ZV50 586 aa4.39□□□□□ -1.71
LINC00353-201ENST00000435401 RAB11FIP2Q7L804 512 aa4.39□□□□□ -1.71
LINC00353-201ENST00000435401 SYT13Q7L8C5 426 aa4.39□□□□□ -1.71
LINC00353-201ENST00000435401 ANKRD18AQ8IVF6 992 aa4.39□□□□□ -1.71
LINC00353-201ENST00000435401 MMP21Q8N119 569 aa4.39□□□□□ -1.71
LINC00353-201ENST00000435401 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.39□□□□□ -1.71
LINC00353-201ENST00000435401 PNPLA1Q8N8W4 532 aa4.39□□□□□ -1.71
LINC00353-201ENST00000435401 EDC3Q96F86 508 aaKnown RBP4.39□□□□□ -1.71
LINC00353-201ENST00000435401 ZSCAN31Q96LW9 406 aaPredicted RBP4.39□□□□□ -1.71
LINC00353-201ENST00000435401 EIF2AK1Q9BQI3 630 aaKnown RBP4.39□□□□□ -1.71
LINC00353-201ENST00000435401 PAAF1Q9BRP4 392 aa4.39□□□□□ -1.71
LINC00353-201ENST00000435401 SAYSD1Q9NPB0 183 aa4.39□□□□□ -1.71
LINC00353-201ENST00000435401 C19orf53Q9UNZ5 99 aaPredicted RBP4.39□□□□□ -1.71
LINC00353-201ENST00000435401 RCE1Q9Y256 329 aa4.39□□□□□ -1.71
LINC00353-201ENST00000435401 ZBTB1Q9Y2K1 713 aa4.39□□□□□ -1.71
LINC00353-201ENST00000435401 FAM90A20PA6NIJ5 464 aa4.38□□□□□ -1.71
LINC00353-201ENST00000435401 AGAP5A6NIR3 686 aa4.38□□□□□ -1.71
LINC00353-201ENST00000435401 SLC38A8A6NNN8 435 aa4.38□□□□□ -1.71
LINC00353-201ENST00000435401 POLBP06746 335 aa4.38□□□□□ -1.71
LINC00353-201ENST00000435401 T-ENOLP0DO92 83 aa4.38□□□□□ -1.71
LINC00353-201ENST00000435401 SERPINA4P29622 427 aa4.38□□□□□ -1.71
LINC00353-201ENST00000435401 IGHMBP2P38935 993 aaKnown RBP4.38□□□□□ -1.71
LINC00353-201ENST00000435401 CPA2P48052 419 aa4.38□□□□□ -1.71
LINC00353-201ENST00000435401 DGKQP52824 942 aa4.38□□□□□ -1.71
LINC00353-201ENST00000435401 RPL15P61313 204 aaKnown RBP4.38□□□□□ -1.71
LINC00353-201ENST00000435401 RNASELQ05823 741 aaKnown RBP4.38□□□□□ -1.71
LINC00353-201ENST00000435401 SLC14A1Q13336 389 aa4.38□□□□□ -1.71
LINC00353-201ENST00000435401 GAB1Q13480 694 aa4.38□□□□□ -1.71
LINC00353-201ENST00000435401 AAK1Q2M2I8 961 aa4.38□□□□□ -1.71
LINC00353-201ENST00000435401 UBAP2Q5T6F2 1119 aaKnown RBP4.38□□□□□ -1.71
LINC00353-201ENST00000435401 SYNE3Q6ZMZ3 975 aa4.38□□□□□ -1.71
LINC00353-201ENST00000435401 C2CD5Q86YS7 1000 aa4.38□□□□□ -1.71
LINC00353-201ENST00000435401 CPOQ8IVL8 374 aa4.38□□□□□ -1.71
LINC00353-201ENST00000435401 OR6Y1Q8NGX8 325 aa4.38□□□□□ -1.71
LINC00353-201ENST00000435401 SPPL3Q8TCT6 385 aa4.38□□□□□ -1.71
LINC00353-201ENST00000435401 OVCA2Q8WZ82 227 aa4.38□□□□□ -1.71
LINC00353-201ENST00000435401 GOLGA1Q92805 767 aa4.38□□□□□ -1.71
LINC00353-201ENST00000435401 KAZALD1Q96I82 304 aa4.38□□□□□ -1.71
LINC00353-201ENST00000435401 REXO5Q96IC2 774 aaKnown RBP4.38□□□□□ -1.71
LINC00353-201ENST00000435401 HIC2Q96JB3 615 aa4.38□□□□□ -1.71
LINC00353-201ENST00000435401 ELOVL1Q9BW60 279 aa4.38□□□□□ -1.71
LINC00353-201ENST00000435401 VPS33BQ9H267 617 aa4.38□□□□□ -1.71
LINC00353-201ENST00000435401 ABHD16BQ9H3Z7 469 aa4.38□□□□□ -1.71
LINC00353-201ENST00000435401 RMI1Q9H9A7 625 aa4.38□□□□□ -1.71
LINC00353-201ENST00000435401 CHODLQ9H9P2 273 aa4.38□□□□□ -1.71
LINC00353-201ENST00000435401 FBXO28Q9NVF7 368 aa4.38□□□□□ -1.71
LINC00353-201ENST00000435401 TRPC5Q9UL62 973 aaPredicted RBP4.38□□□□□ -1.71
LINC00353-201ENST00000435401 GTF2A1LQ9UNN4 478 aa4.38□□□□□ -1.71
LINC00353-201ENST00000435401 SLC12A4Q9UP95 1085 aa4.38□□□□□ -1.71
LINC00353-201ENST00000435401 PCDHA10Q9Y5I2 948 aa4.38□□□□□ -1.71
LINC00353-201ENST00000435401 RRN3P2A6NIE6 340 aa4.37□□□□□ -1.71
LINC00353-201ENST00000435401 FYB1O15117 783 aa4.37□□□□□ -1.71
LINC00353-201ENST00000435401 HEXIM1O94992 359 aaKnown RBP4.37□□□□□ -1.71
LINC00353-201ENST00000435401 KAT7O95251 611 aa4.37□□□□□ -1.71
LINC00353-201ENST00000435401 AARSP49588 968 aaKnown RBP eCLIP4.37□□□□□ -1.71
LINC00353-201ENST00000435401 YPEL5P62699 121 aa4.37□□□□□ -1.71
LINC00353-201ENST00000435401 TXNL4AP83876 142 aaKnown RBP4.37□□□□□ -1.71
LINC00353-201ENST00000435401 CCDC15Q0P6D6 951 aa4.37□□□□□ -1.71
LINC00353-201ENST00000435401 EARS2Q5JPH6 523 aaKnown RBP4.37□□□□□ -1.71
LINC00353-201ENST00000435401 ZNF569Q5MCW4 686 aa4.37□□□□□ -1.71
LINC00353-201ENST00000435401 FBXO47Q5MNV8 452 aa4.37□□□□□ -1.71
LINC00353-201ENST00000435401 ANKRD45Q5TZF3 282 aa4.37□□□□□ -1.71
LINC00353-201ENST00000435401 ACSM6Q6P461 480 aa4.37□□□□□ -1.71
LINC00353-201ENST00000435401 ZNF549Q6P9A3 640 aa4.37□□□□□ -1.71
LINC00353-201ENST00000435401 KIAA1324Q6UXG2 1013 aaKnown RBP4.37□□□□□ -1.71
LINC00353-201ENST00000435401 KYAT3Q6YP21 454 aaKnown RBP4.37□□□□□ -1.71
LINC00353-201ENST00000435401 FAM71DQ8N9W8 422 aa4.37□□□□□ -1.71
LINC00353-201ENST00000435401 CLEC4CQ8WTT0 213 aa4.37□□□□□ -1.71
LINC00353-201ENST00000435401 ASB12Q8WXK4 309 aa4.37□□□□□ -1.71
LINC00353-201ENST00000435401 THAP4Q8WY91 577 aa4.37□□□□□ -1.71
LINC00353-201ENST00000435401 TRMT61AQ96FX7 289 aaKnown RBP4.37□□□□□ -1.71
LINC00353-201ENST00000435401 COG8Q96MW5 612 aa4.37□□□□□ -1.71
LINC00353-201ENST00000435401 ARHGAP39Q9C0H5 1083 aa4.37□□□□□ -1.71
LINC00353-201ENST00000435401 KCNK9Q9NPC2 374 aa4.37□□□□□ -1.71
LINC00353-201ENST00000435401 RIC8AQ9NPQ8 531 aa4.37□□□□□ -1.71
LINC00353-201ENST00000435401 FZD4Q9ULV1 537 aa4.37□□□□□ -1.71
LINC00353-201ENST00000435401 IGLV5-39A0A0G2JS06 123 aa4.36□□□□□ -1.71
LINC00353-201ENST00000435401 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.36□□□□□ -1.71
LINC00353-201ENST00000435401 C16orf96A6NNT2 1141 aa4.36□□□□□ -1.71
LINC00353-201ENST00000435401 EYA2O00167 538 aa4.36□□□□□ -1.71
LINC00353-201ENST00000435401 NCAM2O15394 837 aa4.36□□□□□ -1.71
LINC00353-201ENST00000435401 NKX2-8O15522 239 aa4.36□□□□□ -1.71
LINC00353-201ENST00000435401 JAK3P52333 1124 aa4.36□□□□□ -1.71
LINC00353-201ENST00000435401 FOXL2P58012 376 aa4.36□□□□□ -1.71
LINC00353-201ENST00000435401 B4GALNT1Q00973 533 aa4.36□□□□□ -1.71
LINC00353-201ENST00000435401 SMAD1Q15797 465 aaKnown RBP4.36□□□□□ -1.71
LINC00353-201ENST00000435401 TAF12Q16514 161 aa4.36□□□□□ -1.71
LINC00353-201ENST00000435401 ADCK5Q3MIX3 580 aa4.36□□□□□ -1.71
LINC00353-201ENST00000435401 MANEAQ5SRI9 462 aa4.36□□□□□ -1.71
LINC00353-201ENST00000435401 BCAS4Q8TDM0 211 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms