RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 C10orf53Q8N6V4 93 aa13.21□□□□□ -0.29
RNF43-201ENST00000407977 ASZ1Q8WWH4 475 aa13.21□□□□□ -0.29
RNF43-201ENST00000407977 SLITRK2Q9H156 845 aa13.21□□□□□ -0.29
RNF43-201ENST00000407977 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.21□□□□□ -0.29
RNF43-201ENST00000407977 ADCY6O43306 1168 aa13.21□□□□□ -0.29
RNF43-201ENST00000407977 S100A9P06702 114 aaKnown RBP13.21□□□□□ -0.29
RNF43-201ENST00000407977 STAG3L1P0CL83 205 aa13.21□□□□□ -0.29
RNF43-201ENST00000407977 TAF5Q15542 800 aa13.21□□□□□ -0.29
RNF43-201ENST00000407977 RFX4Q33E94 735 aa13.21□□□□□ -0.29
RNF43-201ENST00000407977 RNF148Q8N7C7 305 aa13.21□□□□□ -0.29
RNF43-201ENST00000407977 GMCL1P1Q8NEA9 526 aa13.21□□□□□ -0.29
RNF43-201ENST00000407977 METTL6Q8TCB7 284 aa13.21□□□□□ -0.29
RNF43-201ENST00000407977 ART4Q93070 314 aa13.21□□□□□ -0.29
RNF43-201ENST00000407977 BORCS5Q969J3 196 aa13.21□□□□□ -0.29
RNF43-201ENST00000407977 TNPO3Q9Y5L0 923 aaKnown RBP13.21□□□□□ -0.29
RNF43-201ENST00000407977 CEMIPQ8WUJ3 1361 aa13.21□□□□□ -0.29
RNF43-201ENST00000407977 BCLAF3A2AJT9 711 aaKnown RBP13.21□□□□□ -0.29
RNF43-201ENST00000407977 TNFRSF21O75509 655 aa13.21□□□□□ -0.29
RNF43-201ENST00000407977 ALDH1A2O94788 518 aa13.21□□□□□ -0.29
RNF43-201ENST00000407977 COX4I1P13073 169 aa13.21□□□□□ -0.29
RNF43-201ENST00000407977 TTC30AQ86WT1 665 aa13.21□□□□□ -0.29
RNF43-201ENST00000407977 CCNB1IP1Q9NPC3 277 aa13.21□□□□□ -0.29
RNF43-201ENST00000407977 SPAG4Q9NPE6 437 aa13.21□□□□□ -0.29
RNF43-201ENST00000407977 TIMMDC1Q9NPL8 285 aa13.21□□□□□ -0.29
RNF43-201ENST00000407977 MTF2Q9Y483 593 aaPredicted RBP13.21□□□□□ -0.29
RNF43-201ENST00000407977 STON1Q9Y6Q2 735 aa13.21□□□□□ -0.29
RNF43-201ENST00000407977 LCA5LO95447 670 aa13.21□□□□□ -0.3
RNF43-201ENST00000407977 FYNP06241 537 aa13.21□□□□□ -0.3
RNF43-201ENST00000407977 CSE1LP55060 971 aaKnown RBP13.21□□□□□ -0.3
RNF43-201ENST00000407977 PTAR1Q7Z6K3 402 aaPredicted RBP13.21□□□□□ -0.3
RNF43-201ENST00000407977 ZSCAN18Q8TBC5 510 aaPredicted RBP13.21□□□□□ -0.3
RNF43-201ENST00000407977 WDR12Q9GZL7 423 aaKnown RBP13.21□□□□□ -0.3
RNF43-201ENST00000407977 CHKBQ9Y259 395 aa13.21□□□□□ -0.3
RNF43-201ENST00000407977 FAM205AQ6ZU69 1335 aa13.21□□□□□ -0.3
RNF43-201ENST00000407977 PDE2AO00408 941 aaPredicted RBP13.2□□□□□ -0.3
RNF43-201ENST00000407977 FLT3P36888 993 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 FEN1P39748 380 aaKnown RBP13.2□□□□□ -0.3
RNF43-201ENST00000407977 FAM182BQ5T319 152 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 CACTIN-AS1Q8N1I8 211 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 MYDGFQ969H8 173 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 DGCR6LQ9BY27 220 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 NCANO14594 1321 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 CNPP09543 421 aaKnown RBP13.2□□□□□ -0.3
RNF43-201ENST00000407977 ZNF7P17097 686 aaPredicted RBP13.2□□□□□ -0.3
RNF43-201ENST00000407977 CYP2A7P20853 494 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 ZNF467Q7Z7K2 595 aaPredicted RBP13.2□□□□□ -0.3
RNF43-201ENST00000407977 REPS1Q96D71 796 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 POP1Q99575 1024 aaKnown RBP13.2□□□□□ -0.3
RNF43-201ENST00000407977 CLK4Q9HAZ1 481 aaKnown RBP13.2□□□□□ -0.3
RNF43-201ENST00000407977 CHST7Q9NS84 486 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 CLIC5Q9NZA1 410 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 EHD3Q9NZN3 535 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 ARIH1Q9Y4X5 557 aaPredicted RBP13.2□□□□□ -0.3
RNF43-201ENST00000407977 ZMYM2Q9UBW7 1377 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 H7C4K7 107 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 IDH3BO43837 385 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 KRT36O76013 467 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 SNRPB2P08579 225 aaKnown RBP13.2□□□□□ -0.3
RNF43-201ENST00000407977 S100A3P33764 101 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 NRF1Q16656 503 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 INTS11Q5TA45 600 aaKnown RBP13.2□□□□□ -0.3
RNF43-201ENST00000407977 ZNF470Q6ECI4 717 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 NT5DC4Q86YG4 428 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 RDH11Q8TC12 318 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 CAPSLQ8WWF8 208 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 PLEKHG4BQ96PX9 1271 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 TSEN34Q9BSV6 310 aaKnown RBP13.2□□□□□ -0.3
RNF43-201ENST00000407977 CHID1Q9BWS9 393 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 SEMA6AQ9H2E6 1030 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 PIF1Q9H611 641 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 NT5MQ9NPB1 228 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 RWDD3Q9Y3V2 267 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 UBE2Q2LH0YL09 131 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 CYB561D2O14569 222 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 ENTPD5O75356 428 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 ARP10275 920 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 IRF1P10914 325 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 DARSP14868 501 aaKnown RBP13.2□□□□□ -0.3
RNF43-201ENST00000407977 CDH3P22223 829 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 GUCA1AP43080 201 aaPredicted RBP13.2□□□□□ -0.3
RNF43-201ENST00000407977 PKNOX1P55347 436 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 POU6F1Q14863 301 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 DUPD1Q68J44 220 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 FOXR2Q6PJQ5 311 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 C11orf96Q7Z7L8 435 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 TTC7BQ86TV6 843 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 CDK5RAP1Q96SZ6 601 aaKnown RBP13.2□□□□□ -0.3
RNF43-201ENST00000407977 POMKQ9H5K3 350 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 ABI2Q9NYB9 513 aaPredicted RBP13.2□□□□□ -0.3
RNF43-201ENST00000407977 TRPM5Q9NZQ8 1165 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 ABT1Q9ULW3 272 aaKnown RBP13.2□□□□□ -0.3
RNF43-201ENST00000407977 BMP10O95393 424 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 VCLP18206 1134 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 RXRBP28702 533 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 CCR1P32246 355 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 CDC42P60953 191 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 PRKCQQ04759 706 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 PDIA6Q15084 440 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 PNMA5Q96PV4 448 aa13.2□□□□□ -0.3
RNF43-201ENST00000407977 POLR1BQ9H9Y6 1135 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms