RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 HMGB1P1B2RPK0 211 aaPredicted RBP13.87□□□□□ -0.19
CCDC197-201ENST00000359253 E7ESA3 106 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 E9PAM4 449 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 TEX28O15482 410 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 TCEA3O75764 348 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 CXCL14O95715 111 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 IVLP07476 585 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 RHOQP17081 205 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 CCNCP24863 283 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 MAGEA4P43358 317 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 PGFP49763 221 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 BASP1P80723 227 aaKnown RBP13.87□□□□□ -0.19
CCDC197-201ENST00000359253 SLC29A2Q14542 456 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 KCNJ11Q14654 390 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 PARP6Q2NL67 630 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 TUBB8Q3ZCM7 444 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 CEP85LQ5SZL2 805 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 AGBL2Q5U5Z8 902 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 TIGD7Q6NT04 549 aaPredicted RBP13.87□□□□□ -0.19
CCDC197-201ENST00000359253 MRPL43Q8N983 215 aaKnown RBP13.87□□□□□ -0.19
CCDC197-201ENST00000359253 CCNYQ8ND76 341 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 GPR152Q8TDT2 470 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 MICAL1Q8TDZ2 1067 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 GDPD5Q8WTR4 605 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 LRRC39Q96DD0 335 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 CDCA3Q99618 268 aaPredicted RBP13.87□□□□□ -0.19
CCDC197-201ENST00000359253 DDX50Q9BQ39 737 aaKnown RBP13.87□□□□□ -0.19
CCDC197-201ENST00000359253 ZYG11BQ9C0D3 744 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 SIK2Q9H0K1 926 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 STMN4Q9H169 189 aaPredicted RBP13.87□□□□□ -0.19
CCDC197-201ENST00000359253 NSUN3Q9H649 340 aaKnown RBP13.87□□□□□ -0.19
CCDC197-201ENST00000359253 EIF2B3Q9NR50 452 aaKnown RBP13.87□□□□□ -0.19
CCDC197-201ENST00000359253 RAB6BQ9NRW1 208 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 IGSF9Q9P2J2 1179 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 INSL5Q9Y5Q6 135 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 HS3ST4Q9Y661 456 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 GREB1Q4ZG55 1949 aa13.87□□□□□ -0.19
CCDC197-201ENST00000359253 CHD7Q9P2D1 2997 aa13.86□□□□□ -0.19
CCDC197-201ENST00000359253 DRGXA6NNA5 263 aa13.86□□□□□ -0.19
CCDC197-201ENST00000359253 ERI2A8K979 691 aaKnown RBP13.86□□□□□ -0.19
CCDC197-201ENST00000359253 AP3B1O00203 1094 aa13.86□□□□□ -0.19
CCDC197-201ENST00000359253 PSMD3O43242 534 aa13.86□□□□□ -0.19
CCDC197-201ENST00000359253 MSI1O43347 362 aaKnown RBP13.86□□□□□ -0.19
CCDC197-201ENST00000359253 RNF40O75150 1001 aa13.86□□□□□ -0.19
CCDC197-201ENST00000359253 SPAG6O75602 509 aa13.86□□□□□ -0.19
CCDC197-201ENST00000359253 FGF19O95750 216 aa13.86□□□□□ -0.19
CCDC197-201ENST00000359253 LATS1O95835 1130 aa13.86□□□□□ -0.19
CCDC197-201ENST00000359253 SRGAP2BP0DMP2 458 aa13.86□□□□□ -0.19
CCDC197-201ENST00000359253 MLNP12872 115 aa13.86□□□□□ -0.19
CCDC197-201ENST00000359253 DNAJB1P25685 340 aa13.86□□□□□ -0.19
CCDC197-201ENST00000359253 PHBP35232 272 aa13.86□□□□□ -0.19
CCDC197-201ENST00000359253 CHKAP35790 457 aa13.86□□□□□ -0.19
CCDC197-201ENST00000359253 GARSP41250 739 aaKnown RBP13.86□□□□□ -0.19
CCDC197-201ENST00000359253 SLC11A2P49281 568 aa13.86□□□□□ -0.19
CCDC197-201ENST00000359253 HARS2P49590 506 aaKnown RBP13.86□□□□□ -0.19
CCDC197-201ENST00000359253 NDST2P52849 883 aa13.86□□□□□ -0.19
CCDC197-201ENST00000359253 AP1B1Q10567 949 aa13.86□□□□□ -0.19
CCDC197-201ENST00000359253 SEMA5AQ13591 1074 aa13.86□□□□□ -0.19
CCDC197-201ENST00000359253 STAT4Q14765 748 aa13.86□□□□□ -0.19
CCDC197-201ENST00000359253 ANKRD20A2Q5SQ80 823 aa13.86□□□□□ -0.19
CCDC197-201ENST00000359253 ANKRD20A1Q5TYW2 823 aa13.86□□□□□ -0.19
CCDC197-201ENST00000359253 ANKRD20A3Q5VUR7 823 aa13.86□□□□□ -0.19
CCDC197-201ENST00000359253 ITPRIPL1Q6GPH6 555 aa13.86□□□□□ -0.19
CCDC197-201ENST00000359253 RWDD4Q6NW29 188 aaKnown RBP13.86□□□□□ -0.19
CCDC197-201ENST00000359253 LILRA6Q6PI73 481 aa13.86□□□□□ -0.19
CCDC197-201ENST00000359253 TMC7Q7Z402 723 aa13.86□□□□□ -0.19
CCDC197-201ENST00000359253 DNAJB7Q7Z6W7 309 aaPredicted RBP13.86□□□□□ -0.19
CCDC197-201ENST00000359253 PRUNE1Q86TP1 453 aa13.86□□□□□ -0.19
CCDC197-201ENST00000359253 RTL3Q8N8U3 475 aaKnown RBP13.86□□□□□ -0.19
CCDC197-201ENST00000359253 P2RY11Q96G91 374 aa13.86□□□□□ -0.19
CCDC197-201ENST00000359253 NACA2Q9H009 215 aa13.86□□□□□ -0.19
CCDC197-201ENST00000359253 EPB41L4BQ9H329 900 aa13.86□□□□□ -0.19
CCDC197-201ENST00000359253 TMBIM4Q9HC24 238 aa13.86□□□□□ -0.19
CCDC197-201ENST00000359253 XPO7Q9UIA9 1087 aaKnown RBP13.86□□□□□ -0.19
CCDC197-201ENST00000359253 A0A087WUV0 522 aaPredicted RBP13.85□□□□□ -0.19
CCDC197-201ENST00000359253 GOLGA6CA6NDK9 693 aa13.85□□□□□ -0.19
CCDC197-201ENST00000359253 SOBPA7XYQ1 873 aa13.85□□□□□ -0.19
CCDC197-201ENST00000359253 H3BQF6 201 aa13.85□□□□□ -0.19
CCDC197-201ENST00000359253 GSTA2P09210 222 aa13.85□□□□□ -0.19
CCDC197-201ENST00000359253 CNPP09543 421 aaKnown RBP13.85□□□□□ -0.19
CCDC197-201ENST00000359253 GOLGA6DP0CG33 693 aa13.85□□□□□ -0.19
CCDC197-201ENST00000359253 ERVFC1P60507 584 aa13.85□□□□□ -0.19
CCDC197-201ENST00000359253 ZNF844Q08AG5 666 aa13.85□□□□□ -0.19
CCDC197-201ENST00000359253 TWF1Q12792 350 aa13.85□□□□□ -0.19
CCDC197-201ENST00000359253 AUHQ13825 339 aaKnown RBP13.85□□□□□ -0.19
CCDC197-201ENST00000359253 C5orf22Q49AR2 442 aa13.85□□□□□ -0.19
CCDC197-201ENST00000359253 DNAJC21Q5F1R6 531 aaKnown RBP13.85□□□□□ -0.19
CCDC197-201ENST00000359253 MS4A13Q5J8X5 152 aa13.85□□□□□ -0.19
CCDC197-201ENST00000359253 AFMIDQ63HM1 303 aa13.85□□□□□ -0.19
CCDC197-201ENST00000359253 CCDC13Q8IYE1 715 aa13.85□□□□□ -0.19
CCDC197-201ENST00000359253 ZNF683Q8IZ20 524 aa13.85□□□□□ -0.19
CCDC197-201ENST00000359253 UMODL1-AS1Q8N2C9 162 aa13.85□□□□□ -0.19
CCDC197-201ENST00000359253 ELMOD1Q8N336 334 aa13.85□□□□□ -0.19
CCDC197-201ENST00000359253 PGM2Q96G03 612 aa13.85□□□□□ -0.19
CCDC197-201ENST00000359253 ATP6V1G3Q96LB4 118 aa13.85□□□□□ -0.19
CCDC197-201ENST00000359253 SERPINB12Q96P63 405 aa13.85□□□□□ -0.19
CCDC197-201ENST00000359253 KLHL5Q96PQ7 755 aa13.85□□□□□ -0.19
CCDC197-201ENST00000359253 LGMNQ99538 433 aa13.85□□□□□ -0.19
CCDC197-201ENST00000359253 C10orf88Q9H8K7 445 aa13.85□□□□□ -0.19
CCDC197-201ENST00000359253 XAB2Q9HCS7 855 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms