RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 MIOSQ9NXC5 875 aa22.81■■□□□ 1.24
NKX2-1-201ENST00000354822 TIMM13Q9Y5L4 95 aaPredicted RBP22.81■■□□□ 1.24
NKX2-1-201ENST00000354822 AP3B1O00203 1094 aa22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 GPR182O15218 404 aa22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 PEX11AO75192 247 aa22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 CRHR2Q13324 411 aa22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 N4BP2L1Q5TBK1 243 aaPredicted RBP22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 GPRIN1Q7Z2K8 1008 aa22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 MRPL10Q7Z7H8 261 aaKnown RBP22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 ENDOVQ8N8Q3 282 aaKnown RBP22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 TRIM62Q9BVG3 475 aa22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 CASS4Q9NQ75 786 aa22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 PIH1D1Q9NWS0 290 aaKnown RBP22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 VANGL2Q9ULK5 521 aa22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 HBS1LQ9Y450 684 aaKnown RBP22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 CCDC195A0A1B0GUA6 201 aa22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 PLIN3O60664 434 aa22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 PAX3P23760 479 aa22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 GALNT2Q10471 571 aa22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 GNASQ5JWF2 1037 aa22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 PM20D1Q6GTS8 502 aa22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 C4orf50Q6ZRC1 276 aa22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 TMEM135Q86UB9 458 aa22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 WDR75Q8IWA0 830 aaKnown RBP22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 SCML4Q8N228 414 aa22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 OR52K1Q8NGK4 314 aa22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 NUDCD1Q96RS6 583 aa22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 NMUR2Q9GZQ4 415 aa22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 SENP6Q9GZR1 1112 aaPredicted RBP22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 GBA3Q9H227 469 aa22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 DENND2DQ9H6A0 471 aaPredicted RBP22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 ANLNQ9NQW6 1124 aa22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 SORCS3Q9UPU3 1222 aa22.8■■□□□ 1.24
NKX2-1-201ENST00000354822 DIAPH2O60879 1101 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 USP1O94782 785 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 GSRP00390 522 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 ODC1P11926 461 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 IBSPP21815 317 aaPredicted RBP22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 TYK2P29597 1187 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 NPY2RP49146 381 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 AQP5P55064 265 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 SREBF2Q12772 1141 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 UPP1Q16831 310 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 CES4AQ5XG92 561 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 METTL23Q86XA0 190 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 TP53INP2Q8IXH6 220 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 ARHGAP24Q8N264 748 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 TRPV1Q8NER1 839 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 ACBD6Q9BR61 282 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 STN1Q9H668 368 aaKnown RBP22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 CACNG4Q9UBN1 327 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 OR12D3Q9UGF7 316 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 C2orf71A6NGG8 1288 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 GRK2P25098 689 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 CTGFP29279 349 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 SPRP35270 261 aaPredicted RBP22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 ZNF33AQ06730 810 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 MBLAC2Q68D91 279 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 KCTD11Q693B1 232 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 DCLRE1AQ6PJP8 1040 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 ALYREFQ86V81 257 aaKnown RBP22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 DNAAF3Q8N9W5 541 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 C3orf58Q8NDZ4 430 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 MCUR1Q96AQ8 359 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 TKTL2Q9H0I9 626 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 FAM96AQ9H5X1 160 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 DCLRE1BQ9H816 532 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 TAS2R1Q9NYW7 299 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 EMCNQ9ULC0 261 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 PSAT1Q9Y617 370 aa22.79■■□□□ 1.24
NKX2-1-201ENST00000354822 MYADML2A6NDP7 307 aa22.78■■□□□ 1.24
NKX2-1-201ENST00000354822 CAPN14A8MX76 684 aa22.78■■□□□ 1.24
NKX2-1-201ENST00000354822 I6L893 689 aaPredicted RBP22.78■■□□□ 1.24
NKX2-1-201ENST00000354822 ZBTB24O43167 697 aaPredicted RBP22.78■■□□□ 1.24
NKX2-1-201ENST00000354822 ERVK-10P10266 1014 aa22.78■■□□□ 1.24
NKX2-1-201ENST00000354822 DNAJB2P25686 324 aa22.78■■□□□ 1.24
NKX2-1-201ENST00000354822 CACNA2D1P54289 1103 aa22.78■■□□□ 1.24
NKX2-1-201ENST00000354822 HSF5Q4G112 596 aaPredicted RBP22.78■■□□□ 1.24
NKX2-1-201ENST00000354822 AGMOQ6ZNB7 445 aa22.78■■□□□ 1.24
NKX2-1-201ENST00000354822 LPPQ93052 612 aa22.78■■□□□ 1.24
NKX2-1-201ENST00000354822 ISL2Q96A47 359 aa22.78■■□□□ 1.24
NKX2-1-201ENST00000354822 AGAP3Q96P47 875 aa22.78■■□□□ 1.24
NKX2-1-201ENST00000354822 PPARGC1AQ9UBK2 798 aaKnown RBP22.78■■□□□ 1.24
NKX2-1-201ENST00000354822 PSMD3O43242 534 aa22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 CHRNA1P02708 482 aa22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 TPBGLP0DKB5 382 aa22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 CYP2C18P33260 490 aa22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 SCNN1GP51170 649 aa22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 AFF1P51825 1210 aaKnown RBP22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 COG7P83436 770 aa22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 CCDC153Q494R4 210 aa22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 TIGD5Q53EQ6 642 aa22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 FAM171BQ6P995 826 aa22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 BEND5Q7L4P6 421 aa22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 BHLHA9Q7RTU4 235 aa22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 TTC7BQ86TV6 843 aa22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 PIWIL2Q8TC59 973 aaKnown RBP22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 PRR11Q96HE9 360 aaPredicted RBP22.77■■□□□ 1.24
NKX2-1-201ENST00000354822 GORASP1Q9BQQ3 440 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms