RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 RFX8Q6ZV50 586 aa14.49□□□□□ -0.09
APOBEC3B-202ENST00000335760 MAP7D3Q8IWC1 876 aa14.49□□□□□ -0.09
APOBEC3B-202ENST00000335760 TRIM58Q8NG06 486 aa14.49□□□□□ -0.09
APOBEC3B-202ENST00000335760 FIBINQ8TAL6 211 aa14.49□□□□□ -0.09
APOBEC3B-202ENST00000335760 FAM71BQ8TC56 605 aa14.49□□□□□ -0.09
APOBEC3B-202ENST00000335760 TSC1Q92574 1164 aa14.49□□□□□ -0.09
APOBEC3B-202ENST00000335760 EXOC4Q96A65 974 aa14.49□□□□□ -0.09
APOBEC3B-202ENST00000335760 SHDQ96IW2 340 aa14.49□□□□□ -0.09
APOBEC3B-202ENST00000335760 PNKPQ96T60 521 aa14.49□□□□□ -0.09
APOBEC3B-202ENST00000335760 P2RY13Q9BPV8 354 aa14.49□□□□□ -0.09
APOBEC3B-202ENST00000335760 CALN1Q9BXU9 219 aa14.49□□□□□ -0.09
APOBEC3B-202ENST00000335760 CATSPERBQ9H7T0 1116 aa14.49□□□□□ -0.09
APOBEC3B-202ENST00000335760 FBRSL1Q9HCM7 1045 aaKnown RBP14.49□□□□□ -0.09
APOBEC3B-202ENST00000335760 ARHGEF4Q9NR80 690 aa14.49□□□□□ -0.09
APOBEC3B-202ENST00000335760 PACSIN2Q9UNF0 486 aaPredicted RBP14.49□□□□□ -0.09
APOBEC3B-202ENST00000335760 CCDC66A2RUB6 948 aa14.48□□□□□ -0.09
APOBEC3B-202ENST00000335760 SHISA7A6NL88 538 aa14.48□□□□□ -0.09
APOBEC3B-202ENST00000335760 MIF4GDA9UHW6 222 aaKnown RBP14.48□□□□□ -0.09
APOBEC3B-202ENST00000335760 FGF10O15520 208 aaPredicted RBP14.48□□□□□ -0.09
APOBEC3B-202ENST00000335760 ALADP13716 330 aa14.48□□□□□ -0.09
APOBEC3B-202ENST00000335760 OR1E1P30953 314 aa14.48□□□□□ -0.09
APOBEC3B-202ENST00000335760 MMRN1Q13201 1228 aa14.48□□□□□ -0.09
APOBEC3B-202ENST00000335760 FSCBQ5H9T9 825 aa14.48□□□□□ -0.09
APOBEC3B-202ENST00000335760 C1orf228Q6PIY5 440 aa14.48□□□□□ -0.09
APOBEC3B-202ENST00000335760 NLRP14Q86W24 1093 aa14.48□□□□□ -0.09
APOBEC3B-202ENST00000335760 KATNAL2Q8IYT4 538 aa14.48□□□□□ -0.09
APOBEC3B-202ENST00000335760 C17orf53Q8N3J3 647 aaPredicted RBP14.48□□□□□ -0.09
APOBEC3B-202ENST00000335760 UBL4BQ8N7F7 174 aa14.48□□□□□ -0.09
APOBEC3B-202ENST00000335760 ZNF557Q8N988 423 aaPredicted RBP14.48□□□□□ -0.09
APOBEC3B-202ENST00000335760 RNF25Q96BH1 459 aaPredicted RBP14.48□□□□□ -0.09
APOBEC3B-202ENST00000335760 CSPG4P5Q96PW8 444 aa14.48□□□□□ -0.09
APOBEC3B-202ENST00000335760 RETREG1Q9H6L5 497 aa14.48□□□□□ -0.09
APOBEC3B-202ENST00000335760 TMEM248Q9NWD8 314 aa14.48□□□□□ -0.09
APOBEC3B-202ENST00000335760 RCOR3Q9P2K3 495 aaPredicted RBP14.48□□□□□ -0.09
APOBEC3B-202ENST00000335760 DNAI1Q9UI46 699 aa14.48□□□□□ -0.09
APOBEC3B-202ENST00000335760 DOCK4Q8N1I0 1966 aa14.48□□□□□ -0.09
APOBEC3B-202ENST00000335760 KIAA1549LQ6ZVL6 1849 aa14.48□□□□□ -0.09
APOBEC3B-202ENST00000335760 C3orf70A6NLC5 250 aaPredicted RBP14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 WASH4PA8MWX3 477 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 DDX3YO15523 660 aaKnown RBP14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 KIF5CO60282 957 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 KAT7O95251 611 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 APODP05090 189 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 RHOCP08134 193 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 ERCC2P18074 760 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 AMPD1P23109 780 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 IL4RP24394 825 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 HLA-FP30511 346 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 CD70P32970 193 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 MAPKAPK2P49137 400 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 PEX5P50542 639 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 DNA2P51530 1060 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 RWDD2BP57060 319 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 STARD6P59095 220 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 MESP2Q0VG99 397 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 GRSF1Q12849 480 aaKnown RBP eCLIP14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 LMAN2Q12907 356 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 DPYSQ14117 519 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 PREPLQ4J6C6 727 aaPredicted RBP14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 ZNF569Q5MCW4 686 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 MEI1Q5TIA1 1274 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 CXorf57Q6NSI4 855 aaKnown RBP14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 PHTF2Q8N3S3 785 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 RTL3Q8N8U3 475 aaKnown RBP14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 HES6Q96HZ4 224 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 LMLNQ96KR4 655 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 ZNF670Q9BS34 389 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 KCND1Q9NSA2 647 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 ABCB8Q9NUT2 735 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 NDFIP2Q9NV92 336 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 KIAA1522Q9P206 1035 aaPredicted RBP14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 ZNF212Q9UDV6 495 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 NDRG2Q9UN36 371 aaKnown RBP14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 TBC1D30Q9Y2I9 924 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 SLC27A6Q9Y2P4 619 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 KANSL1LA0AUZ9 987 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 TBC1D3BA6NDS4 549 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 STK25O00506 426 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 ZRANB2O95218 330 aaKnown RBP eCLIP14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 PABPC1P11940 636 aaKnown RBP14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 CSKP41240 450 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 GRIA2P42262 883 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 OXCT1P55809 520 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 RPS6KA1Q15418 735 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 GEN1Q17RS7 908 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 ANKRD20A8PQ5CZ79 823 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 TMEM196Q5HYL7 178 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 C6orf118Q5T5N4 469 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 RNF219Q5W0B1 726 aaPredicted RBP14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 FSTL4Q6MZW2 842 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 MFSD7Q6UXD7 560 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 SPOCD1Q6ZMY3 1216 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 TRIM67Q6ZTA4 783 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 ANKS1BQ7Z6G8 1248 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 SETD3Q86TU7 594 aaPredicted RBP14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 CCDC50Q8IVM0 306 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 SUGP1Q8IWZ8 645 aaKnown RBP14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 RCOR2Q8IZ40 523 aa14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.47□□□□□ -0.09
APOBEC3B-202ENST00000335760 TERB1Q8NA31 727 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms