RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 SEMA6AQ9H2E6 1030 aa14.06□□□□□ -0.16
SYNE3-201ENST00000334258 RSL24D1Q9UHA3 163 aaKnown RBP14.06□□□□□ -0.16
SYNE3-201ENST00000334258 PIK3R1P27986 724 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 TMEM132BQ14DG7 1078 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 DUS1LQ6P1R4 473 aaKnown RBP14.05□□□□□ -0.16
SYNE3-201ENST00000334258 ZFP1Q6P2D0 407 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 NANOGNBQ7Z5D8 188 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 PTAR1Q7Z6K3 402 aaPredicted RBP14.05□□□□□ -0.16
SYNE3-201ENST00000334258 C14orf80Q86SX3 495 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 MCUQ8NE86 351 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 PCDH19Q8TAB3 1148 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 RCN3Q96D15 328 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 DHRS1Q96LJ7 313 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 SLC38A10Q9HBR0 1119 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 PLK2Q9NYY3 685 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 CLEC11AQ9Y240 323 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 STX16-NPEPL1H3BU86 382 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 WDR46O15213 610 aaKnown RBP14.05□□□□□ -0.16
SYNE3-201ENST00000334258 FAM189A1O60320 539 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 MICAL2O94851 1124 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 AMHP03971 560 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 RPS12P25398 132 aaKnown RBP14.05□□□□□ -0.16
SYNE3-201ENST00000334258 ASPAP45381 313 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 RGS7P49802 495 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 C16orf87Q6PH81 154 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 CDKL3Q8IVW4 592 aaPredicted RBP14.05□□□□□ -0.16
SYNE3-201ENST00000334258 SULF1Q8IWU6 871 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 TDRD5Q8NAT2 981 aaKnown RBP14.05□□□□□ -0.16
SYNE3-201ENST00000334258 FAM156AQ8NDB6 213 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 MAPK15Q8TD08 544 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 KCNN1Q92952 543 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 ADA2Q9NZK5 511 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 ADCY6O43306 1168 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 ATG7O95352 703 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 ERVK-10P10266 1014 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 EPHA3P29320 983 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 HSPA13P48723 471 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 PLOD1Q02809 727 aaPredicted RBP14.05□□□□□ -0.16
SYNE3-201ENST00000334258 C16orf72Q14CZ0 275 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 SLC44A4Q53GD3 710 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 LILRA2Q8N149 483 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 NUP93Q8N1F7 819 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 PDCD6IPQ8WUM4 868 aaKnown RBP14.05□□□□□ -0.16
SYNE3-201ENST00000334258 TMIGD2Q96BF3 282 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 GPRASP2Q96D09 838 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 MOCOSQ96EN8 888 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 ANKRD36BP1Q96IX9 119 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 FERMT1Q9BQL6 677 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 GCOM2Q9BZD3 368 aaPredicted RBP14.05□□□□□ -0.16
SYNE3-201ENST00000334258 CDH19Q9H159 772 aa14.05□□□□□ -0.16
SYNE3-201ENST00000334258 ZNF646O15015 1829 aaPredicted RBP14.05□□□□□ -0.16
SYNE3-201ENST00000334258 RGSL1A5PLK6 1076 aa14.04□□□□□ -0.16
SYNE3-201ENST00000334258 NDUFB5O43674 189 aa14.04□□□□□ -0.16
SYNE3-201ENST00000334258 CSPG5O95196 566 aa14.04□□□□□ -0.16
SYNE3-201ENST00000334258 F7P08709 466 aaPredicted RBP14.04□□□□□ -0.16
SYNE3-201ENST00000334258 KCNA2P16389 499 aa14.04□□□□□ -0.16
SYNE3-201ENST00000334258 ABCG1P45844 678 aa14.04□□□□□ -0.16
SYNE3-201ENST00000334258 MS4A2Q01362 244 aa14.04□□□□□ -0.16
SYNE3-201ENST00000334258 GBE1Q04446 702 aa14.04□□□□□ -0.16
SYNE3-201ENST00000334258 BTG3Q14201 252 aaPredicted RBP14.04□□□□□ -0.16
SYNE3-201ENST00000334258 CCDC92Q53HC0 331 aaPredicted RBP14.04□□□□□ -0.16
SYNE3-201ENST00000334258 DCAF15Q66K64 600 aa14.04□□□□□ -0.16
SYNE3-201ENST00000334258 HEATR6Q6AI08 1181 aaKnown RBP14.04□□□□□ -0.16
SYNE3-201ENST00000334258 PQLC3Q8N755 202 aa14.04□□□□□ -0.16
SYNE3-201ENST00000334258 DHX35Q9H5Z1 703 aaKnown RBP14.04□□□□□ -0.16
SYNE3-201ENST00000334258 MOCS1Q9NZB8 636 aa14.04□□□□□ -0.16
SYNE3-201ENST00000334258 PRPF19Q9UMS4 504 aaKnown RBP14.04□□□□□ -0.16
SYNE3-201ENST00000334258 ARHGEF37A1IGU5 675 aa14.04□□□□□ -0.16
SYNE3-201ENST00000334258 BCLAF3A2AJT9 711 aaKnown RBP14.04□□□□□ -0.16
SYNE3-201ENST00000334258 TMEM221A6NGB7 291 aa14.04□□□□□ -0.16
SYNE3-201ENST00000334258 USP2O75604 605 aaPredicted RBP14.04□□□□□ -0.16
SYNE3-201ENST00000334258 TGM2P21980 687 aa14.04□□□□□ -0.16
SYNE3-201ENST00000334258 MGAT1P26572 445 aa14.04□□□□□ -0.16
SYNE3-201ENST00000334258 MLH1P40692 756 aa14.04□□□□□ -0.16
SYNE3-201ENST00000334258 PTPN11Q06124 597 aaPredicted RBP14.04□□□□□ -0.16
SYNE3-201ENST00000334258 PPP2R5DQ14738 602 aa14.04□□□□□ -0.16
SYNE3-201ENST00000334258 STILQ15468 1287 aa14.04□□□□□ -0.16
SYNE3-201ENST00000334258 ADRM1Q16186 407 aa14.04□□□□□ -0.16
SYNE3-201ENST00000334258 GPR162Q16538 588 aa14.04□□□□□ -0.16
SYNE3-201ENST00000334258 CA9Q16790 459 aa14.04□□□□□ -0.16
SYNE3-201ENST00000334258 BOLA3Q53S33 107 aa14.04□□□□□ -0.16
SYNE3-201ENST00000334258 GFM2Q969S9 779 aaKnown RBP14.04□□□□□ -0.16
SYNE3-201ENST00000334258 MARK4Q96L34 752 aa14.04□□□□□ -0.16
SYNE3-201ENST00000334258 NUF2Q9BZD4 464 aa14.04□□□□□ -0.16
SYNE3-201ENST00000334258 ZNF302Q9NR11 478 aa14.04□□□□□ -0.16
SYNE3-201ENST00000334258 RRN3Q9NYV6 651 aa14.04□□□□□ -0.16
SYNE3-201ENST00000334258 HMGXB4Q9UGU5 601 aa14.04□□□□□ -0.16
SYNE3-201ENST00000334258 MAGED2Q9UNF1 606 aaPredicted RBP14.04□□□□□ -0.16
SYNE3-201ENST00000334258 ZNF195O14628 629 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 SAT1P21673 171 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 FGFR3P22607 806 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 ME2P23368 584 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 GARSP41250 739 aaKnown RBP14.03□□□□□ -0.16
SYNE3-201ENST00000334258 PDK2Q15119 407 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 STXBP5Q5T5C0 1151 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 EPGNQ6UW88 154 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 ZNF534Q76KX8 674 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 CCDC80Q76M96 950 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 GPC2Q8N158 579 aa14.03□□□□□ -0.16
SYNE3-201ENST00000334258 DCPSQ96C86 337 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms