RNA–Protein interactions for RNA: ENST00000636907.1

CLN3-252, Transcript of CLN3, battenin, humanhuman

TSL 2

Gene CLN3, Length 1,679 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-252ENST00000636907 CELF6Q96J87 481 aaKnown RBP17.35■□□□□ 0.37
CLN3-252ENST00000636907 C17orf80Q9BSJ5 609 aa17.35■□□□□ 0.37
CLN3-252ENST00000636907 NACA2Q9H009 215 aa17.35■□□□□ 0.37
CLN3-252ENST00000636907 MPP6Q9NZW5 540 aa17.35■□□□□ 0.37
CLN3-252ENST00000636907 VANGL2Q9ULK5 521 aa17.35■□□□□ 0.37
CLN3-252ENST00000636907 LZTS1Q9Y250 596 aa17.35■□□□□ 0.37
CLN3-252ENST00000636907 A0A0A0MRY4 1105 aa17.34■□□□□ 0.37
CLN3-252ENST00000636907 ARHGEF15O94989 841 aa17.34■□□□□ 0.37
CLN3-252ENST00000636907 METTL18O95568 372 aa17.34■□□□□ 0.37
CLN3-252ENST00000636907 NUDT17P0C025 328 aa17.34■□□□□ 0.37
CLN3-252ENST00000636907 MYOGP15173 224 aa17.34■□□□□ 0.37
CLN3-252ENST00000636907 DNAJB1P25685 340 aa17.34■□□□□ 0.37
CLN3-252ENST00000636907 KCNQ1P51787 676 aa17.34■□□□□ 0.37
CLN3-252ENST00000636907 PPIDQ08752 370 aaKnown RBP17.34■□□□□ 0.37
CLN3-252ENST00000636907 ZNF844Q08AG5 666 aa17.34■□□□□ 0.37
CLN3-252ENST00000636907 WASHC5Q12768 1159 aa17.34■□□□□ 0.37
CLN3-252ENST00000636907 AUHQ13825 339 aaKnown RBP17.34■□□□□ 0.37
CLN3-252ENST00000636907 ANKRD20A2Q5SQ80 823 aa17.34■□□□□ 0.37
CLN3-252ENST00000636907 CEP85LQ5SZL2 805 aa17.34■□□□□ 0.37
CLN3-252ENST00000636907 ANKRD20A1Q5TYW2 823 aa17.34■□□□□ 0.37
CLN3-252ENST00000636907 ANKRD20A3Q5VUR7 823 aa17.34■□□□□ 0.37
CLN3-252ENST00000636907 KLHDC10Q6PID8 442 aa17.34■□□□□ 0.37
CLN3-252ENST00000636907 CEP128Q6ZU80 1094 aa17.34■□□□□ 0.37
CLN3-252ENST00000636907 RELL1Q8IUW5 271 aa17.34■□□□□ 0.37
CLN3-252ENST00000636907 SPPL3Q8TCT6 385 aa17.34■□□□□ 0.37
CLN3-252ENST00000636907 SPATA13Q96N96 652 aa17.34■□□□□ 0.37
CLN3-252ENST00000636907 ETNK1Q9HBU6 452 aa17.34■□□□□ 0.37
CLN3-252ENST00000636907 ZNF334Q9HCZ1 680 aaPredicted RBP17.34■□□□□ 0.37
CLN3-252ENST00000636907 SAYSD1Q9NPB0 183 aa17.34■□□□□ 0.37
CLN3-252ENST00000636907 NINJ2Q9NZG7 142 aa17.34■□□□□ 0.37
CLN3-252ENST00000636907 SEPT10Q9P0V9 454 aa17.34■□□□□ 0.37
CLN3-252ENST00000636907 UXTQ9UBK9 157 aaPredicted RBP17.34■□□□□ 0.37
CLN3-252ENST00000636907 IRAK3Q9Y616 596 aa17.34■□□□□ 0.37
CLN3-252ENST00000636907 HIDE1A8MVS5 230 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 SMAPO00193 183 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 RNF103O00237 685 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 CHADO15335 359 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 SHBGP04278 402 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 ADH1AP07327 375 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 MX2P20592 715 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 GARSP41250 739 aaKnown RBP17.33■□□□□ 0.37
CLN3-252ENST00000636907 MAGEA4P43358 317 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 IRAK1P51617 712 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 KYNUQ16719 465 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 C9orf50Q5SZB4 431 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 SYCP2LQ5T4T6 812 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 PLPP4Q5VZY2 271 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 RAP1GAP2Q684P5 730 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 NUGGCQ68CJ6 796 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 C4orf22Q6V702 233 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 ARHGEF18Q6ZSZ5 1173 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 TMEM150AQ86TG1 271 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 ITIH5Q86UX2 942 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 ARHGAP12Q8IWW6 846 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 RTL3Q8N8U3 475 aaKnown RBP17.33■□□□□ 0.37
CLN3-252ENST00000636907 DEPDC1BQ8WUY9 529 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 POF1BQ8WVV4 589 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 DPF3Q92784 378 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 ARL8AQ96BM9 186 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 HDAC11Q96DB2 347 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 PRMT1Q99873 361 aaKnown RBP17.33■□□□□ 0.37
CLN3-252ENST00000636907 FERMT1Q9BQL6 677 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 CEP41Q9BYV8 373 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 BRD8Q9H0E9 1235 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 LRRC4CQ9HCJ2 640 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 NDFIP2Q9NV92 336 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 RWDD3Q9Y3V2 267 aa17.33■□□□□ 0.37
CLN3-252ENST00000636907 C2orf78A6NCI8 922 aa17.32■□□□□ 0.36
CLN3-252ENST00000636907 C2orf71A6NGG8 1288 aa17.32■□□□□ 0.36
CLN3-252ENST00000636907 WASH4PA8MWX3 477 aa17.32■□□□□ 0.36
CLN3-252ENST00000636907 GRXCR1A8MXD5 290 aa17.32■□□□□ 0.36
CLN3-252ENST00000636907 RNF40O75150 1001 aa17.32■□□□□ 0.36
CLN3-252ENST00000636907 STK10O94804 968 aaKnown RBP17.32■□□□□ 0.36
CLN3-252ENST00000636907 ACSL3O95573 720 aa17.32■□□□□ 0.36
CLN3-252ENST00000636907 TTC4O95801 387 aa17.32■□□□□ 0.36
CLN3-252ENST00000636907 PPP3CCP48454 512 aa17.32■□□□□ 0.36
CLN3-252ENST00000636907 HIF1AQ16665 826 aa17.32■□□□□ 0.36
CLN3-252ENST00000636907 FNBP1LQ5T0N5 605 aa17.32■□□□□ 0.36
CLN3-252ENST00000636907 NADSYN1Q6IA69 706 aa17.32■□□□□ 0.36
CLN3-252ENST00000636907 FBXL22Q6P050 247 aa17.32■□□□□ 0.36
CLN3-252ENST00000636907 LRRC31Q6UY01 552 aa17.32■□□□□ 0.36
CLN3-252ENST00000636907 CENPUQ71F23 418 aa17.32■□□□□ 0.36
CLN3-252ENST00000636907 NLRP14Q86W24 1093 aa17.32■□□□□ 0.36
CLN3-252ENST00000636907 GOLGA6L1Q8N7Z2 621 aa17.32■□□□□ 0.36
CLN3-252ENST00000636907 UHMK1Q8TAS1 419 aaKnown RBP17.32■□□□□ 0.36
CLN3-252ENST00000636907 C9orf72Q96LT7 481 aa17.32■□□□□ 0.36
CLN3-252ENST00000636907 EMILIN2Q9BXX0 1053 aa17.32■□□□□ 0.36
CLN3-252ENST00000636907 GOLGA6L7A0A1B0GV03 622 aa17.32■□□□□ 0.36
CLN3-252ENST00000636907 KCNK1O00180 336 aa17.32■□□□□ 0.36
CLN3-252ENST00000636907 DFFAO00273 331 aa17.32■□□□□ 0.36
CLN3-252ENST00000636907 OPHN1O60890 802 aa17.32■□□□□ 0.36
CLN3-252ENST00000636907 BANF1O75531 89 aa17.32■□□□□ 0.36
CLN3-252ENST00000636907 OAS1P00973 400 aaKnown RBP17.32■□□□□ 0.36
CLN3-252ENST00000636907 F11P03951 625 aa17.32■□□□□ 0.36
CLN3-252ENST00000636907 C8AP07357 584 aa17.32■□□□□ 0.36
CLN3-252ENST00000636907 MAGEA6P43360 314 aa17.32■□□□□ 0.36
CLN3-252ENST00000636907 EIF3BP55884 814 aaKnown RBP17.32■□□□□ 0.36
CLN3-252ENST00000636907 ARL4CP56559 192 aa17.32■□□□□ 0.36
CLN3-252ENST00000636907 PDIA2Q13087 525 aaKnown RBP17.32■□□□□ 0.36
CLN3-252ENST00000636907 FASTKD3Q14CZ7 662 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms