RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 BMT2Q1RMZ1 405 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 MBLAC2Q68D91 279 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 NAPEPLDQ6IQ20 393 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 CCDC186Q7Z3E2 898 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 DENND1CQ8IV53 801 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 SYCP3Q8IZU3 236 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 AHI1Q8N157 1196 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 C12orf29Q8N999 325 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 FAM184AQ8NB25 1140 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 DDI1Q8WTU0 396 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 EXTL1Q92935 676 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 FAM131CQ96AQ9 280 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 ELMO3Q96BJ8 720 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 CCDC97Q96F63 343 aaPredicted RBP8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 TNIP3Q96KP6 325 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 MRGPRX3Q96LB0 322 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 CCNL2Q96S94 520 aaPredicted RBP8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 ABCB8Q9NUT2 735 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 CLIC5Q9NZA1 410 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 SUN2Q9UH99 717 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 RASAL2Q9UJF2 1139 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 GGA2Q9UJY4 613 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 STOML2Q9UJZ1 356 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 ATXN7L1Q9ULK2 861 aaPredicted RBP8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 LIMCH1Q9UPQ0 1083 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 KIF3AQ9Y496 699 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 SPENQ96T58 3664 aaKnown RBP8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 FBN2P35556 2912 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 NUDT7P0C024 238 aa8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 FAM87AP0C7U9 286 aa8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 FAM200BP0CF97 657 aa8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 DLATP10515 647 aaKnown RBP8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 TGM2P21980 687 aa8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 RBMS1P29558 406 aaKnown RBP8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 SLC8A1P32418 973 aa8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 CD70P32970 193 aa8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 DRD3P35462 400 aa8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 DUSP3P51452 185 aaPredicted RBP8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 EFEMP1Q12805 493 aa8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 OVGP1Q12889 678 aa8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 ARID5BQ14865 1188 aa8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 TRIP4Q15650 581 aaPredicted RBP8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 HNRNPA1L2Q32P51 320 aaKnown RBP8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 ZSCAN23Q3MJ62 389 aa8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 MPPE1Q53F39 396 aa8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 C4orf17Q53FE4 359 aa8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 SLC45A4Q5BKX6 768 aa8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 C9orf64Q5T6V5 341 aa8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 HIST2H2BCQ6DN03 193 aa8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 TMC6Q7Z403 805 aa8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 PLEKHO2Q8TD55 490 aa8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 SYAP1Q96A49 352 aaPredicted RBP8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 ATXN7L3BQ96GX2 97 aa8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 APOLD1Q96LR9 279 aa8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 FAM129BQ96TA1 746 aa8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 FAM49BQ9NUQ9 324 aa8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 NAGPAQ9UK23 515 aa8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 INTS6Q9UL03 887 aaKnown RBP8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 TPX2Q9ULW0 747 aaKnown RBP8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 DOPEY1Q5JWR5 2465 aa8.05□□□□□ -1.12
HERPUD1-206ENST00000563343 CENPEQ02224 2701 aa8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 CELSR2Q9HCU4 2923 aa8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 CASC3O15234 703 aaKnown RBP8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 TGFB1I1O43294 461 aa8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 RNASEH2AO75792 299 aaKnown RBP8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 PIAS2O75928 621 aa8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 VNN1O95497 513 aa8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 GOT1P17174 413 aa8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 TNNI1P19237 187 aa8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 ADORA2BP29275 332 aa8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 LONP1P36776 959 aaKnown RBP8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 MLLT3P42568 568 aaPredicted RBP8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 CCR10P46092 362 aa8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 HARS2P49590 506 aaKnown RBP8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 NDST1P52848 882 aa8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 PDX1P52945 283 aa8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 CYP24A1Q07973 514 aa8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 E2F4Q16254 413 aa8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 SNRNP35Q16560 246 aaKnown RBP8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 SGO2Q562F6 1265 aa8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 CRYBG3Q68DQ2 2970 aa8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 SCARA5Q6ZMJ2 495 aa8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 SND1Q7KZF4 910 aaKnown RBP eCLIP8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 BHLHA9Q7RTU4 235 aa8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 MMAAQ8IVH4 418 aaKnown RBP8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 RDH13Q8NBN7 331 aa8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 GANCQ8TET4 914 aa8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 JAKMIP2Q96AA8 810 aa8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 TTC17Q96AE7 1141 aa8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 GRAMD1AQ96CP6 724 aa8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 SGF29Q96ES7 293 aa8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 EPSTI1Q96J88 318 aa8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 TWNKQ96RR1 684 aa8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 OSBPL2Q9H1P3 480 aa8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 EPN3Q9H201 632 aa8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 KIAA1586Q9HCI6 787 aa8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 STK17AQ9UEE5 414 aa8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 CYTH4Q9UIA0 394 aa8.04□□□□□ -1.12
HERPUD1-206ENST00000563343 ITIH6Q6UXX5 1313 aa8.03□□□□□ -1.12
HERPUD1-206ENST00000563343 TRPM6Q9BX84 2022 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms