RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 SERPINB11Q96P15 392 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 NOL6Q9H6R4 1146 aaKnown RBP9.16□□□□□ -0.94
TDP1-210ENST00000554976 RAB6BQ9NRW1 208 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 SLC27A5Q9Y2P5 690 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 TTLL3Q9Y4R7 772 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 CDY1Q9Y6F8 540 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 E7EVH7 732 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 AVILO75366 819 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 FAM155BO75949 473 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 SUN1O94901 812 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 CSF2RAP15509 400 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 BASP1P80723 227 aaKnown RBP9.16□□□□□ -0.94
TDP1-210ENST00000554976 TNK2Q07912 1038 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 PDK1Q15118 436 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 PKN2Q16513 984 aaKnown RBP9.16□□□□□ -0.94
TDP1-210ENST00000554976 USP41Q3LFD5 358 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 CCDC38Q502W7 563 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 SWT1Q5T5J6 900 aaKnown RBP9.16□□□□□ -0.94
TDP1-210ENST00000554976 DENND5BQ6ZUT9 1274 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 C14orf80Q86SX3 495 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 C10orf67Q8IYJ2 551 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 FATE1Q969F0 183 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 CENPTQ96BT3 561 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 BRD8Q9H0E9 1235 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 CXorf56Q9H5V9 222 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 ACSS3Q9H6R3 686 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 NDFIP2Q9NV92 336 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 PCDH10Q9P2E7 1040 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 PPARGC1AQ9UBK2 798 aaKnown RBP9.16□□□□□ -0.94
TDP1-210ENST00000554976 RNF103O00237 685 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 NCAM2O15394 837 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 OPHN1O60890 802 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 ZNF189O75820 626 aaPredicted RBP9.15□□□□□ -0.94
TDP1-210ENST00000554976 BAIAP3O94812 1187 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 PEX11BO96011 259 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 CCR1P32246 355 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 HTRA4P83105 476 aaPredicted RBP9.15□□□□□ -0.94
TDP1-210ENST00000554976 IFFO1Q0D2I5 559 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 EFTUD2Q15029 972 aaKnown RBP eCLIP9.15□□□□□ -0.942e-8■■■■■ 57.6
TDP1-210ENST00000554976 TRIP4Q15650 581 aaPredicted RBP9.15□□□□□ -0.94
TDP1-210ENST00000554976 FAXCQ5TGI0 409 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 STEAP4Q687X5 459 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 HEATR6Q6AI08 1181 aaKnown RBP9.15□□□□□ -0.94
TDP1-210ENST00000554976 DDX53Q86TM3 631 aaKnown RBP9.15□□□□□ -0.94
TDP1-210ENST00000554976 ANKMY2Q8IV38 441 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 DCAKDQ8WVC6 231 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 OVCA2Q8WZ82 227 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 MYRFLQ96LU7 910 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 CAPS2Q9BXY5 557 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 CCDC134Q9H6E4 229 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.15□□□□□ -0.94
TDP1-210ENST00000554976 BPTFQ12830 3046 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 GOLGA6L10A6NI86 522 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 DRGXA6NNA5 263 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 FOXO6A8MYZ6 492 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 E9PAM4 449 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 PPP1R12AO14974 1030 aaPredicted RBP9.15□□□□□ -0.94
TDP1-210ENST00000554976 YWHAQP27348 245 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 FDFT1P37268 417 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 ELK3P41970 407 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 MLLT6P55198 1093 aaPredicted RBP9.15□□□□□ -0.94
TDP1-210ENST00000554976 RING1Q06587 406 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 PSMD5Q16401 504 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 MS4A13Q5J8X5 152 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 NADSYN1Q6IA69 706 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 SRLQ86TD4 932 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 GPR65Q8IYL9 337 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 MPP5Q8N3R9 675 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 ARNTL2Q8WYA1 636 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 MYEOVQ96EZ4 313 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 EPAS1Q99814 870 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 PLCD4Q9BRC7 762 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 FNIP2Q9P278 1114 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 ACTL7BQ9Y614 415 aa9.15□□□□□ -0.94
TDP1-210ENST00000554976 NUP205Q92621 2012 aa9.15□□□□□ -0.95
TDP1-210ENST00000554976 FGF10O15520 208 aaPredicted RBP9.15□□□□□ -0.95
TDP1-210ENST00000554976 MAFKO60675 156 aa9.15□□□□□ -0.95
TDP1-210ENST00000554976 MLNP12872 115 aa9.15□□□□□ -0.95
TDP1-210ENST00000554976 CPB1P15086 417 aa9.15□□□□□ -0.95
TDP1-210ENST00000554976 CREB1P16220 341 aa9.15□□□□□ -0.95
TDP1-210ENST00000554976 PRKCHP24723 683 aa9.15□□□□□ -0.95
TDP1-210ENST00000554976 SSTR1P30872 391 aa9.15□□□□□ -0.95
TDP1-210ENST00000554976 GRIA1P42261 906 aa9.15□□□□□ -0.95
TDP1-210ENST00000554976 SLCO1A2P46721 670 aa9.15□□□□□ -0.95
TDP1-210ENST00000554976 ATP1A2P50993 1020 aa9.15□□□□□ -0.95
TDP1-210ENST00000554976 GUCY1A3Q02108 690 aa9.15□□□□□ -0.95
TDP1-210ENST00000554976 TAF10Q12962 218 aa9.15□□□□□ -0.95
TDP1-210ENST00000554976 DUSP4Q13115 394 aa9.15□□□□□ -0.95
TDP1-210ENST00000554976 HP1BP3Q5SSJ5 553 aaPredicted RBP9.15□□□□□ -0.95
TDP1-210ENST00000554976 ADGRD1Q6QNK2 874 aa9.15□□□□□ -0.95
TDP1-210ENST00000554976 ARHGAP36Q6ZRI8 547 aa9.15□□□□□ -0.95
TDP1-210ENST00000554976 SH2D5Q6ZV89 423 aa9.15□□□□□ -0.95
TDP1-210ENST00000554976 TMEM150AQ86TG1 271 aa9.15□□□□□ -0.95
TDP1-210ENST00000554976 SUGP1Q8IWZ8 645 aaKnown RBP9.15□□□□□ -0.95
TDP1-210ENST00000554976 TAB3Q8N5C8 712 aaPredicted RBP9.15□□□□□ -0.95
TDP1-210ENST00000554976 GPATCH11Q8N954 259 aa9.15□□□□□ -0.95
TDP1-210ENST00000554976 TRMT2BQ96GJ1 504 aaKnown RBP9.15□□□□□ -0.95
TDP1-210ENST00000554976 MLPHQ9BV36 600 aaPredicted RBP9.15□□□□□ -0.95
TDP1-210ENST00000554976 UBE2OQ9C0C9 1292 aaKnown RBP9.15□□□□□ -0.95
TDP1-210ENST00000554976 PPCSQ9HAB8 311 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms