RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 TMEM59LQ9UK28 342 aa25.52■■□□□ 1.68
UPF3A-209ENST00000492270 STAP1Q9ULZ2 295 aa25.52■■□□□ 1.68
UPF3A-209ENST00000492270 PCDHGA5Q9Y5G8 931 aa25.52■■□□□ 1.68
UPF3A-209ENST00000492270 H0Y626 953 aa25.51■■□□□ 1.67
UPF3A-209ENST00000492270 I6L893 689 aaPredicted RBP25.51■■□□□ 1.67
UPF3A-209ENST00000492270 MAP3K13O43283 966 aa25.51■■□□□ 1.67
UPF3A-209ENST00000492270 POLR2EP19388 210 aaKnown RBP25.51■■□□□ 1.67
UPF3A-209ENST00000492270 MMP8P22894 467 aa25.51■■□□□ 1.67
UPF3A-209ENST00000492270 DHPSP49366 369 aaPredicted RBP25.51■■□□□ 1.67
UPF3A-209ENST00000492270 NUMBP49757 651 aa25.51■■□□□ 1.67
UPF3A-209ENST00000492270 ATXN1P54253 815 aaKnown RBP25.51■■□□□ 1.67
UPF3A-209ENST00000492270 CENPCQ03188 943 aa25.51■■□□□ 1.67
UPF3A-209ENST00000492270 CACUL1Q86Y37 369 aa25.51■■□□□ 1.67
UPF3A-209ENST00000492270 NAP1L5Q96NT1 182 aaPredicted RBP25.51■■□□□ 1.67
UPF3A-209ENST00000492270 TMEM245Q9H330 911 aa25.51■■□□□ 1.67
UPF3A-209ENST00000492270 CBX8Q9HC52 389 aa25.51■■□□□ 1.67
UPF3A-209ENST00000492270 RRN3Q9NYV6 651 aa25.51■■□□□ 1.67
UPF3A-209ENST00000492270 HS3ST4Q9Y661 456 aa25.51■■□□□ 1.67
UPF3A-209ENST00000492270 IGHV1OR15-9A0A0B4J2B8 117 aa25.5■■□□□ 1.67
UPF3A-209ENST00000492270 BCLAF3A2AJT9 711 aaKnown RBP25.5■■□□□ 1.67
UPF3A-209ENST00000492270 ZBTB24O43167 697 aaPredicted RBP25.5■■□□□ 1.67
UPF3A-209ENST00000492270 GDF9O60383 454 aa25.5■■□□□ 1.67
UPF3A-209ENST00000492270 SYNCRIPO60506 623 aaKnown RBP25.5■■□□□ 1.67
UPF3A-209ENST00000492270 PAGE1O75459 146 aa25.5■■□□□ 1.67
UPF3A-209ENST00000492270 ADCY5O95622 1261 aa25.5■■□□□ 1.67
UPF3A-209ENST00000492270 DLDP09622 509 aaKnown RBP25.5■■□□□ 1.67
UPF3A-209ENST00000492270 UNGP13051 313 aaPredicted RBP25.5■■□□□ 1.67
UPF3A-209ENST00000492270 COPAP53621 1224 aa25.5■■□□□ 1.67
UPF3A-209ENST00000492270 DEUP1Q05D60 604 aa25.5■■□□□ 1.67
UPF3A-209ENST00000492270 BYSLQ13895 437 aaKnown RBP25.5■■□□□ 1.67
UPF3A-209ENST00000492270 TCEAL6Q6IPX3 200 aa25.5■■□□□ 1.67
UPF3A-209ENST00000492270 FBXL22Q6P050 247 aa25.5■■□□□ 1.67
UPF3A-209ENST00000492270 DEFB119Q8N690 84 aa25.5■■□□□ 1.67
UPF3A-209ENST00000492270 EMC1Q8N766 993 aa25.5■■□□□ 1.67
UPF3A-209ENST00000492270 ZNF557Q8N988 423 aaPredicted RBP25.5■■□□□ 1.67
UPF3A-209ENST00000492270 TCEAL3Q969E4 200 aa25.5■■□□□ 1.67
UPF3A-209ENST00000492270 IGSF8Q969P0 613 aa25.5■■□□□ 1.67
UPF3A-209ENST00000492270 CFAP57Q96MR6 1250 aa25.5■■□□□ 1.67
UPF3A-209ENST00000492270 PRDM16Q9HAZ2 1276 aa25.5■■□□□ 1.67
UPF3A-209ENST00000492270 TMPRSS4Q9NRS4 437 aa25.5■■□□□ 1.67
UPF3A-209ENST00000492270 PLA2G4CQ9UP65 541 aa25.5■■□□□ 1.67
UPF3A-209ENST00000492270 GON4LQ3T8J9 2241 aa25.49■■□□□ 1.67
UPF3A-209ENST00000492270 PI4KAP42356 2102 aa25.49■■□□□ 1.67
UPF3A-209ENST00000492270 ADAMTS9Q9P2N4 1935 aa25.49■■□□□ 1.67
UPF3A-209ENST00000492270 GJB6O95452 261 aa25.49■■□□□ 1.67
UPF3A-209ENST00000492270 ZNF806P0C7X5 589 aa25.49■■□□□ 1.67
UPF3A-209ENST00000492270 CSKP41240 450 aa25.49■■□□□ 1.67
UPF3A-209ENST00000492270 PTGER3P43115 390 aa25.49■■□□□ 1.67
UPF3A-209ENST00000492270 CXCR3P49682 368 aa25.49■■□□□ 1.67
UPF3A-209ENST00000492270 PTP4A2Q12974 167 aa25.49■■□□□ 1.67
UPF3A-209ENST00000492270 AUHQ13825 339 aaKnown RBP25.49■■□□□ 1.67
UPF3A-209ENST00000492270 E2F5Q15329 346 aa25.49■■□□□ 1.67
UPF3A-209ENST00000492270 CLEC16AQ2KHT3 1053 aa25.49■■□□□ 1.67
UPF3A-209ENST00000492270 SLC25A52Q3SY17 297 aa25.49■■□□□ 1.67
UPF3A-209ENST00000492270 PITRM1Q5JRX3 1037 aa25.49■■□□□ 1.67
UPF3A-209ENST00000492270 TRIM72Q6ZMU5 477 aa25.49■■□□□ 1.67
UPF3A-209ENST00000492270 LPCAT2Q7L5N7 544 aa25.49■■□□□ 1.67
UPF3A-209ENST00000492270 C14orf80Q86SX3 495 aa25.49■■□□□ 1.67
UPF3A-209ENST00000492270 LUZP1Q86V48 1076 aa25.49■■□□□ 1.67
UPF3A-209ENST00000492270 CCDC117Q8IWD4 279 aaPredicted RBP25.49■■□□□ 1.67
UPF3A-209ENST00000492270 CCAR2Q8N163 923 aaKnown RBP25.49■■□□□ 1.67
UPF3A-209ENST00000492270 BAP1Q92560 729 aa25.49■■□□□ 1.67
UPF3A-209ENST00000492270 PGAP3Q96FM1 320 aaPredicted RBP25.49■■□□□ 1.67
UPF3A-209ENST00000492270 TKTL2Q9H0I9 626 aa25.49■■□□□ 1.67
UPF3A-209ENST00000492270 RXFP3Q9NSD7 469 aa25.49■■□□□ 1.67
UPF3A-209ENST00000492270 ARHGEF38Q9NXL2 777 aa25.49■■□□□ 1.67
UPF3A-209ENST00000492270 VANGL2Q9ULK5 521 aa25.49■■□□□ 1.67
UPF3A-209ENST00000492270 SNX10Q9Y5X0 201 aa25.49■■□□□ 1.67
UPF3A-209ENST00000492270 A0A1B0GTH6 734 aa25.48■■□□□ 1.67
UPF3A-209ENST00000492270 ZNF217O75362 1048 aa25.48■■□□□ 1.67
UPF3A-209ENST00000492270 ATP5BP06576 529 aaKnown RBP25.48■■□□□ 1.67
UPF3A-209ENST00000492270 CTSOP43234 321 aaPredicted RBP25.48■■□□□ 1.67
UPF3A-209ENST00000492270 RAB6CQ53S08 254 aa25.48■■□□□ 1.67
UPF3A-209ENST00000492270 RABGAP1LQ5R372 815 aa25.48■■□□□ 1.67
UPF3A-209ENST00000492270 CYP2U1Q7Z449 544 aa25.48■■□□□ 1.67
UPF3A-209ENST00000492270 TMPRSS6Q8IU80 811 aa25.48■■□□□ 1.67
UPF3A-209ENST00000492270 APCDD1Q8J025 514 aa25.48■■□□□ 1.67
UPF3A-209ENST00000492270 TTC17Q96AE7 1141 aa25.48■■□□□ 1.67
UPF3A-209ENST00000492270 MYO19Q96H55 970 aa25.48■■□□□ 1.67
UPF3A-209ENST00000492270 RPRD1AQ96P16 312 aaPredicted RBP25.48■■□□□ 1.67
UPF3A-209ENST00000492270 SIK2Q9H0K1 926 aa25.48■■□□□ 1.67
UPF3A-209ENST00000492270 RAB6CQ9H0N0 254 aa25.48■■□□□ 1.67
UPF3A-209ENST00000492270 MTG2Q9H4K7 406 aa25.48■■□□□ 1.67
UPF3A-209ENST00000492270 WDCPQ9H6R7 721 aa25.48■■□□□ 1.67
UPF3A-209ENST00000492270 SEPT11Q9NVA2 429 aaKnown RBP25.48■■□□□ 1.67
UPF3A-209ENST00000492270 ATXN2Q99700 1313 aaKnown RBP25.47■■□□□ 1.67
UPF3A-209ENST00000492270 LOC105378220A0A1B0GUY1 285 aaPredicted RBP25.47■■□□□ 1.67
UPF3A-209ENST00000492270 PRR5-ARHGAP8B1AHC4 643 aa25.47■■□□□ 1.67
UPF3A-209ENST00000492270 ARHGAP8P85298 464 aa25.47■■□□□ 1.67
UPF3A-209ENST00000492270 RPL6Q02878 288 aaKnown RBP25.47■■□□□ 1.67
UPF3A-209ENST00000492270 CAMK2GQ13555 558 aaPredicted RBP25.47■■□□□ 1.67
UPF3A-209ENST00000492270 NUMA1Q14980 2115 aa25.47■■□□□ 1.67
UPF3A-209ENST00000492270 FILIP1LQ4L180 1135 aa25.47■■□□□ 1.67
UPF3A-209ENST00000492270 BRMS1LQ5PSV4 323 aa25.47■■□□□ 1.67
UPF3A-209ENST00000492270 BNIPLQ7Z465 357 aa25.47■■□□□ 1.67
UPF3A-209ENST00000492270 JOSD2Q8TAC2 188 aa25.47■■□□□ 1.67
UPF3A-209ENST00000492270 MRGPRX3Q96LB0 322 aa25.47■■□□□ 1.67
UPF3A-209ENST00000492270 AGPAT1Q99943 283 aa25.47■■□□□ 1.67
UPF3A-209ENST00000492270 VPS45Q9NRW7 570 aa25.47■■□□□ 1.67
UPF3A-209ENST00000492270 DLL3Q9NYJ7 618 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms