RNA–Protein interactions for RNA: ENST00000489907.2

SMG5-205, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG5, Length 535 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-205ENST00000489907 CBX4O00257 560 aa8.47□□□□□ -1.05
SMG5-205ENST00000489907 O00370 1275 aa8.47□□□□□ -1.05
SMG5-205ENST00000489907 MSI1O43347 362 aaKnown RBP8.47□□□□□ -1.05
SMG5-205ENST00000489907 LETM1O95202 739 aaPredicted RBP8.47□□□□□ -1.05
SMG5-205ENST00000489907 PABPC1P11940 636 aaKnown RBP8.47□□□□□ -1.05
SMG5-205ENST00000489907 GRK6P43250 576 aa8.47□□□□□ -1.05
SMG5-205ENST00000489907 RPL34P49207 117 aaKnown RBP8.47□□□□□ -1.05
SMG5-205ENST00000489907 HARS2P49590 506 aaKnown RBP8.47□□□□□ -1.05
SMG5-205ENST00000489907 ADIGQ0VDE8 80 aa8.47□□□□□ -1.05
SMG5-205ENST00000489907 SUZ12Q15022 739 aaKnown RBP8.47□□□□□ -1.05
SMG5-205ENST00000489907 GOLGA7BQ2TAP0 167 aa8.47□□□□□ -1.05
SMG5-205ENST00000489907 EDRF1Q3B7T1 1238 aa8.47□□□□□ -1.05
SMG5-205ENST00000489907 FSCBQ5H9T9 825 aa8.47□□□□□ -1.05
SMG5-205ENST00000489907 PRAMEF14Q5SWL7 426 aa8.47□□□□□ -1.05
SMG5-205ENST00000489907 C9orf64Q5T6V5 341 aa8.47□□□□□ -1.05
SMG5-205ENST00000489907 RFWD3Q6PCD5 774 aa8.47□□□□□ -1.05
SMG5-205ENST00000489907 DHRS13Q6UX07 377 aa8.47□□□□□ -1.05
SMG5-205ENST00000489907 USP30Q70CQ3 517 aa8.47□□□□□ -1.05
SMG5-205ENST00000489907 RSRC2Q7L4I2 434 aaKnown RBP8.47□□□□□ -1.05
SMG5-205ENST00000489907 GAS2L3Q86XJ1 694 aa8.47□□□□□ -1.05
SMG5-205ENST00000489907 AHI1Q8N157 1196 aa8.47□□□□□ -1.05
SMG5-205ENST00000489907 GALNT15Q8N3T1 639 aa8.47□□□□□ -1.05
SMG5-205ENST00000489907 FIBINQ8TAL6 211 aa8.47□□□□□ -1.05
SMG5-205ENST00000489907 SAP25Q8TEE9 199 aa8.47□□□□□ -1.05
SMG5-205ENST00000489907 TFAP2BQ92481 460 aa8.47□□□□□ -1.05
SMG5-205ENST00000489907 FAM131CQ96AQ9 280 aa8.47□□□□□ -1.05
SMG5-205ENST00000489907 SLC39A13Q96H72 371 aa8.47□□□□□ -1.05
SMG5-205ENST00000489907 LRIG1Q96JA1 1093 aa8.47□□□□□ -1.05
SMG5-205ENST00000489907 PRICKLE1Q96MT3 831 aaPredicted RBP8.47□□□□□ -1.05
SMG5-205ENST00000489907 NEUROG2Q9H2A3 272 aa8.47□□□□□ -1.05
SMG5-205ENST00000489907 FBRSQ9HAH7 460 aa8.47□□□□□ -1.05
SMG5-205ENST00000489907 SGK2Q9HBY8 427 aa8.47□□□□□ -1.05
SMG5-205ENST00000489907 ABCC13Q9NSE7 274 aa8.47□□□□□ -1.05
SMG5-205ENST00000489907 OLA1Q9NTK5 396 aaKnown RBP8.47□□□□□ -1.05
SMG5-205ENST00000489907 ADAMTS1Q9UHI8 967 aa8.47□□□□□ -1.05
SMG5-205ENST00000489907 PLA2G4CQ9UP65 541 aa8.47□□□□□ -1.05
SMG5-205ENST00000489907 GOLGA8CPA6NN73 597 aa8.46□□□□□ -1.06
SMG5-205ENST00000489907 E9PAM4 449 aa8.46□□□□□ -1.06
SMG5-205ENST00000489907 TLX3O43711 291 aaPredicted RBP8.46□□□□□ -1.06
SMG5-205ENST00000489907 ACSL4O60488 711 aa8.46□□□□□ -1.06
SMG5-205ENST00000489907 SIN3BO75182 1162 aa8.46□□□□□ -1.06
SMG5-205ENST00000489907 C1QL1O75973 258 aa8.46□□□□□ -1.06
SMG5-205ENST00000489907 FSBPO95073 299 aa8.46□□□□□ -1.06
SMG5-205ENST00000489907 PYGBP11216 843 aa8.46□□□□□ -1.06
SMG5-205ENST00000489907 VDRP11473 427 aa8.46□□□□□ -1.06
SMG5-205ENST00000489907 KRT13P13646 458 aa8.46□□□□□ -1.06
SMG5-205ENST00000489907 TRIM21P19474 475 aaKnown RBP8.46□□□□□ -1.06
SMG5-205ENST00000489907 RPL13P26373 211 aaKnown RBP8.46□□□□□ -1.06
SMG5-205ENST00000489907 MXI1P50539 228 aa8.46□□□□□ -1.06
SMG5-205ENST00000489907 PMS1P54277 932 aaKnown RBP8.46□□□□□ -1.06
SMG5-205ENST00000489907 BCAT1P54687 386 aa8.46□□□□□ -1.06
SMG5-205ENST00000489907 CLDN6P56747 220 aa8.46□□□□□ -1.06
SMG5-205ENST00000489907 RACK1P63244 317 aaKnown RBP8.46□□□□□ -1.06
SMG5-205ENST00000489907 IL9RQ01113 521 aa8.46□□□□□ -1.06
SMG5-205ENST00000489907 BST2Q10589 180 aaKnown RBP8.46□□□□□ -1.06
SMG5-205ENST00000489907 EIF4EBP2Q13542 120 aaPredicted RBP8.46□□□□□ -1.06
SMG5-205ENST00000489907 CUL2Q13617 745 aa8.46□□□□□ -1.06
SMG5-205ENST00000489907 FNDC3BQ53EP0 1204 aaKnown RBP8.46□□□□□ -1.06
SMG5-205ENST00000489907 ZNF658Q5TYW1 1059 aaPredicted RBP8.46□□□□□ -1.06
SMG5-205ENST00000489907 KIAA0895LQ68EN5 471 aa8.46□□□□□ -1.06
SMG5-205ENST00000489907 PMF1Q6P1K2 205 aa8.46□□□□□ -1.06
SMG5-205ENST00000489907 LCLAT1Q6UWP7 414 aa8.46□□□□□ -1.06
SMG5-205ENST00000489907 MMS22LQ6ZRQ5 1243 aa8.46□□□□□ -1.06
SMG5-205ENST00000489907 GATAD2AQ86YP4 633 aa8.46□□□□□ -1.06
SMG5-205ENST00000489907 SMYD4Q8IYR2 804 aaPredicted RBP8.46□□□□□ -1.06
SMG5-205ENST00000489907 AADATQ8N5Z0 425 aa8.46□□□□□ -1.06
SMG5-205ENST00000489907 PDCD7Q8N8D1 485 aaKnown RBP8.46□□□□□ -1.06
SMG5-205ENST00000489907 KDM1BQ8NB78 822 aa8.46□□□□□ -1.06
SMG5-205ENST00000489907 LMO3Q8TAP4 145 aa8.46□□□□□ -1.06
SMG5-205ENST00000489907 CLEC4CQ8WTT0 213 aa8.46□□□□□ -1.06
SMG5-205ENST00000489907 PTPRN2Q92932 1015 aa8.46□□□□□ -1.06
SMG5-205ENST00000489907 SMARCE1Q969G3 411 aa8.46□□□□□ -1.06
SMG5-205ENST00000489907 FCRL2Q96LA5 508 aaPredicted RBP8.46□□□□□ -1.06
SMG5-205ENST00000489907 SLC6A18Q96N87 628 aa8.46□□□□□ -1.06
SMG5-205ENST00000489907 ELF4Q99607 663 aaPredicted RBP8.46□□□□□ -1.06
SMG5-205ENST00000489907 PABPC3Q9H361 631 aaKnown RBP8.46□□□□□ -1.06
SMG5-205ENST00000489907 CNGB3Q9NQW8 809 aa8.46□□□□□ -1.06
SMG5-205ENST00000489907 ARHGAP20Q9P2F6 1191 aa8.46□□□□□ -1.06
SMG5-205ENST00000489907 SUN2Q9UH99 717 aa8.46□□□□□ -1.06
SMG5-205ENST00000489907 PCDHGA1Q9Y5H4 931 aa8.46□□□□□ -1.06
SMG5-205ENST00000489907 COL27A1Q8IZC6 1860 aaPredicted RBP8.46□□□□□ -1.06
SMG5-205ENST00000489907 SYCE3A1L190 88 aa8.45□□□□□ -1.06
SMG5-205ENST00000489907 PLK4O00444 970 aa8.45□□□□□ -1.06
SMG5-205ENST00000489907 PIK3R2O00459 728 aa8.45□□□□□ -1.06
SMG5-205ENST00000489907 MID1O15344 667 aa8.45□□□□□ -1.06
SMG5-205ENST00000489907 DFNA5O60443 496 aa8.45□□□□□ -1.06
SMG5-205ENST00000489907 TBL1XO60907 577 aa8.45□□□□□ -1.06
SMG5-205ENST00000489907 SMC2O95347 1197 aa8.45□□□□□ -1.06
SMG5-205ENST00000489907 CALCAP01258 141 aa8.45□□□□□ -1.06
SMG5-205ENST00000489907 DNTTP04053 509 aa8.45□□□□□ -1.06
SMG5-205ENST00000489907 ATP5BP06576 529 aaKnown RBP8.45□□□□□ -1.06
SMG5-205ENST00000489907 POLR2EP19388 210 aaKnown RBP8.45□□□□□ -1.06
SMG5-205ENST00000489907 ITPKBP27987 946 aa8.45□□□□□ -1.06
SMG5-205ENST00000489907 EIF2S3P41091 472 aaKnown RBP8.45□□□□□ -1.06
SMG5-205ENST00000489907 CSKP41240 450 aa8.45□□□□□ -1.06
SMG5-205ENST00000489907 PRCPP42785 496 aa8.45□□□□□ -1.06
SMG5-205ENST00000489907 CTSOP43234 321 aaPredicted RBP8.45□□□□□ -1.06
SMG5-205ENST00000489907 CCT8P50990 548 aa8.45□□□□□ -1.06
SMG5-205ENST00000489907 RPS24P62847 133 aaKnown RBP8.45□□□□□ -1.06
SMG5-205ENST00000489907 TYRO3Q06418 890 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms