RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 SEC31AO94979 1220 aaKnown RBP11.68□□□□□ -0.54
SND1-212ENST00000485871 TJP3O95049 919 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 LATS1O95835 1130 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 MOCS2O96007 188 aaPredicted RBP11.68□□□□□ -0.54
SND1-212ENST00000485871 PECAM1P16284 738 aaPredicted RBP11.68□□□□□ -0.54
SND1-212ENST00000485871 HOXB8P17481 243 aaPredicted RBP11.68□□□□□ -0.54
SND1-212ENST00000485871 AMPD1P23109 780 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 WEE1P30291 646 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 CORO1AP31146 461 aaKnown RBP11.68□□□□□ -0.54
SND1-212ENST00000485871 SLC6A4P31645 630 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 HTR7P34969 479 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 ARL4AP40617 200 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 CETN2P41208 172 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 IRAK1P51617 712 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 MTA1Q13330 715 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 NCBP2-AS2Q69YL0 99 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 EMBQ6PCB8 327 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 CCNI2Q6ZMN8 369 aaPredicted RBP11.68□□□□□ -0.54
SND1-212ENST00000485871 RFX8Q6ZV50 586 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 ADAT2Q7Z6V5 191 aaKnown RBP11.68□□□□□ -0.54
SND1-212ENST00000485871 RFX6Q8HWS3 928 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 UNC45BQ8IWX7 931 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 CMTM8Q8IZV2 173 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 RNF34Q969K3 372 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 MSLNLQ96KJ4 702 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 ZSWIM3Q96MP5 696 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 DCLK3Q9C098 648 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 NACA2Q9H009 215 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 KLC2Q9H0B6 622 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 EPC1Q9H2F5 836 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 ADAM7Q9H2U9 754 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 SLITRK6Q9H5Y7 841 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 LRRC19Q9H756 370 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 PRDM16Q9HAZ2 1276 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 PIDD1Q9HB75 910 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 MED4Q9NPJ6 270 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 ETNK2Q9NVF9 386 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 SMPD4Q9NXE4 827 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 ZNF212Q9UDV6 495 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 ZMYM5Q9UJ78 669 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 AGO1Q9UL18 857 aaKnown RBP11.68□□□□□ -0.54
SND1-212ENST00000485871 MFHAS1Q9Y4C4 1052 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 SHROOM3Q8TF72 1996 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 XIRP2A4UGR9 3374 aa11.68□□□□□ -0.54
SND1-212ENST00000485871 MYOFQ9NZM1 2061 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 GOLGA6L10A0A0M3HER8 536 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 GOLGA6L7A0A1B0GV03 622 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 SPDYE4A6NLX3 237 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 DRGXA6NNA5 263 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 WASH4PA8MWX3 477 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 E9PAM4 449 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 EEF2KO00418 725 aaKnown RBP11.67□□□□□ -0.54
SND1-212ENST00000485871 KRIT1O00522 736 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 CREB3O43889 395 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 PHF2O75151 1096 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 PRAMEF12O95522 483 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 CKMP06732 381 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 ERCC2P18074 760 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 TPI1P60174 286 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 CBX1P83916 185 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 USP4Q13107 963 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 AUHQ13825 339 aaKnown RBP11.67□□□□□ -0.54
SND1-212ENST00000485871 TFDP2Q14188 446 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 PAFAH1B3Q15102 231 aaKnown RBP11.67□□□□□ -0.54
SND1-212ENST00000485871 NOMO1Q15155 1222 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 CCNG2Q16589 344 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 ARHGAP15Q53QZ3 475 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 HSP90B2PQ58FF3 399 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 ACBD5Q5T8D3 534 aaPredicted RBP11.67□□□□□ -0.54
SND1-212ENST00000485871 RAP1GAP2Q684P5 730 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 FBXL22Q6P050 247 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 TTC27Q6P3X3 843 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 NLRP14Q86W24 1093 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 NPAS3Q8IXF0 933 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 CCDC26Q8TAB7 109 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 SLC35B2Q8TB61 432 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 ACTL9Q8TC94 416 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 MAIP1Q8WWC4 291 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 ING5Q8WYH8 240 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 USP13Q92995 863 aaPredicted RBP11.67□□□□□ -0.54
SND1-212ENST00000485871 IGSF8Q969P0 613 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 PRICKLE1Q96MT3 831 aaPredicted RBP11.67□□□□□ -0.54
SND1-212ENST00000485871 RUNDC3BQ96NL0 473 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 EPAS1Q99814 870 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 APOL5Q9BWW9 433 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 SIK2Q9H0K1 926 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 PPARGC1AQ9UBK2 798 aaKnown RBP11.67□□□□□ -0.54
SND1-212ENST00000485871 CCL26Q9Y258 94 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 MRPS23Q9Y3D9 190 aaKnown RBP11.67□□□□□ -0.54
SND1-212ENST00000485871 COL4A3Q01955 1670 aa11.67□□□□□ -0.54
SND1-212ENST00000485871 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.66□□□□□ -0.54
SND1-212ENST00000485871 APOC4-APOC2K7ER74 178 aa11.66□□□□□ -0.54
SND1-212ENST00000485871 LEFTY2O00292 366 aa11.66□□□□□ -0.54
SND1-212ENST00000485871 APOL1O14791 398 aa11.66□□□□□ -0.54
SND1-212ENST00000485871 APOC2P02655 101 aa11.66□□□□□ -0.54
SND1-212ENST00000485871 SRGAP2BP0DMP2 458 aa11.66□□□□□ -0.54
SND1-212ENST00000485871 IRF1P10914 325 aa11.66□□□□□ -0.54
SND1-212ENST00000485871 TACR2P21452 398 aa11.66□□□□□ -0.54
SND1-212ENST00000485871 TGM2P21980 687 aa11.66□□□□□ -0.54
SND1-212ENST00000485871 HARS2P49590 506 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms