RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 PRDM12Q9H4Q4 367 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 ENTPD7Q9NQZ7 604 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 PPARGC1AQ9UBK2 798 aaKnown RBP9.66□□□□□ -0.86
VPS52-216ENST00000471309 XPO7Q9UIA9 1087 aaKnown RBP9.66□□□□□ -0.86
VPS52-216ENST00000471309 PLAAQ9Y263 795 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 GBF1Q92538 1859 aa9.66□□□□□ -0.86
VPS52-216ENST00000471309 C2orf71A6NGG8 1288 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 H0YGN5 161 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 H3BQF6 201 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 RNF103O00237 685 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 EIF3HO15372 352 aaKnown RBP eCLIP9.65□□□□□ -0.86
VPS52-216ENST00000471309 RIPK2O43353 540 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 COCHO43405 550 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 OPA1O60313 960 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 OPHN1O60890 802 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 TMEM63AO94886 807 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 CXCL14O95715 111 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 OLFM2O95897 454 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 SYF2O95926 243 aaKnown RBP9.65□□□□□ -0.86
VPS52-216ENST00000471309 OAS1P00973 400 aaKnown RBP9.65□□□□□ -0.86
VPS52-216ENST00000471309 RB1P06400 928 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 C8AP07357 584 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 SRGAP2BP0DMP2 458 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 RHOQP17081 205 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 OAS2P29728 719 aaKnown RBP9.65□□□□□ -0.86
VPS52-216ENST00000471309 GARSP41250 739 aaKnown RBP9.65□□□□□ -0.86
VPS52-216ENST00000471309 NRLP54845 237 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 EIF3BP55884 814 aaKnown RBP9.65□□□□□ -0.86
VPS52-216ENST00000471309 ERVFC1P60507 584 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 FAM193AP78312 1265 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 COG7P83436 770 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 CBLBQ13191 982 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 AUHQ13825 339 aaKnown RBP9.65□□□□□ -0.86
VPS52-216ENST00000471309 KCNJ11Q14654 390 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 HIF1AQ16665 826 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 ANKRD22Q5VYY1 191 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 AFMIDQ63HM1 303 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 DENND2CQ68D51 928 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 RWDD4Q6NW29 188 aaKnown RBP9.65□□□□□ -0.86
VPS52-216ENST00000471309 LRRC31Q6UY01 552 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 PPP1R21Q6ZMI0 780 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 ARHGEF18Q6ZSZ5 1173 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 CENPUQ71F23 418 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 B4GALNT4Q76KP1 1039 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 RTL10Q7L3V2 364 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 DNAJB7Q7Z6W7 309 aaPredicted RBP9.65□□□□□ -0.86
VPS52-216ENST00000471309 NLRP14Q86W24 1093 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 CCDC25Q86WR0 208 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 RTL3Q8N8U3 475 aaKnown RBP9.65□□□□□ -0.86
VPS52-216ENST00000471309 MRPL43Q8N983 215 aaKnown RBP9.65□□□□□ -0.86
VPS52-216ENST00000471309 CCDC110Q8TBZ0 833 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 SPPL3Q8TCT6 385 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 POF1BQ8WVV4 589 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 AZIN2Q96A70 460 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 P2RY11Q96G91 374 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 SAMD11Q96NU1 681 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 RBM15Q96T37 977 aaKnown RBP eCLIP9.65□□□□□ -0.86
VPS52-216ENST00000471309 PRMT1Q99873 361 aaKnown RBP9.65□□□□□ -0.86
VPS52-216ENST00000471309 C17orf80Q9BSJ5 609 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 FRMD8Q9BZ67 464 aaPredicted RBP9.65□□□□□ -0.86
VPS52-216ENST00000471309 ZYG11BQ9C0D3 744 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 NACA2Q9H009 215 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 TLR9Q9NR96 1032 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 RAB6BQ9NRW1 208 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 DONSONQ9NYP3 566 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 NFS1Q9Y697 457 aa9.65□□□□□ -0.86
VPS52-216ENST00000471309 ANAPC1Q9H1A4 1944 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 DRGXA6NNA5 263 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 HIDE1A8MVS5 230 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 E7ESA3 106 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 RRP9O43818 475 aaKnown RBP9.64□□□□□ -0.87
VPS52-216ENST00000471309 LATS1O95835 1130 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 GLUD1P00367 558 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 LRG1P02750 347 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 F11P03951 625 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 TPSB2P20231 275 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 DNAJB1P25685 340 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 ARL4CP56559 192 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 ZNF844Q08AG5 666 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 AP1B1Q10567 949 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 WASHC5Q12768 1159 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 SEMA5AQ13591 1074 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 TPSAB1Q15661 275 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 C5orf22Q49AR2 442 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 PABPC1LQ4VXU2 614 aaKnown RBP9.64□□□□□ -0.87
VPS52-216ENST00000471309 ANKRD20A2Q5SQ80 823 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 ANKRD20A1Q5TYW2 823 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 ANKRD20A3Q5VUR7 823 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 PLPP4Q5VZY2 271 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 C14orf80Q86SX3 495 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 TMEM150AQ86TG1 271 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 TMC8Q8IU68 726 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 LRRC49Q8IUZ0 686 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 ARHGAP12Q8IWW6 846 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 TP53INP2Q8IXH6 220 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 CCDC13Q8IYE1 715 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 UMODL1-AS1Q8N2C9 162 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 CCDC33Q8N5R6 958 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 GOLGA6L1Q8N7Z2 621 aa9.64□□□□□ -0.87
VPS52-216ENST00000471309 KREMEN2Q8NCW0 462 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms