RNA–Protein interactions for RNA: ENST00000405025.5

HDAC11-206, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-206ENST00000405025 NT5C3BQ969T7 300 aa27.19■■□□□ 1.94
HDAC11-206ENST00000405025 TBCBQ99426 244 aa27.19■■□□□ 1.94
HDAC11-206ENST00000405025 TMEM245Q9H330 911 aa27.19■■□□□ 1.94
HDAC11-206ENST00000405025 RTN4Q9NQC3 1192 aaKnown RBP27.19■■□□□ 1.94
HDAC11-206ENST00000405025 DLL3Q9NYJ7 618 aa27.19■■□□□ 1.94
HDAC11-206ENST00000405025 SLC12A6Q9UHW9 1150 aa27.19■■□□□ 1.94
HDAC11-206ENST00000405025 CEP192Q8TEP8 1941 aa27.19■■□□□ 1.94
HDAC11-206ENST00000405025 LOC105378220A0A1B0GUY1 285 aaPredicted RBP27.18■■□□□ 1.94
HDAC11-206ENST00000405025 PRR5-ARHGAP8B1AHC4 643 aa27.18■■□□□ 1.94
HDAC11-206ENST00000405025 I6L893 689 aaPredicted RBP27.18■■□□□ 1.94
HDAC11-206ENST00000405025 SYNCRIPO60506 623 aaKnown RBP27.18■■□□□ 1.94
HDAC11-206ENST00000405025 POLR2EP19388 210 aaKnown RBP27.18■■□□□ 1.94
HDAC11-206ENST00000405025 CSKP41240 450 aa27.18■■□□□ 1.94
HDAC11-206ENST00000405025 PTGER3P43115 390 aa27.18■■□□□ 1.94
HDAC11-206ENST00000405025 COPAP53621 1224 aa27.18■■□□□ 1.94
HDAC11-206ENST00000405025 ARHGAP8P85298 464 aa27.18■■□□□ 1.94
HDAC11-206ENST00000405025 CENPCQ03188 943 aa27.18■■□□□ 1.94
HDAC11-206ENST00000405025 FBXL22Q6P050 247 aa27.18■■□□□ 1.94
HDAC11-206ENST00000405025 LPCAT2Q7L5N7 544 aa27.18■■□□□ 1.94
HDAC11-206ENST00000405025 CACUL1Q86Y37 369 aa27.18■■□□□ 1.94
HDAC11-206ENST00000405025 DEFB119Q8N690 84 aa27.18■■□□□ 1.94
HDAC11-206ENST00000405025 MSANTD4Q8NCY6 345 aa27.18■■□□□ 1.94
HDAC11-206ENST00000405025 TMEM59LQ9UK28 342 aa27.18■■□□□ 1.94
HDAC11-206ENST00000405025 HS3ST4Q9Y661 456 aa27.18■■□□□ 1.94
HDAC11-206ENST00000405025 PAGE1O75459 146 aa27.17■■□□□ 1.94
HDAC11-206ENST00000405025 ADCY5O95622 1261 aa27.17■■□□□ 1.94
HDAC11-206ENST00000405025 CAVIN2O95810 425 aa27.17■■□□□ 1.94
HDAC11-206ENST00000405025 DLDP09622 509 aaKnown RBP27.17■■□□□ 1.94
HDAC11-206ENST00000405025 MMP8P22894 467 aa27.17■■□□□ 1.94
HDAC11-206ENST00000405025 ATXN1P54253 815 aaKnown RBP27.17■■□□□ 1.94
HDAC11-206ENST00000405025 CYP2U1Q7Z449 544 aa27.17■■□□□ 1.94
HDAC11-206ENST00000405025 ZNF557Q8N988 423 aaPredicted RBP27.17■■□□□ 1.94
HDAC11-206ENST00000405025 IGSF8Q969P0 613 aa27.17■■□□□ 1.94
HDAC11-206ENST00000405025 TTC17Q96AE7 1141 aa27.17■■□□□ 1.94
HDAC11-206ENST00000405025 C11orf70Q9BRQ4 267 aa27.17■■□□□ 1.94
HDAC11-206ENST00000405025 PRDM16Q9HAZ2 1276 aa27.17■■□□□ 1.94
HDAC11-206ENST00000405025 METTL5Q9NRN9 209 aaKnown RBP27.17■■□□□ 1.94
HDAC11-206ENST00000405025 VPS45Q9NRW7 570 aa27.17■■□□□ 1.94
HDAC11-206ENST00000405025 RRN3Q9NYV6 651 aa27.17■■□□□ 1.94
HDAC11-206ENST00000405025 STAP1Q9ULZ2 295 aa27.17■■□□□ 1.94
HDAC11-206ENST00000405025 PLA2G4CQ9UP65 541 aa27.17■■□□□ 1.94
HDAC11-206ENST00000405025 SNX10Q9Y5X0 201 aa27.17■■□□□ 1.94
HDAC11-206ENST00000405025 H0Y626 953 aa27.16■■□□□ 1.94
HDAC11-206ENST00000405025 CXCR3P49682 368 aa27.16■■□□□ 1.94
HDAC11-206ENST00000405025 NUMBP49757 651 aa27.16■■□□□ 1.94
HDAC11-206ENST00000405025 RPL6Q02878 288 aaKnown RBP27.16■■□□□ 1.94
HDAC11-206ENST00000405025 AUHQ13825 339 aaKnown RBP27.16■■□□□ 1.94
HDAC11-206ENST00000405025 E2F5Q15329 346 aa27.16■■□□□ 1.94
HDAC11-206ENST00000405025 PITRM1Q5JRX3 1037 aa27.16■■□□□ 1.94
HDAC11-206ENST00000405025 C14orf80Q86SX3 495 aa27.16■■□□□ 1.94
HDAC11-206ENST00000405025 TMPRSS6Q8IU80 811 aa27.16■■□□□ 1.94
HDAC11-206ENST00000405025 MYO19Q96H55 970 aa27.16■■□□□ 1.94
HDAC11-206ENST00000405025 MTG2Q9H4K7 406 aa27.16■■□□□ 1.94
HDAC11-206ENST00000405025 TMPRSS4Q9NRS4 437 aa27.16■■□□□ 1.94
HDAC11-206ENST00000405025 CDV3Q9UKY7 258 aaKnown RBP27.16■■□□□ 1.94
HDAC11-206ENST00000405025 VANGL2Q9ULK5 521 aa27.16■■□□□ 1.94
HDAC11-206ENST00000405025 ZNF217O75362 1048 aa27.15■■□□□ 1.94
HDAC11-206ENST00000405025 GJB6O95452 261 aa27.15■■□□□ 1.94
HDAC11-206ENST00000405025 ATP5BP06576 529 aaKnown RBP27.15■■□□□ 1.94
HDAC11-206ENST00000405025 UNGP13051 313 aaPredicted RBP27.15■■□□□ 1.94
HDAC11-206ENST00000405025 CTSOP43234 321 aaPredicted RBP27.15■■□□□ 1.94
HDAC11-206ENST00000405025 DEUP1Q05D60 604 aa27.15■■□□□ 1.94
HDAC11-206ENST00000405025 PTP4A2Q12974 167 aa27.15■■□□□ 1.94
HDAC11-206ENST00000405025 CAMK2GQ13555 558 aaPredicted RBP27.15■■□□□ 1.94
HDAC11-206ENST00000405025 PUM1Q14671 1186 aaKnown RBP eCLIP27.15■■□□□ 1.94
HDAC11-206ENST00000405025 SLC25A52Q3SY17 297 aa27.15■■□□□ 1.94
HDAC11-206ENST00000405025 AASDHQ4L235 1098 aaPredicted RBP27.15■■□□□ 1.94
HDAC11-206ENST00000405025 TRIM72Q6ZMU5 477 aa27.15■■□□□ 1.94
HDAC11-206ENST00000405025 APCDD1Q8J025 514 aa27.15■■□□□ 1.94
HDAC11-206ENST00000405025 CCAR2Q8N163 923 aaKnown RBP27.15■■□□□ 1.94
HDAC11-206ENST00000405025 EMC1Q8N766 993 aa27.15■■□□□ 1.94
HDAC11-206ENST00000405025 C12orf50Q8NA57 414 aaPredicted RBP27.15■■□□□ 1.94
HDAC11-206ENST00000405025 PIGKQ92643 395 aa27.15■■□□□ 1.94
HDAC11-206ENST00000405025 PGAP3Q96FM1 320 aaPredicted RBP27.15■■□□□ 1.94
HDAC11-206ENST00000405025 MRGPRX3Q96LB0 322 aa27.15■■□□□ 1.94
HDAC11-206ENST00000405025 CFAP57Q96MR6 1250 aa27.15■■□□□ 1.94
HDAC11-206ENST00000405025 NAP1L5Q96NT1 182 aaPredicted RBP27.15■■□□□ 1.94
HDAC11-206ENST00000405025 TKTL2Q9H0I9 626 aa27.15■■□□□ 1.94
HDAC11-206ENST00000405025 ARHGEF38Q9NXL2 777 aa27.15■■□□□ 1.94
HDAC11-206ENST00000405025 ATXN2Q99700 1313 aaKnown RBP27.15■■□□□ 1.94
HDAC11-206ENST00000405025 PATE3B3GLJ2 98 aa27.14■■□□□ 1.94
HDAC11-206ENST00000405025 CLEC16AQ2KHT3 1053 aa27.14■■□□□ 1.94
HDAC11-206ENST00000405025 RABGAP1LQ5R372 815 aa27.14■■□□□ 1.94
HDAC11-206ENST00000405025 SLC36A4Q6YBV0 504 aa27.14■■□□□ 1.94
HDAC11-206ENST00000405025 CCDC117Q8IWD4 279 aaPredicted RBP27.14■■□□□ 1.94
HDAC11-206ENST00000405025 NETO1Q8TDF5 533 aa27.14■■□□□ 1.94
HDAC11-206ENST00000405025 BAP1Q92560 729 aa27.14■■□□□ 1.94
HDAC11-206ENST00000405025 RPRD1AQ96P16 312 aaPredicted RBP27.14■■□□□ 1.94
HDAC11-206ENST00000405025 SIK2Q9H0K1 926 aa27.14■■□□□ 1.94
HDAC11-206ENST00000405025 CBX8Q9HC52 389 aa27.14■■□□□ 1.94
HDAC11-206ENST00000405025 KIAA1522Q9P206 1035 aaPredicted RBP27.14■■□□□ 1.94
HDAC11-206ENST00000405025 USP36Q9P275 1121 aaKnown RBP27.14■■□□□ 1.94
HDAC11-206ENST00000405025 PLEKHG6Q3KR16 790 aa27.13■■□□□ 1.93
HDAC11-206ENST00000405025 RAB6CQ53S08 254 aa27.13■■□□□ 1.93
HDAC11-206ENST00000405025 BRMS1LQ5PSV4 323 aa27.13■■□□□ 1.93
HDAC11-206ENST00000405025 CXorf57Q6NSI4 855 aaKnown RBP27.13■■□□□ 1.93
HDAC11-206ENST00000405025 BNIPLQ7Z465 357 aa27.13■■□□□ 1.93
HDAC11-206ENST00000405025 OR2T3Q8NH03 318 aa27.13■■□□□ 1.93
HDAC11-206ENST00000405025 SIPA1Q96FS4 1042 aa27.13■■□□□ 1.93
HDAC11-206ENST00000405025 RAB6CQ9H0N0 254 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms