RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 NETO2Q8NC67 525 aa28.33■■■□□ 2.13
CPNE1-203ENST00000397442 GRK7Q8WTQ7 553 aa28.33■■■□□ 2.13
CPNE1-203ENST00000397442 MPP6Q9NZW5 540 aa28.33■■■□□ 2.13
CPNE1-203ENST00000397442 FEZ2Q9UHY8 353 aaPredicted RBP28.33■■■□□ 2.13
CPNE1-203ENST00000397442 DRGXA6NNA5 263 aa28.32■■■□□ 2.12
CPNE1-203ENST00000397442 LINC01565O15544 149 aa28.32■■■□□ 2.12
CPNE1-203ENST00000397442 TACR2P21452 398 aa28.32■■■□□ 2.12
CPNE1-203ENST00000397442 GUCY2DQ02846 1103 aa28.32■■■□□ 2.12
CPNE1-203ENST00000397442 B4GALNT4Q76KP1 1039 aa28.32■■■□□ 2.12
CPNE1-203ENST00000397442 NLRP14Q86W24 1093 aa28.32■■■□□ 2.12
CPNE1-203ENST00000397442 CHSY1Q86X52 802 aa28.32■■■□□ 2.12
CPNE1-203ENST00000397442 ALLCQ8N6M5 410 aa28.32■■■□□ 2.12
CPNE1-203ENST00000397442 TTYH1Q9H313 450 aaPredicted RBP28.32■■■□□ 2.12
CPNE1-203ENST00000397442 TASP1Q9H6P5 420 aa28.32■■■□□ 2.12
CPNE1-203ENST00000397442 STOML2Q9UJZ1 356 aa28.32■■■□□ 2.12
CPNE1-203ENST00000397442 RAB21Q9UL25 225 aa28.32■■■□□ 2.12
CPNE1-203ENST00000397442 SOBPA7XYQ1 873 aa28.32■■■□□ 2.12
CPNE1-203ENST00000397442 VSNL1P62760 191 aa28.32■■■□□ 2.12
CPNE1-203ENST00000397442 XRCC4Q13426 336 aa28.32■■■□□ 2.12
CPNE1-203ENST00000397442 TRADDQ15628 312 aa28.32■■■□□ 2.12
CPNE1-203ENST00000397442 C5orf22Q49AR2 442 aa28.32■■■□□ 2.12
CPNE1-203ENST00000397442 WDR93Q6P2C0 686 aa28.32■■■□□ 2.12
CPNE1-203ENST00000397442 Q6ZNB5 142 aa28.32■■■□□ 2.12
CPNE1-203ENST00000397442 CMTM8Q8IZV2 173 aa28.32■■■□□ 2.12
CPNE1-203ENST00000397442 CCDC33Q8N5R6 958 aa28.32■■■□□ 2.12
CPNE1-203ENST00000397442 SEC14L1Q92503 715 aa28.32■■■□□ 2.12
CPNE1-203ENST00000397442 CATSPERBQ9H7T0 1116 aa28.32■■■□□ 2.12
CPNE1-203ENST00000397442 PIDD1Q9HB75 910 aa28.32■■■□□ 2.12
CPNE1-203ENST00000397442 EPB41L5Q9HCM4 733 aa28.32■■■□□ 2.12
CPNE1-203ENST00000397442 GDF3Q9NR23 364 aa28.32■■■□□ 2.12
CPNE1-203ENST00000397442 COLQQ9Y215 455 aaPredicted RBP28.32■■■□□ 2.12
CPNE1-203ENST00000397442 ESYT3A0FGR9 886 aa28.31■■■□□ 2.12
CPNE1-203ENST00000397442 WASH4PA8MWX3 477 aa28.31■■■□□ 2.12
CPNE1-203ENST00000397442 MLLT1Q03111 559 aaPredicted RBP28.31■■■□□ 2.12
CPNE1-203ENST00000397442 LMNB2Q03252 620 aa28.31■■■□□ 2.12
CPNE1-203ENST00000397442 ARHGAP15Q53QZ3 475 aa28.31■■■□□ 2.12
CPNE1-203ENST00000397442 LRRC31Q6UY01 552 aa28.31■■■□□ 2.12
CPNE1-203ENST00000397442 GLIS1Q8NBF1 620 aa28.31■■■□□ 2.12
CPNE1-203ENST00000397442 LRRN4Q8WUT4 740 aa28.31■■■□□ 2.12
CPNE1-203ENST00000397442 ERP44Q9BS26 406 aa28.31■■■□□ 2.12
CPNE1-203ENST00000397442 PRDM12Q9H4Q4 367 aa28.31■■■□□ 2.12
CPNE1-203ENST00000397442 NDFIP2Q9NV92 336 aa28.31■■■□□ 2.12
CPNE1-203ENST00000397442 ARHGAP26Q9UNA1 814 aa28.31■■■□□ 2.12
CPNE1-203ENST00000397442 ZNF197O14709 1029 aa28.3■■■□□ 2.12
CPNE1-203ENST00000397442 CNTN5O94779 1100 aa28.3■■■□□ 2.12
CPNE1-203ENST00000397442 CEBPBP17676 345 aa28.3■■■□□ 2.12
CPNE1-203ENST00000397442 GDF10P55107 478 aa28.3■■■□□ 2.12
CPNE1-203ENST00000397442 ALFQ53S48 1182 aa28.3■■■□□ 2.12
CPNE1-203ENST00000397442 ADGRF1Q5T601 910 aa28.3■■■□□ 2.12
CPNE1-203ENST00000397442 DUPD1Q68J44 220 aa28.3■■■□□ 2.12
CPNE1-203ENST00000397442 RFWD3Q6PCD5 774 aa28.3■■■□□ 2.12
CPNE1-203ENST00000397442 RTL3Q8N8U3 475 aaKnown RBP28.3■■■□□ 2.12
CPNE1-203ENST00000397442 RUBCNQ92622 972 aa28.3■■■□□ 2.12
CPNE1-203ENST00000397442 ZYG11BQ9C0D3 744 aa28.3■■■□□ 2.12
CPNE1-203ENST00000397442 SMG9Q9H0W8 520 aaKnown RBP28.3■■■□□ 2.12
CPNE1-203ENST00000397442 LMCD1Q9NZU5 365 aa28.3■■■□□ 2.12
CPNE1-203ENST00000397442 ZNF212Q9UDV6 495 aa28.3■■■□□ 2.12
CPNE1-203ENST00000397442 NUP205Q92621 2012 aa28.3■■■□□ 2.12
CPNE1-203ENST00000397442 PRRC2BQ5JSZ5 2229 aaKnown RBP28.3■■■□□ 2.12
CPNE1-203ENST00000397442 H7C0C1 242 aa28.29■■■□□ 2.12
CPNE1-203ENST00000397442 LATS1O95835 1130 aa28.29■■■□□ 2.12
CPNE1-203ENST00000397442 GAS8O95995 478 aa28.29■■■□□ 2.12
CPNE1-203ENST00000397442 RHOQP17081 205 aa28.29■■■□□ 2.12
CPNE1-203ENST00000397442 ATP5OP48047 213 aa28.29■■■□□ 2.12
CPNE1-203ENST00000397442 PTK6Q13882 451 aa28.29■■■□□ 2.12
CPNE1-203ENST00000397442 RARS2Q5T160 578 aaKnown RBP28.29■■■□□ 2.12
CPNE1-203ENST00000397442 SYDE1Q6ZW31 735 aaPredicted RBP28.29■■■□□ 2.12
CPNE1-203ENST00000397442 PRUNE1Q86TP1 453 aa28.29■■■□□ 2.12
CPNE1-203ENST00000397442 LGI2Q8N0V4 545 aa28.29■■■□□ 2.12
CPNE1-203ENST00000397442 ITFG1Q8TB96 612 aa28.29■■■□□ 2.12
CPNE1-203ENST00000397442 USP29Q9HBJ7 922 aa28.29■■■□□ 2.12
CPNE1-203ENST00000397442 UTP11Q9Y3A2 253 aaKnown RBP28.29■■■□□ 2.12
CPNE1-203ENST00000397442 TRIOBPQ9H2D6 2365 aa28.29■■■□□ 2.12
CPNE1-203ENST00000397442 BCLAF3A2AJT9 711 aaKnown RBP28.29■■■□□ 2.12
CPNE1-203ENST00000397442 F5H5T6 163 aa28.29■■■□□ 2.12
CPNE1-203ENST00000397442 PPP1R7Q15435 360 aa28.29■■■□□ 2.12
CPNE1-203ENST00000397442 DARS2Q6PI48 645 aaKnown RBP28.29■■■□□ 2.12
CPNE1-203ENST00000397442 SYCE2Q6PIF2 218 aa28.29■■■□□ 2.12
CPNE1-203ENST00000397442 BZW1Q7L1Q6 419 aaKnown RBP28.29■■■□□ 2.12
CPNE1-203ENST00000397442 CASKIN2Q8WXE0 1202 aa28.29■■■□□ 2.12
CPNE1-203ENST00000397442 ZSWIM3Q96MP5 696 aa28.29■■■□□ 2.12
CPNE1-203ENST00000397442 PRICKLE1Q96MT3 831 aaPredicted RBP28.29■■■□□ 2.12
CPNE1-203ENST00000397442 RPRD1AQ96P16 312 aaPredicted RBP28.29■■■□□ 2.12
CPNE1-203ENST00000397442 QKIQ96PU8 341 aaKnown RBP eCLIP28.29■■■□□ 2.126e-7■■■□□ 15.2
CPNE1-203ENST00000397442 RAB17Q9H0T7 212 aa28.29■■■□□ 2.12
CPNE1-203ENST00000397442 CFAP97Q9P2B7 532 aa28.29■■■□□ 2.12
CPNE1-203ENST00000397442 CCL26Q9Y258 94 aa28.29■■■□□ 2.12
CPNE1-203ENST00000397442 MRPS23Q9Y3D9 190 aaKnown RBP28.29■■■□□ 2.12
CPNE1-203ENST00000397442 RAD54BQ9Y620 910 aa28.29■■■□□ 2.12
CPNE1-203ENST00000397442 SGK1O00141 431 aa28.28■■■□□ 2.12
CPNE1-203ENST00000397442 SCAMP3O14828 347 aaKnown RBP28.28■■■□□ 2.12
CPNE1-203ENST00000397442 SERPINB6P35237 376 aa28.28■■■□□ 2.12
CPNE1-203ENST00000397442 GRIN2CQ14957 1233 aa28.28■■■□□ 2.12
CPNE1-203ENST00000397442 SLC45A4Q5BKX6 768 aa28.28■■■□□ 2.12
CPNE1-203ENST00000397442 ANKRD54Q6NXT1 300 aa28.28■■■□□ 2.12
CPNE1-203ENST00000397442 HTR3DQ70Z44 454 aa28.28■■■□□ 2.12
CPNE1-203ENST00000397442 GSTA5Q7RTV2 222 aa28.28■■■□□ 2.12
CPNE1-203ENST00000397442 ARHGAP12Q8IWW6 846 aa28.28■■■□□ 2.12
CPNE1-203ENST00000397442 ING5Q8WYH8 240 aa28.28■■■□□ 2.12
CPNE1-203ENST00000397442 TMEM248Q9NWD8 314 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms