RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 NAT8LQ8N9F0 302 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 PHOSPHO2Q8TCD6 241 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 OVCA2Q8WZ82 227 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 DPF3Q92784 378 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 CLP1Q92989 425 aaKnown RBP8.89□□□□□ -0.99
TDP1-203ENST00000393454 ARL8AQ96BM9 186 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 BTN2A3PQ96KV6 586 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 C1orf74Q96LT6 269 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 SH3GL2Q99962 352 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 CEP41Q9BYV8 373 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 EPB41L4BQ9H329 900 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 ETNK1Q9HBU6 452 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 RXFP1Q9HBX9 757 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 MPP6Q9NZW5 540 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 VANGL2Q9ULK5 521 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 INSL5Q9Y5Q6 135 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 NFS1Q9Y697 457 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 SHROOM3Q8TF72 1996 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 A0A0A0MRY4 1105 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 TLDC2A0PJX2 215 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 SMIM23A6NLE4 172 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 RNF103O00237 685 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 TTC4O95801 387 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 SHBGP04278 402 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 APRTP07741 180 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 LINC00271P0C7V0 271 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 HTR7P34969 479 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 BMPR1AP36894 532 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 COG7P83436 770 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 MTM1Q13496 603 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 AUHQ13825 339 aaKnown RBP8.89□□□□□ -0.99
TDP1-203ENST00000393454 MS4A13Q5J8X5 152 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 ANKRD20A2Q5SQ80 823 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 ANKRD20A1Q5TYW2 823 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 ANKRD20A3Q5VUR7 823 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 RAP1GAP2Q684P5 730 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 KCTD16Q68DU8 428 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 GPR65Q8IYL9 337 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 ZBED8Q8IZ13 594 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 MICAL1Q8TDZ2 1067 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 DEPDC1BQ8WUY9 529 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 SPATA13Q96N96 652 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 TCF25Q9BQ70 676 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 NINJ2Q9NZG7 142 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 UXTQ9UBK9 157 aaPredicted RBP8.89□□□□□ -0.99
TDP1-203ENST00000393454 MAFFQ9ULX9 164 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 PLXNA4Q9HCM2 1894 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 GOLGA6CA6NDK9 693 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 KCNK1O00180 336 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 SMAPO00193 183 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 CHADO15335 359 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 TGM5O43548 720 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 LPXNO60711 386 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 BANF1O75531 89 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 TMEM63AO94886 807 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 METTL18O95568 372 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 LRG1P02750 347 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 ADH1AP07327 375 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 NUDT17P0C025 328 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 GOLGA6DP0CG33 693 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 GARSP41250 739 aaKnown RBP8.88□□□□□ -0.99
TDP1-203ENST00000393454 KCNQ1P51787 676 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 GYS2P54840 703 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 ERVFC1P60507 584 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 RING1Q06587 406 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 KCNJ11Q14654 390 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 BBS9Q3SYG4 887 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 TTMPQ5BVD1 217 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 FNBP1LQ5T0N5 605 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 MANEALQ5VSG8 457 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 PLPP4Q5VZY2 271 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 NUGGCQ68CJ6 796 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 PPP1R21Q6ZMI0 780 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 CAPN12Q6ZSI9 719 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 ITIH5Q86UX2 942 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 CHSY1Q86X52 802 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 ANKMY2Q8IV38 441 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 PDIK1LQ8N165 341 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 SP7Q8TDD2 431 aaPredicted RBP8.88□□□□□ -0.99
TDP1-203ENST00000393454 MYRFLQ96LU7 910 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 KLHL5Q96PQ7 755 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 EMILIN2Q9BXX0 1053 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 BRD8Q9H0E9 1235 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 TMBIM4Q9HC24 238 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 TRPC7Q9HCX4 862 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 GOLGA6AQ9NYA3 693 aa8.88□□□□□ -0.99
TDP1-203ENST00000393454 KLHL8Q9P2G9 620 aaPredicted RBP8.88□□□□□ -0.99
TDP1-203ENST00000393454 HBS1LQ9Y450 684 aaKnown RBP8.88□□□□□ -0.99
TDP1-203ENST00000393454 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.88□□□□□ -0.99
TDP1-203ENST00000393454 MYO18AQ92614 2054 aaKnown RBP8.88□□□□□ -0.99
TDP1-203ENST00000393454 GOLGA6L7A0A1B0GV03 622 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 COCHO43405 550 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 OPHN1O60890 802 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 ZNF189O75820 626 aaPredicted RBP8.87□□□□□ -0.99
TDP1-203ENST00000393454 IRF1P10914 325 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 HOXC13P31276 330 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 FDFT1P37268 417 aa8.87□□□□□ -0.99
TDP1-203ENST00000393454 HARS2P49590 506 aaKnown RBP8.87□□□□□ -0.99
TDP1-203ENST00000393454 NRG1Q02297 640 aaPredicted RBP8.87□□□□□ -0.99
TDP1-203ENST00000393454 PPIDQ08752 370 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms