RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 LZTR1Q8N653 840 aa15.91■□□□□ 0.14
LIMS1-202ENST00000338045 NETO2Q8NC67 525 aa15.91■□□□□ 0.14
LIMS1-202ENST00000338045 PSMG2Q969U7 264 aa15.91■□□□□ 0.14
LIMS1-202ENST00000338045 NINJ2Q9NZG7 142 aa15.91■□□□□ 0.14
LIMS1-202ENST00000338045 TRPM5Q9NZQ8 1165 aa15.91■□□□□ 0.14
LIMS1-202ENST00000338045 SLC12A6Q9UHW9 1150 aa15.91■□□□□ 0.14
LIMS1-202ENST00000338045 IGLV3-10A0A075B6K4 115 aa15.91■□□□□ 0.14
LIMS1-202ENST00000338045 E7ESA3 106 aa15.91■□□□□ 0.14
LIMS1-202ENST00000338045 ALOX15BO15296 676 aa15.91■□□□□ 0.14
LIMS1-202ENST00000338045 EIF3HO15372 352 aaKnown RBP eCLIP15.91■□□□□ 0.14
LIMS1-202ENST00000338045 OPHN1O60890 802 aa15.91■□□□□ 0.14
LIMS1-202ENST00000338045 GARSP41250 739 aaKnown RBP15.91■□□□□ 0.14
LIMS1-202ENST00000338045 MAGEA4P43358 317 aa15.91■□□□□ 0.14
LIMS1-202ENST00000338045 GAD2Q05329 585 aa15.91■□□□□ 0.14
LIMS1-202ENST00000338045 ZNF33AQ06730 810 aa15.91■□□□□ 0.14
LIMS1-202ENST00000338045 AP1B1Q10567 949 aa15.91■□□□□ 0.14
LIMS1-202ENST00000338045 WASHC5Q12768 1159 aa15.91■□□□□ 0.14
LIMS1-202ENST00000338045 HIF1AQ16665 826 aa15.91■□□□□ 0.14
LIMS1-202ENST00000338045 HECTD3Q5T447 861 aa15.91■□□□□ 0.14
LIMS1-202ENST00000338045 LILRA6Q6PI73 481 aa15.91■□□□□ 0.14
LIMS1-202ENST00000338045 DNAJB7Q7Z6W7 309 aaPredicted RBP15.91■□□□□ 0.14
LIMS1-202ENST00000338045 GOLGA6L1Q8N7Z2 621 aa15.91■□□□□ 0.14
LIMS1-202ENST00000338045 DPF3Q92784 378 aa15.91■□□□□ 0.14
LIMS1-202ENST00000338045 FERMT1Q9BQL6 677 aa15.91■□□□□ 0.14
LIMS1-202ENST00000338045 TMEM109Q9BVC6 243 aa15.91■□□□□ 0.14
LIMS1-202ENST00000338045 MTIF3Q9H2K0 278 aaKnown RBP15.91■□□□□ 0.14
LIMS1-202ENST00000338045 ETNK1Q9HBU6 452 aa15.91■□□□□ 0.14
LIMS1-202ENST00000338045 PPARGC1AQ9UBK2 798 aaKnown RBP15.91■□□□□ 0.14
LIMS1-202ENST00000338045 LAMA2P24043 3122 aaKnown RBP15.9■□□□□ 0.14
LIMS1-202ENST00000338045 PLXNA4Q9HCM2 1894 aa15.9■□□□□ 0.14
LIMS1-202ENST00000338045 TGM5O43548 720 aa15.9■□□□□ 0.14
LIMS1-202ENST00000338045 METTL18O95568 372 aa15.9■□□□□ 0.14
LIMS1-202ENST00000338045 CXCL14O95715 111 aa15.9■□□□□ 0.14
LIMS1-202ENST00000338045 SHBGP04278 402 aa15.9■□□□□ 0.14
LIMS1-202ENST00000338045 EPHB3P54753 998 aa15.9■□□□□ 0.14
LIMS1-202ENST00000338045 AUHQ13825 339 aaKnown RBP15.9■□□□□ 0.14
LIMS1-202ENST00000338045 ANKRD20A2Q5SQ80 823 aa15.9■□□□□ 0.14
LIMS1-202ENST00000338045 ANKRD20A1Q5TYW2 823 aa15.9■□□□□ 0.14
LIMS1-202ENST00000338045 ANKRD20A3Q5VUR7 823 aa15.9■□□□□ 0.14
LIMS1-202ENST00000338045 NUGGCQ68CJ6 796 aa15.9■□□□□ 0.14
LIMS1-202ENST00000338045 CENPUQ71F23 418 aa15.9■□□□□ 0.14
LIMS1-202ENST00000338045 NLRP14Q86W24 1093 aa15.9■□□□□ 0.14
LIMS1-202ENST00000338045 ARHGAP12Q8IWW6 846 aa15.9■□□□□ 0.14
LIMS1-202ENST00000338045 TAB3Q8N5C8 712 aaPredicted RBP15.9■□□□□ 0.14
LIMS1-202ENST00000338045 RTL3Q8N8U3 475 aaKnown RBP15.9■□□□□ 0.14
LIMS1-202ENST00000338045 CCNYQ8ND76 341 aa15.9■□□□□ 0.14
LIMS1-202ENST00000338045 ARL8AQ96BM9 186 aa15.9■□□□□ 0.14
LIMS1-202ENST00000338045 PRMT1Q99873 361 aaKnown RBP15.9■□□□□ 0.14
LIMS1-202ENST00000338045 HTATIP2Q9BUP3 242 aa15.9■□□□□ 0.14
LIMS1-202ENST00000338045 TMBIM4Q9HC24 238 aa15.9■□□□□ 0.14
LIMS1-202ENST00000338045 SAYSD1Q9NPB0 183 aa15.9■□□□□ 0.14
LIMS1-202ENST00000338045 UXTQ9UBK9 157 aaPredicted RBP15.9■□□□□ 0.14
LIMS1-202ENST00000338045 NR2E3Q9Y5X4 410 aa15.9■□□□□ 0.14
LIMS1-202ENST00000338045 RNF103O00237 685 aa15.89■□□□□ 0.13
LIMS1-202ENST00000338045 MTSS1O43312 755 aa15.89■□□□□ 0.13
LIMS1-202ENST00000338045 COCHO43405 550 aa15.89■□□□□ 0.13
LIMS1-202ENST00000338045 STK10O94804 968 aaKnown RBP15.89■□□□□ 0.13
LIMS1-202ENST00000338045 ARL4CP56559 192 aa15.89■□□□□ 0.13
LIMS1-202ENST00000338045 PLD1Q13393 1074 aa15.89■□□□□ 0.13
LIMS1-202ENST00000338045 SEMA5AQ13591 1074 aa15.89■□□□□ 0.13
LIMS1-202ENST00000338045 KYNUQ16719 465 aa15.89■□□□□ 0.13
LIMS1-202ENST00000338045 TTMPQ5BVD1 217 aa15.89■□□□□ 0.13
LIMS1-202ENST00000338045 FAM182AQ5T1J6 154 aa15.89■□□□□ 0.13
LIMS1-202ENST00000338045 AFMIDQ63HM1 303 aa15.89■□□□□ 0.13
LIMS1-202ENST00000338045 TMC7Q7Z402 723 aa15.89■□□□□ 0.13
LIMS1-202ENST00000338045 KLHL5Q96PQ7 755 aa15.89■□□□□ 0.13
LIMS1-202ENST00000338045 FRMD8Q9BZ67 464 aaPredicted RBP15.89■□□□□ 0.13
LIMS1-202ENST00000338045 ZMYND8Q9ULU4 1186 aaPredicted RBP15.89■□□□□ 0.13
LIMS1-202ENST00000338045 RWDD3Q9Y3V2 267 aa15.89■□□□□ 0.13
LIMS1-202ENST00000338045 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.88■□□□□ 0.13
LIMS1-202ENST00000338045 GOLGA8MH3BSY2 632 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 ACSL3O95573 720 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 OAS1P00973 400 aaKnown RBP15.88■□□□□ 0.13
LIMS1-202ENST00000338045 ADH1AP07327 375 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 ABHD2P08910 425 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 CTNNB1P35222 781 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 TAF12Q16514 161 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 FNBP1LQ5T0N5 605 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 PPP1R21Q6ZMI0 780 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 ARHGEF18Q6ZSZ5 1173 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 TMEM150AQ86TG1 271 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 ITIH5Q86UX2 942 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 MCUQ8NE86 351 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 EXOC4Q96A65 974 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 C9orf72Q96LT7 481 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 TTC25Q96NG3 672 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 TSGA13Q96PP4 275 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 VANGL2Q9ULK5 521 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 ASB3Q9Y575 518 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 LINC01553A4QN01 128 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 DRGXA6NNA5 263 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 C5orf67F2Z3F1 127 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 HMBSP08397 361 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 MYZAPP0CAP1 466 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 RHOQP17081 205 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 TPSB2P20231 275 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 PTPN3P26045 913 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 FDFT1P37268 417 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 ERVFC1P60507 584 aa15.88■□□□□ 0.13
LIMS1-202ENST00000338045 COG7P83436 770 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms