RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 LLGL1Q15334 1064 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 LONRF1Q17RB8 773 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 SLC39A12Q504Y0 691 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 DNAJC21Q5F1R6 531 aaKnown RBP7.38□□□□□ -1.23
NPHP1-201ENST00000316534 RTP2Q5QGT7 225 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 NUGGCQ68CJ6 796 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 KCTD16Q68DU8 428 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 SLC39A11Q8N1S5 342 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 FBXO36Q8NEA4 188 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 CKAP2Q8WWK9 683 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 ZNF419Q96HQ0 510 aaPredicted RBP7.38□□□□□ -1.23
NPHP1-201ENST00000316534 PPP1R2P1Q96PQ5 205 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 EBNA1BP2Q99848 306 aaKnown RBP7.38□□□□□ -1.23
NPHP1-201ENST00000316534 UBE2OQ9C0C9 1292 aaKnown RBP7.38□□□□□ -1.23
NPHP1-201ENST00000316534 PSMC3IPQ9P2W1 217 aaPredicted RBP7.38□□□□□ -1.23
NPHP1-201ENST00000316534 CENPFP49454 3210 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 AP2A1O95782 977 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 LATS1O95835 1130 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 ALDH2P05091 517 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 RABGGTBP53611 331 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 NRLP54845 237 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 GNGT1P63211 74 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 PDIA2Q13087 525 aaKnown RBP7.38□□□□□ -1.23
NPHP1-201ENST00000316534 TPGS2Q68CL5 300 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 TMEM173Q86WV6 379 aaPredicted RBP7.38□□□□□ -1.23
NPHP1-201ENST00000316534 CCDC13Q8IYE1 715 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 DNAJC5GQ8N7S2 189 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 TTC17Q96AE7 1141 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 CDK5RAP1Q96SZ6 601 aaKnown RBP7.38□□□□□ -1.23
NPHP1-201ENST00000316534 TKTL2Q9H0I9 626 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 WDCPQ9H6R7 721 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 ARNT2Q9HBZ2 717 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.38□□□□□ -1.23
NPHP1-201ENST00000316534 PRKAG3Q9UGI9 489 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 HS3ST4Q9Y661 456 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 A0A1W2PQH9 124 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 TCRBV9S1A1TA0A576 114 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 HMGA1P17096 107 aaKnown RBP7.38□□□□□ -1.23
NPHP1-201ENST00000316534 PHBP35232 272 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 ETV4P43268 484 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 GUCY1A3Q02108 690 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 DBN1Q16643 649 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 PIK3R6Q5UE93 754 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 SCYL2Q6P3W7 929 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 RNF19BQ6ZMZ0 732 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 TAS1R1Q7RTX1 841 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 TMEM135Q86UB9 458 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 RTL3Q8N8U3 475 aaKnown RBP7.38□□□□□ -1.23
NPHP1-201ENST00000316534 BANPQ8N9N5 519 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 IGSF21Q96ID5 467 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 TEKT5Q96M29 485 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 MLPHQ9BV36 600 aaPredicted RBP7.38□□□□□ -1.23
NPHP1-201ENST00000316534 HIPK3Q9H422 1215 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 PDFQ9HBH1 243 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 OR12D3Q9UGF7 316 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 HBS1LQ9Y450 684 aaKnown RBP7.38□□□□□ -1.23
NPHP1-201ENST00000316534 BRCA2P51587 3418 aa7.38□□□□□ -1.23
NPHP1-201ENST00000316534 HMX2A2RU54 273 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 H3BNC9 293 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 GREM1O60565 184 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 TIMP1P01033 207 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 SOD2P04179 222 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 SLC2A3P11169 496 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 CHN1P15882 459 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 MX2P20592 715 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 CCR1P32246 355 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 STX2P32856 288 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 ELK3P41970 407 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 GATMP50440 423 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 PKN2Q16513 984 aaKnown RBP7.37□□□□□ -1.23
NPHP1-201ENST00000316534 ODF2Q5BJF6 829 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 FOXR1Q6PIV2 292 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 PAXIP1Q6ZW49 1069 aaPredicted RBP7.37□□□□□ -1.23
NPHP1-201ENST00000316534 PDZD4Q76G19 769 aaPredicted RBP7.37□□□□□ -1.23
NPHP1-201ENST00000316534 CTU1Q7Z7A3 348 aaKnown RBP7.37□□□□□ -1.23
NPHP1-201ENST00000316534 GALNT7Q86SF2 657 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 DDX53Q86TM3 631 aaKnown RBP7.37□□□□□ -1.23
NPHP1-201ENST00000316534 CNTN4Q8IWV2 1026 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 PDIK1LQ8N165 341 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.37□□□□□ -1.23
NPHP1-201ENST00000316534 SGSM3Q96HU1 749 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 C9orf72Q96LT7 481 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 FCRL5Q96RD9 977 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 RANBP9Q96S59 729 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 EPAS1Q99814 870 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 NAT9Q9BTE0 207 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 TTPALQ9BTX7 342 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 PRDM12Q9H4Q4 367 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 SMYD2Q9NRG4 433 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 DDIT4Q9NX09 232 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 SMG5Q9UPR3 1016 aaKnown RBP7.37□□□□□ -1.23
NPHP1-201ENST00000316534 GMNCA6NCL1 334 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 AP3B1O00203 1094 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 PSMD3O43242 534 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 ACSL3O95573 720 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 POU2F2P09086 479 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 SERPINB6P35237 376 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 PPP3CCP48454 512 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 DNAJC3Q13217 504 aa7.37□□□□□ -1.23
NPHP1-201ENST00000316534 TEX44Q53QW1 395 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms