RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 LILRA6Q6PI73 481 aa16.84■□□□□ 0.29
TPM1-201ENST00000267996 MIB1Q86YT6 1006 aa16.84■□□□□ 0.29
TPM1-201ENST00000267996 DPF3Q92784 378 aa16.84■□□□□ 0.29
TPM1-201ENST00000267996 PSMG2Q969U7 264 aa16.84■□□□□ 0.29
TPM1-201ENST00000267996 ARL8AQ96BM9 186 aa16.84■□□□□ 0.29
TPM1-201ENST00000267996 ZNF512Q96ME7 567 aaPredicted RBP16.84■□□□□ 0.29
TPM1-201ENST00000267996 TMBIM4Q9HC24 238 aa16.84■□□□□ 0.29
TPM1-201ENST00000267996 TRPM5Q9NZQ8 1165 aa16.84■□□□□ 0.29
TPM1-201ENST00000267996 PPARGC1AQ9UBK2 798 aaKnown RBP16.84■□□□□ 0.29
TPM1-201ENST00000267996 IRAK3Q9Y616 596 aa16.84■□□□□ 0.29
TPM1-201ENST00000267996 NUP205Q92621 2012 aa16.83■□□□□ 0.29
TPM1-201ENST00000267996 OPHN1O60890 802 aa16.83■□□□□ 0.28
TPM1-201ENST00000267996 METTL18O95568 372 aa16.83■□□□□ 0.28
TPM1-201ENST00000267996 CXCL14O95715 111 aa16.83■□□□□ 0.28
TPM1-201ENST00000267996 SHBGP04278 402 aa16.83■□□□□ 0.28
TPM1-201ENST00000267996 GARSP41250 739 aaKnown RBP16.83■□□□□ 0.28
TPM1-201ENST00000267996 EPHB3P54753 998 aa16.83■□□□□ 0.28
TPM1-201ENST00000267996 GAD2Q05329 585 aa16.83■□□□□ 0.28
TPM1-201ENST00000267996 AP1B1Q10567 949 aa16.83■□□□□ 0.28
TPM1-201ENST00000267996 HIF1AQ16665 826 aa16.83■□□□□ 0.28
TPM1-201ENST00000267996 KYNUQ16719 465 aa16.83■□□□□ 0.28
TPM1-201ENST00000267996 ANKRD20A2Q5SQ80 823 aa16.83■□□□□ 0.28
TPM1-201ENST00000267996 ANKRD20A1Q5TYW2 823 aa16.83■□□□□ 0.28
TPM1-201ENST00000267996 ANKRD20A3Q5VUR7 823 aa16.83■□□□□ 0.28
TPM1-201ENST00000267996 AFMIDQ63HM1 303 aa16.83■□□□□ 0.28
TPM1-201ENST00000267996 CENPUQ71F23 418 aa16.83■□□□□ 0.28
TPM1-201ENST00000267996 DNAJB7Q7Z6W7 309 aaPredicted RBP16.83■□□□□ 0.28
TPM1-201ENST00000267996 ARHGAP12Q8IWW6 846 aa16.83■□□□□ 0.28
TPM1-201ENST00000267996 GOLGA6L1Q8N7Z2 621 aa16.83■□□□□ 0.28
TPM1-201ENST00000267996 RTL3Q8N8U3 475 aaKnown RBP16.83■□□□□ 0.28
TPM1-201ENST00000267996 PRMT1Q99873 361 aaKnown RBP16.83■□□□□ 0.28
TPM1-201ENST00000267996 FERMT1Q9BQL6 677 aa16.83■□□□□ 0.28
TPM1-201ENST00000267996 MTIF3Q9H2K0 278 aaKnown RBP16.83■□□□□ 0.28
TPM1-201ENST00000267996 ETNK1Q9HBU6 452 aa16.83■□□□□ 0.28
TPM1-201ENST00000267996 SAYSD1Q9NPB0 183 aa16.83■□□□□ 0.28
TPM1-201ENST00000267996 RNF103O00237 685 aa16.82■□□□□ 0.28
TPM1-201ENST00000267996 MTSS1O43312 755 aa16.82■□□□□ 0.28
TPM1-201ENST00000267996 TGM5O43548 720 aa16.82■□□□□ 0.28
TPM1-201ENST00000267996 STK10O94804 968 aaKnown RBP16.82■□□□□ 0.28
TPM1-201ENST00000267996 ARL4CP56559 192 aa16.82■□□□□ 0.28
TPM1-201ENST00000267996 PLD1Q13393 1074 aa16.82■□□□□ 0.28
TPM1-201ENST00000267996 SEMA5AQ13591 1074 aa16.82■□□□□ 0.28
TPM1-201ENST00000267996 AUHQ13825 339 aaKnown RBP16.82■□□□□ 0.28
TPM1-201ENST00000267996 TTMPQ5BVD1 217 aa16.82■□□□□ 0.28
TPM1-201ENST00000267996 NUGGCQ68CJ6 796 aa16.82■□□□□ 0.28
TPM1-201ENST00000267996 NLRP14Q86W24 1093 aa16.82■□□□□ 0.28
TPM1-201ENST00000267996 TAB3Q8N5C8 712 aaPredicted RBP16.82■□□□□ 0.28
TPM1-201ENST00000267996 CCNYQ8ND76 341 aa16.82■□□□□ 0.28
TPM1-201ENST00000267996 MCUQ8NE86 351 aa16.82■□□□□ 0.28
TPM1-201ENST00000267996 TSGA13Q96PP4 275 aa16.82■□□□□ 0.28
TPM1-201ENST00000267996 KLHL5Q96PQ7 755 aa16.82■□□□□ 0.28
TPM1-201ENST00000267996 HTATIP2Q9BUP3 242 aa16.82■□□□□ 0.28
TPM1-201ENST00000267996 FRMD8Q9BZ67 464 aaPredicted RBP16.82■□□□□ 0.28
TPM1-201ENST00000267996 UXTQ9UBK9 157 aaPredicted RBP16.82■□□□□ 0.28
TPM1-201ENST00000267996 ZMYND8Q9ULU4 1186 aaPredicted RBP16.82■□□□□ 0.28
TPM1-201ENST00000267996 ASB3Q9Y575 518 aa16.82■□□□□ 0.28
TPM1-201ENST00000267996 NR2E3Q9Y5X4 410 aa16.82■□□□□ 0.28
TPM1-201ENST00000267996 DOCK4Q8N1I0 1966 aa16.82■□□□□ 0.28
TPM1-201ENST00000267996 DRGXA6NNA5 263 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 COCHO43405 550 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 ABHD2P08910 425 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 RHOQP17081 205 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 TPSB2P20231 275 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 FDFT1P37268 417 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 COG7P83436 770 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 TPSAB1Q15661 275 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 TAF12Q16514 161 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 FNBP1LQ5T0N5 605 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 FAM182AQ5T1J6 154 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 PPP1R21Q6ZMI0 780 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 ARHGEF18Q6ZSZ5 1173 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 TMC7Q7Z402 723 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 TMEM150AQ86TG1 271 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 EXOC4Q96A65 974 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 TTC25Q96NG3 672 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 RWDD3Q9Y3V2 267 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 ANAPC1Q9H1A4 1944 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.81■□□□□ 0.28
TPM1-201ENST00000267996 LINC01553A4QN01 128 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 GOLGA8MH3BSY2 632 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 POLR3GO15318 223 aaPredicted RBP16.81■□□□□ 0.28
TPM1-201ENST00000267996 ACSL3O95573 720 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 OAS1P00973 400 aaKnown RBP16.81■□□□□ 0.28
TPM1-201ENST00000267996 F11P03951 625 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 ADH1AP07327 375 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 MYZAPP0CAP1 466 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 CTNNB1P35222 781 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 ERVFC1P60507 584 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 IFFO1Q0D2I5 559 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 MSS51Q4VC12 460 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 LRRC31Q6UY01 552 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 CROCCP2Q86T23 111 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 ITIH5Q86UX2 942 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 PDIK1LQ8N165 341 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 ZNF567Q8N184 647 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 ZSCAN18Q8TBC5 510 aaPredicted RBP16.81■□□□□ 0.28
TPM1-201ENST00000267996 SPPL3Q8TCT6 385 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 C9orf72Q96LT7 481 aa16.81■□□□□ 0.28
TPM1-201ENST00000267996 LBHD1Q9BQE6 289 aaPredicted RBP16.81■□□□□ 0.28
TPM1-201ENST00000267996 ZYG11BQ9C0D3 744 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms