RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 SLC13A1Q9BZW2 595 aa8.2□□□□□ -1.1
HMGXB4-201ENST00000216106 SIK2Q9H0K1 926 aa8.2□□□□□ -1.1
HMGXB4-201ENST00000216106 EIF2B3Q9NR50 452 aaKnown RBP8.2□□□□□ -1.1
HMGXB4-201ENST00000216106 SYBUQ9NX95 663 aa8.2□□□□□ -1.1
HMGXB4-201ENST00000216106 HMX2A2RU54 273 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 SDR42E2A6NKP2 422 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 SKIP12755 728 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 MLNP12872 115 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 GRIK1P39086 918 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 FAM26DQ5JW98 314 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 DCLRE1AQ6PJP8 1040 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 CES3Q6UWW8 571 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 PDZD4Q76G19 769 aaPredicted RBP8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 SMC1BQ8NDV3 1235 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 IRGQQ8WZA9 623 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 GLT1D1Q96MS3 346 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 GORASP1Q9BQQ3 440 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 MANSC1Q9H8J5 431 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 NPHS2Q9NP85 383 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 PCMTD2Q9NV79 361 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 MOCS1Q9NZB8 636 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 IGSF9Q9P2J2 1179 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 NUDT5Q9UKK9 219 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 COL4A4P53420 1690 aaPredicted RBP8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 MSI1O43347 362 aaKnown RBP8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 RFPL1O75677 317 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 RASSF9O75901 435 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 KRT38O76015 456 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 NEFHP12036 1026 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 PPIDQ08752 370 aaKnown RBP8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 ZBTB17Q13105 803 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 CRYMQ14894 314 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 GALNTL6Q49A17 601 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 SLC39A12Q504Y0 691 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 CLLU1OSQ5K130 101 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 LGSNQ5TDP6 509 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 RWDD4Q6NW29 188 aaKnown RBP8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 GLB1LQ6UWU2 654 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 OR52K1Q8NGK4 314 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 LINC01599Q8WXQ3 324 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 VPS11Q9H270 941 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 ECT2Q9H8V3 914 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 ABI2Q9NYB9 513 aaPredicted RBP8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 SFMBT1Q9UHJ3 866 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 MAGED2Q9UNF1 606 aaPredicted RBP8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 PRG3Q9Y2Y8 225 aaPredicted RBP8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 ZBTB24O43167 697 aaPredicted RBP8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 TOP3BO95985 862 aaKnown RBP8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 DHRS4L1P0CG22 281 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 BGNP21810 368 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 HNRNPH1P31943 449 aaKnown RBP8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 GARSP41250 739 aaKnown RBP8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 HCAR3P49019 387 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 NCALDP61601 193 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 MAPRE1Q15691 268 aaKnown RBP8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 SCN4BQ8IWT1 228 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 GBP7Q8N8V2 638 aaPredicted RBP8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 CD99L2Q8TCZ2 262 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 MECRQ9BV79 373 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 SERPINB6P35237 376 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 OR1G1P47890 313 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 SDHAF4Q5VUM1 108 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 STEAP4Q687X5 459 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 TBC1D1Q86TI0 1168 aaPredicted RBP8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 C10orf82Q8WW14 230 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 HDAC11Q96DB2 347 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 ERP27Q96DN0 273 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 RGS18Q9NS28 235 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 DNAJB4Q9UDY4 337 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 SRRDQ9UH36 339 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 DCTN4Q9UJW0 460 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 CHKBQ9Y259 395 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 USH1CQ9Y6N9 552 aa8.19□□□□□ -1.1
HMGXB4-201ENST00000216106 NCAM2O15394 837 aa8.18□□□□□ -1.1
HMGXB4-201ENST00000216106 PGAM1P18669 254 aa8.18□□□□□ -1.1
HMGXB4-201ENST00000216106 CD68P34810 354 aaPredicted RBP8.18□□□□□ -1.1
HMGXB4-201ENST00000216106 SERPINB4P48594 390 aa8.18□□□□□ -1.1
HMGXB4-201ENST00000216106 GALNT2Q10471 571 aa8.18□□□□□ -1.1
HMGXB4-201ENST00000216106 BNIP1Q12981 228 aa8.18□□□□□ -1.1
HMGXB4-201ENST00000216106 MAP3K21Q5TCX8 1036 aa8.18□□□□□ -1.1
HMGXB4-201ENST00000216106 FYB2Q5VWT5 728 aa8.18□□□□□ -1.1
HMGXB4-201ENST00000216106 BTBD8Q5XKL5 378 aa8.18□□□□□ -1.1
HMGXB4-201ENST00000216106 C4orf50Q6ZRC1 276 aa8.18□□□□□ -1.1
HMGXB4-201ENST00000216106 SLC24A5Q71RS6 500 aa8.18□□□□□ -1.1
HMGXB4-201ENST00000216106 MYLK2Q9H1R3 596 aa8.18□□□□□ -1.1
HMGXB4-201ENST00000216106 KLC4Q9NSK0 619 aa8.18□□□□□ -1.1
HMGXB4-201ENST00000216106 UBP1Q9NZI7 540 aa8.18□□□□□ -1.1
HMGXB4-201ENST00000216106 IRAK2O43187 625 aa8.18□□□□□ -1.1
HMGXB4-201ENST00000216106 CABYRO75952 493 aa8.18□□□□□ -1.1
HMGXB4-201ENST00000216106 ALDH1A2O94788 518 aa8.18□□□□□ -1.1
HMGXB4-201ENST00000216106 IGLV3-25P01717 112 aa8.18□□□□□ -1.1
HMGXB4-201ENST00000216106 NFKB1P19838 968 aa8.18□□□□□ -1.1
HMGXB4-201ENST00000216106 TYMPP19971 482 aa8.18□□□□□ -1.1
HMGXB4-201ENST00000216106 MX2P20592 715 aa8.18□□□□□ -1.1
HMGXB4-201ENST00000216106 NIPAL4Q0D2K0 466 aa8.18□□□□□ -1.1
HMGXB4-201ENST00000216106 NOGQ13253 232 aa8.18□□□□□ -1.1
HMGXB4-201ENST00000216106 PLEKHG4Q58EX7 1191 aa8.18□□□□□ -1.1
HMGXB4-201ENST00000216106 CYB5D1Q6P9G0 228 aa8.18□□□□□ -1.1
HMGXB4-201ENST00000216106 TRAF7Q6Q0C0 670 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms