RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 FAM47CQ5HY64 1035 aa8.12□□□□□ -1.11
VPS11-209ENST00000622309 EFHC2Q5JST6 749 aa8.12□□□□□ -1.11
VPS11-209ENST00000622309 UBE2UQ5VVX9 321 aa8.12□□□□□ -1.11
VPS11-209ENST00000622309 SLC30A10Q6XR72 485 aa8.12□□□□□ -1.11
VPS11-209ENST00000622309 ADGRA1Q86SQ6 560 aa8.12□□□□□ -1.11
VPS11-209ENST00000622309 ZNF354CQ86Y25 554 aa8.12□□□□□ -1.11
VPS11-209ENST00000622309 TICAM1Q8IUC6 712 aa8.12□□□□□ -1.11
VPS11-209ENST00000622309 GALNT13Q8IUC8 556 aa8.12□□□□□ -1.11
VPS11-209ENST00000622309 DTX3Q8N9I9 347 aa8.12□□□□□ -1.11
VPS11-209ENST00000622309 SLAIN1Q8ND83 568 aa8.12□□□□□ -1.11
VPS11-209ENST00000622309 ANGPTL6Q8NI99 470 aa8.12□□□□□ -1.11
VPS11-209ENST00000622309 BRSK1Q8TDC3 778 aa8.12□□□□□ -1.11
VPS11-209ENST00000622309 APOPT1Q96IL0 206 aa8.12□□□□□ -1.11
VPS11-209ENST00000622309 BTBD6Q96KE9 485 aa8.12□□□□□ -1.11
VPS11-209ENST00000622309 PNMA5Q96PV4 448 aa8.12□□□□□ -1.11
VPS11-209ENST00000622309 AGPAT1Q99943 283 aa8.12□□□□□ -1.11
VPS11-209ENST00000622309 PKP2Q99959 881 aa8.12□□□□□ -1.11
VPS11-209ENST00000622309 AIFM2Q9BRQ8 373 aa8.12□□□□□ -1.11
VPS11-209ENST00000622309 TRIT1Q9H3H1 467 aaKnown RBP8.12□□□□□ -1.11
VPS11-209ENST00000622309 OLAHQ9NV23 265 aa8.12□□□□□ -1.11
VPS11-209ENST00000622309 RIMS3Q9UJD0 308 aa8.12□□□□□ -1.11
VPS11-209ENST00000622309 ARHGAP26Q9UNA1 814 aa8.12□□□□□ -1.11
VPS11-209ENST00000622309 IQANK1A0A1B0GTG1 560 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 COPEO14579 308 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 KLF11O14901 512 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 DYNC1LI2O43237 492 aaPredicted RBP8.11□□□□□ -1.11
VPS11-209ENST00000622309 PIP5K1CO60331 668 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 CLPXO76031 633 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 ITGAXP20702 1163 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 GNL1P36915 607 aaPredicted RBP8.11□□□□□ -1.11
VPS11-209ENST00000622309 HPCAL1P37235 193 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 ETFBP38117 255 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 ZNF135P52742 658 aaPredicted RBP8.11□□□□□ -1.11
VPS11-209ENST00000622309 DYNLL1P63167 89 aaKnown RBP8.11□□□□□ -1.11
VPS11-209ENST00000622309 CDK18Q07002 472 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 CHI3L2Q15782 390 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 ZNF598Q86UK7 904 aaKnown RBP8.11□□□□□ -1.11
VPS11-209ENST00000622309 ZC3H7AQ8IWR0 971 aaKnown RBP8.11□□□□□ -1.11
VPS11-209ENST00000622309 CDC26Q8NHZ8 85 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 ETNPPLQ8TBG4 499 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 DCPSQ96C86 337 aaKnown RBP8.11□□□□□ -1.11
VPS11-209ENST00000622309 ZNF347Q96SE7 839 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 FAM118BQ9BPY3 351 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 FAM126AQ9BYI3 521 aaPredicted RBP8.11□□□□□ -1.11
VPS11-209ENST00000622309 CCSER2Q9H7U1 834 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 C12orf10Q9HB07 376 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 FANCEQ9HB96 536 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 PACSIN3Q9UKS6 424 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 TRAF6Q9Y4K3 522 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 ARHGEF35A5YM69 484 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 IFRD1O00458 451 aaPredicted RBP8.11□□□□□ -1.11
VPS11-209ENST00000622309 PIAS1O75925 651 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 PRKACAP17612 351 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 DCKP27707 260 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 POLR2BP30876 1174 aaKnown RBP8.11□□□□□ -1.11
VPS11-209ENST00000622309 PTGS2P35354 604 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 MAPK10P53779 464 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 MRPS5P82675 430 aaKnown RBP8.11□□□□□ -1.11
VPS11-209ENST00000622309 CENPCQ03188 943 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 EVX2Q03828 476 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 NIPAL4Q0D2K0 466 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 NFATC3Q12968 1075 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 HSF5Q4G112 596 aaPredicted RBP8.11□□□□□ -1.11
VPS11-209ENST00000622309 LDLRAP1Q5SW96 308 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 KRT25Q7Z3Z0 450 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 CPNE8Q86YQ8 564 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 CCDC28AQ8IWP9 274 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 FIBCD1Q8N539 461 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 FAM47BQ8NA70 645 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 ZNF564Q8TBZ8 553 aaPredicted RBP8.11□□□□□ -1.11
VPS11-209ENST00000622309 RASSF5Q8WWW0 418 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 PEX13Q92968 403 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 CD101Q93033 1021 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 TRIM63Q969Q1 353 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 ACDQ96AP0 544 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 PSKH2Q96QS6 385 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 CDK5RAP1Q96SZ6 601 aaKnown RBP8.11□□□□□ -1.11
VPS11-209ENST00000622309 EBF4Q9BQW3 602 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 HEMGNQ9BXL5 484 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 MRPL9Q9BYD2 267 aaKnown RBP8.11□□□□□ -1.11
VPS11-209ENST00000622309 FGFBP2Q9BYJ0 223 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 XPNPEP1Q9NQW7 623 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 KCNN3Q9UGI6 736 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 MRPS23Q9Y3D9 190 aaKnown RBP8.11□□□□□ -1.11
VPS11-209ENST00000622309 SDR42E2A6NKP2 422 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 HOXC11O43248 304 aaPredicted RBP8.11□□□□□ -1.11
VPS11-209ENST00000622309 ZW10O43264 779 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 EPN2O95208 641 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 DHRS4L1P0CG22 281 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 NCF2P19878 526 aaPredicted RBP8.11□□□□□ -1.11
VPS11-209ENST00000622309 M6PRP20645 277 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 ECT2LQ008S8 904 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 CACNB1Q02641 598 aaPredicted RBP8.11□□□□□ -1.11
VPS11-209ENST00000622309 TFDP1Q14186 410 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 ADGRD1Q6QNK2 874 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 NEK8Q86SG6 692 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 NUDCD3Q8IVD9 361 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 ASCC1Q8N9N2 400 aaKnown RBP8.11□□□□□ -1.11
VPS11-209ENST00000622309 PDPRQ8NCN5 879 aa8.11□□□□□ -1.11
VPS11-209ENST00000622309 JPH3Q8WXH2 748 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms