RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 P3H4Q92791 437 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 RNF34Q969K3 372 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 DDX50Q9BQ39 737 aaKnown RBP12.12□□□□□ -0.47
PDPN-211ENST00000617617 TMPRSS4Q9NRS4 437 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 ZNF212Q9UDV6 495 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 ARHGAP26Q9UNA1 814 aa12.12□□□□□ -0.47
PDPN-211ENST00000617617 TRAV19A0A0A6YYK7 116 aa12.11□□□□□ -0.47
PDPN-211ENST00000617617 C2orf78A6NCI8 922 aa12.11□□□□□ -0.47
PDPN-211ENST00000617617 ACSL4O60488 711 aa12.11□□□□□ -0.47
PDPN-211ENST00000617617 TTC39BQ5VTQ0 682 aaPredicted RBP12.11□□□□□ -0.47
PDPN-211ENST00000617617 KAZNQ674X7 775 aa12.11□□□□□ -0.47
PDPN-211ENST00000617617 DUPD1Q68J44 220 aa12.11□□□□□ -0.47
PDPN-211ENST00000617617 C4orf22Q6V702 233 aa12.11□□□□□ -0.47
PDPN-211ENST00000617617 HTR3DQ70Z44 454 aa12.11□□□□□ -0.47
PDPN-211ENST00000617617 ADAMTS19Q8TE59 1207 aa12.11□□□□□ -0.47
PDPN-211ENST00000617617 ANKRD7Q92527 254 aa12.11□□□□□ -0.47
PDPN-211ENST00000617617 QKIQ96PU8 341 aaKnown RBP eCLIP12.11□□□□□ -0.47
PDPN-211ENST00000617617 TMEM248Q9NWD8 314 aa12.11□□□□□ -0.47
PDPN-211ENST00000617617 SYNJ2BP-COX16A0A087WUM0 186 aa12.11□□□□□ -0.47
PDPN-211ENST00000617617 E9PAM4 449 aa12.11□□□□□ -0.47
PDPN-211ENST00000617617 CCL16O15467 120 aa12.11□□□□□ -0.47
PDPN-211ENST00000617617 ECEL1O95672 775 aa12.11□□□□□ -0.47
PDPN-211ENST00000617617 PECAM1P16284 738 aaPredicted RBP12.11□□□□□ -0.47
PDPN-211ENST00000617617 RHOQP17081 205 aa12.11□□□□□ -0.47
PDPN-211ENST00000617617 STIP1P31948 543 aaKnown RBP12.11□□□□□ -0.47
PDPN-211ENST00000617617 SERPINB6P35237 376 aa12.11□□□□□ -0.47
PDPN-211ENST00000617617 SLC11A2P49281 568 aa12.11□□□□□ -0.47
PDPN-211ENST00000617617 CUL1Q13616 776 aa12.11□□□□□ -0.47
PDPN-211ENST00000617617 PRKD1Q15139 912 aaPredicted RBP12.11□□□□□ -0.47
PDPN-211ENST00000617617 JAMLQ86YT9 394 aa12.11□□□□□ -0.47
PDPN-211ENST00000617617 HNRNPLLQ8WVV9 542 aaKnown RBP12.11□□□□□ -0.47
PDPN-211ENST00000617617 C1orf54Q8WWF1 131 aa12.11□□□□□ -0.47
PDPN-211ENST00000617617 MAGEB5Q9BZ81 275 aa12.11□□□□□ -0.47
PDPN-211ENST00000617617 TASP1Q9H6P5 420 aa12.11□□□□□ -0.47
PDPN-211ENST00000617617 COX16Q9P0S2 106 aa12.11□□□□□ -0.47
PDPN-211ENST00000617617 AMACRQ9UHK6 382 aa12.11□□□□□ -0.47
PDPN-211ENST00000617617 DNPEPQ9ULA0 475 aa12.11□□□□□ -0.47
PDPN-211ENST00000617617 SHROOM3Q8TF72 1996 aa12.11□□□□□ -0.47
PDPN-211ENST00000617617 KIAA1549LQ6ZVL6 1849 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.1□□□□□ -0.47
PDPN-211ENST00000617617 MCF2LO15068 1137 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 RHOP08100 348 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 SRGAP2BP0DMP2 458 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 ERCC2P18074 760 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 HARS2P49590 506 aaKnown RBP12.1□□□□□ -0.47
PDPN-211ENST00000617617 GALNT2Q10471 571 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 BRD3Q15059 726 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 ARHGAP15Q53QZ3 475 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 NADSYN1Q6IA69 706 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 CDKL3Q8IVW4 592 aaPredicted RBP12.1□□□□□ -0.47
PDPN-211ENST00000617617 KLHL7Q8IXQ5 586 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 IFT20Q8IY31 132 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 CPXM2Q8N436 756 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 RTL3Q8N8U3 475 aaKnown RBP12.1□□□□□ -0.47
PDPN-211ENST00000617617 VN1R2Q8NFZ6 395 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 HAUS1Q96CS2 278 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 ERP44Q9BS26 406 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 NUDT5Q9UKK9 219 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 GAS8O95995 478 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 H2AFXP16104 143 aaPredicted RBP12.1□□□□□ -0.47
PDPN-211ENST00000617617 AMPD1P23109 780 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 MAPKAPK2P49137 400 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 NDST2P52849 883 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 AUHQ13825 339 aaKnown RBP12.1□□□□□ -0.47
PDPN-211ENST00000617617 ELF2Q15723 593 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 FAM133BQ5BKY9 247 aaKnown RBP12.1□□□□□ -0.47
PDPN-211ENST00000617617 TMCO3Q6UWJ1 677 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 CHST9Q7L1S5 443 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 ADAT2Q7Z6V5 191 aaKnown RBP12.1□□□□□ -0.47
PDPN-211ENST00000617617 UMODL1-AS1Q8N2C9 162 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 HDAC11Q96DB2 347 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 TSGA13Q96PP4 275 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 FAM114A2Q9NRY5 505 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 DTLQ9NZJ0 730 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 NUP205Q92621 2012 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 CXorf51AA0A1B0GTR3 108 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 CCR2P41597 374 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 NRIP1P48552 1158 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 EIF3EP60228 445 aaKnown RBP12.1□□□□□ -0.47
PDPN-211ENST00000617617 SLC10A2Q12908 348 aaPredicted RBP12.1□□□□□ -0.47
PDPN-211ENST00000617617 PDK1Q15118 436 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 SLC45A4Q5BKX6 768 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 LRRC31Q6UY01 552 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 MIB1Q86YT6 1006 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 CORO1BQ9BR76 489 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 PARD6BQ9BYG5 372 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 ZYG11BQ9C0D3 744 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 USP29Q9HBJ7 922 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 PCDH9Q9HC56 1237 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 WHRNQ9P202 907 aa12.1□□□□□ -0.47
PDPN-211ENST00000617617 UTP11Q9Y3A2 253 aaKnown RBP12.1□□□□□ -0.47
PDPN-211ENST00000617617 CHD7Q9P2D1 2997 aa12.09□□□□□ -0.47
PDPN-211ENST00000617617 CCDC195A0A1B0GUA6 201 aa12.09□□□□□ -0.47
PDPN-211ENST00000617617 TTI1O43156 1089 aa12.09□□□□□ -0.47
PDPN-211ENST00000617617 HEXIM1O94992 359 aaKnown RBP12.09□□□□□ -0.47
PDPN-211ENST00000617617 HOXB8P17481 243 aaPredicted RBP12.09□□□□□ -0.47
PDPN-211ENST00000617617 HDCP19113 662 aa12.09□□□□□ -0.47
PDPN-211ENST00000617617 MX2P20592 715 aa12.09□□□□□ -0.47
PDPN-211ENST00000617617 TACR2P21452 398 aa12.09□□□□□ -0.47
PDPN-211ENST00000617617 TNK2Q07912 1038 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms