RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 ARHGDIAP52565 204 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 POU6F1Q14863 301 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 TARBP2Q15633 366 aaKnown RBP9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 SLC45A4Q5BKX6 768 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 STRA8Q7Z7C7 330 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 SLC26A11Q86WA9 606 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 HNRNPLLQ8WVV9 542 aaKnown RBP9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 ZNF670Q9BS34 389 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 LNPEPQ9UIQ6 1025 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 ZMYND8Q9ULU4 1186 aaPredicted RBP9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 RNF112Q9ULX5 631 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 C5P01031 1676 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 CLUHO75153 1309 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 SYCE1LA8MT33 242 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 ALDH1A2O94788 518 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 MDH1P40925 334 aaKnown RBP9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 GYS2P54840 703 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 PURAQ00577 322 aaKnown RBP9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 SP2Q02086 613 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 PARP6Q2NL67 630 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 ZBTB41Q5SVQ8 909 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 TEDDM1Q5T9Z0 273 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 USP45Q70EL2 814 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 ECHDC2Q86YB7 292 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 FBXO25Q8TCJ0 367 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 SMG7Q92540 1137 aaKnown RBP9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 PRMT1Q99873 361 aaKnown RBP9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 C11orf84Q9BUA3 381 aaPredicted RBP9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 CEP41Q9BYV8 373 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 IKZF4Q9H2S9 585 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 RAD18Q9NS91 495 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 NMRK1Q9NWW6 199 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 E2F8A0AVK6 867 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 TMEM120BA0PK00 339 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 ANGPT2O15123 496 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 TRIM16O95361 564 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 F2P00734 622 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 PYGBP11216 843 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 FGFR1P11362 822 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 CNKSR3Q6P9H4 555 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 FBXL19Q6PCT2 694 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 SPATA21Q7Z572 469 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 ZSWIM2Q8NEG5 633 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 C2orf15Q8WU43 125 aaKnown RBP9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 IRGQQ8WZA9 623 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 KREMEN1Q96MU8 473 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 YIPF2Q9BWQ6 316 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 NFKBIZQ9BYH8 718 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 SLC24A2Q9UI40 661 aa9.67□□□□□ -0.86
CLTCL1-208ENST00000615606 ABHD14A-ACY1A0A1B0GW23 586 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 TTC36A6NLP5 189 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 PPP1R37O75864 691 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 ADH1CP00326 375 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 RBP1P09455 135 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 ZNF7P17097 686 aaPredicted RBP9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 RFC2P35250 354 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 TAF10Q12962 218 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 GDF6Q6KF10 455 aaPredicted RBP9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 LVRNQ6Q4G3 990 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 E2F7Q96AV8 911 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 SCLYQ96I15 445 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 RMDN2Q96LZ7 410 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 C1QTNF3-AMACRE9PGA6 284 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 IFRD1O00458 451 aaPredicted RBP9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 SPTLC1O15269 473 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 PIGRP01833 764 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 COL6A1P12109 1028 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 PGAM1P18669 254 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 ATP4AP20648 1035 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 MZF1P28698 734 aaPredicted RBP9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 LILRA4P59901 499 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 SPANXN3Q5MJ09 141 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 ATAT1Q5SQI0 421 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 STRADAQ7RTN6 431 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 GLT6D1Q7Z4J2 308 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 IRF2BP2Q7Z5L9 587 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 PHACTR4Q8IZ21 702 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 ATAD1Q8NBU5 361 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 GIMAP4Q9NUV9 329 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 PSD3Q9NYI0 1048 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 ADA2Q9NZK5 511 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 TBC1D14Q9P2M4 693 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 RGS17Q9UGC6 210 aaPredicted RBP9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 DNPEPQ9ULA0 475 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 SNAI1O95863 264 aaPredicted RBP9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 CST3P01034 146 aaPredicted RBP9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 RBL1P28749 1068 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 PBLDP30039 288 aaPredicted RBP9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 PTPN7P35236 360 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 CD151P48509 253 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 CAMK2GQ13555 558 aaPredicted RBP9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 ACOX1Q15067 660 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 TAF11Q15544 211 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 SLC10A6Q3KNW5 377 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 SPDYE7PQ495Y7 208 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 GPR158Q5T848 1215 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 RASIP1Q5U651 963 aa9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 HIBCHQ6NVY1 386 aaPredicted RBP9.66□□□□□ -0.86
CLTCL1-208ENST00000615606 RFX8Q6ZV50 586 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms