RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 MATKP42679 507 aa14.65□□□□□ -0.06
LIG1-218ENST00000599322 DHPSP49366 369 aaPredicted RBP14.65□□□□□ -0.06
LIG1-218ENST00000599322 CREB5Q02930 508 aa14.65□□□□□ -0.06
LIG1-218ENST00000599322 TAF5Q15542 800 aa14.65□□□□□ -0.06
LIG1-218ENST00000599322 PTPN20Q4JDL3 420 aa14.65□□□□□ -0.06
LIG1-218ENST00000599322 MS4A13Q5J8X5 152 aa14.65□□□□□ -0.06
LIG1-218ENST00000599322 ACBD5Q5T8D3 534 aaPredicted RBP14.65□□□□□ -0.06
LIG1-218ENST00000599322 RNF219Q5W0B1 726 aaPredicted RBP14.65□□□□□ -0.06
LIG1-218ENST00000599322 OLFML1Q6UWY5 402 aa14.65□□□□□ -0.06
LIG1-218ENST00000599322 KIAA1324Q6UXG2 1013 aaKnown RBP14.65□□□□□ -0.06
LIG1-218ENST00000599322 NOP9Q86U38 636 aaKnown RBP14.65□□□□□ -0.06
LIG1-218ENST00000599322 LGI2Q8N0V4 545 aa14.65□□□□□ -0.06
LIG1-218ENST00000599322 FIBINQ8TAL6 211 aa14.65□□□□□ -0.06
LIG1-218ENST00000599322 EPS8L1Q8TE68 723 aa14.65□□□□□ -0.06
LIG1-218ENST00000599322 ERGIC2Q96RQ1 377 aa14.65□□□□□ -0.06
LIG1-218ENST00000599322 WDCPQ9H6R7 721 aa14.65□□□□□ -0.06
LIG1-218ENST00000599322 SEPT11Q9NVA2 429 aaKnown RBP14.65□□□□□ -0.06
LIG1-218ENST00000599322 KIAA1522Q9P206 1035 aaPredicted RBP14.65□□□□□ -0.06
LIG1-218ENST00000599322 SUN2Q9UH99 717 aa14.65□□□□□ -0.06
LIG1-218ENST00000599322 CDV3Q9UKY7 258 aaKnown RBP14.65□□□□□ -0.06
LIG1-218ENST00000599322 ANKRD62A6NC57 917 aa14.64□□□□□ -0.07
LIG1-218ENST00000599322 GOLGA8SH3BPF8 625 aa14.64□□□□□ -0.07
LIG1-218ENST00000599322 DCLK1O15075 740 aa14.64□□□□□ -0.07
LIG1-218ENST00000599322 AP5Z1O43299 807 aa14.64□□□□□ -0.07
LIG1-218ENST00000599322 NDUFS2O75306 463 aa14.64□□□□□ -0.07
LIG1-218ENST00000599322 ASLP04424 464 aa14.64□□□□□ -0.07
LIG1-218ENST00000599322 EPHX1P07099 455 aa14.64□□□□□ -0.07
LIG1-218ENST00000599322 MMEP08473 750 aa14.64□□□□□ -0.07
LIG1-218ENST00000599322 FERP16591 822 aa14.64□□□□□ -0.07
LIG1-218ENST00000599322 ZNF18P17022 549 aa14.64□□□□□ -0.07
LIG1-218ENST00000599322 TACR2P21452 398 aa14.64□□□□□ -0.07
LIG1-218ENST00000599322 P2RY2P41231 377 aa14.64□□□□□ -0.07
LIG1-218ENST00000599322 NSFP46459 744 aaKnown RBP14.64□□□□□ -0.07
LIG1-218ENST00000599322 GABRB2P47870 512 aa14.64□□□□□ -0.07
LIG1-218ENST00000599322 KLK7P49862 253 aa14.64□□□□□ -0.07
LIG1-218ENST00000599322 SULT1E1P49888 294 aa14.64□□□□□ -0.07
LIG1-218ENST00000599322 DEUP1Q05D60 604 aa14.64□□□□□ -0.07
LIG1-218ENST00000599322 SFSWAPQ12872 951 aaKnown RBP14.64□□□□□ -0.07
LIG1-218ENST00000599322 ZNF234Q14588 700 aa14.64□□□□□ -0.07
LIG1-218ENST00000599322 AASDHQ4L235 1098 aaPredicted RBP14.64□□□□□ -0.07
LIG1-218ENST00000599322 FAM133BQ5BKY9 247 aaKnown RBP14.64□□□□□ -0.07
LIG1-218ENST00000599322 SPDYCQ5MJ68 293 aa14.64□□□□□ -0.07
LIG1-218ENST00000599322 NAA35Q5VZE5 725 aa14.64□□□□□ -0.07
LIG1-218ENST00000599322 RAP1GAP2Q684P5 730 aa14.64□□□□□ -0.07
LIG1-218ENST00000599322 MBLAC2Q68D91 279 aa14.64□□□□□ -0.07
LIG1-218ENST00000599322 DPY19L2P1Q6NXN4 242 aa14.64□□□□□ -0.07
LIG1-218ENST00000599322 PPP1R2P3Q6NXS1 205 aa14.64□□□□□ -0.07
LIG1-218ENST00000599322 CYP2U1Q7Z449 544 aa14.64□□□□□ -0.07
LIG1-218ENST00000599322 CPA5Q8WXQ8 436 aa14.64□□□□□ -0.07
LIG1-218ENST00000599322 PRCCQ92733 491 aaPredicted RBP14.64□□□□□ -0.07
LIG1-218ENST00000599322 ACOX2Q99424 681 aa14.64□□□□□ -0.07
LIG1-218ENST00000599322 DUSP15Q9H1R2 295 aaPredicted RBP14.64□□□□□ -0.07
LIG1-218ENST00000599322 VPS45Q9NRW7 570 aa14.64□□□□□ -0.07
LIG1-218ENST00000599322 SIK3Q9Y2K2 1263 aa14.64□□□□□ -0.07
LIG1-218ENST00000599322 ANTXRLA6NF34 631 aa14.63□□□□□ -0.07
LIG1-218ENST00000599322 DLDP09622 509 aaKnown RBP14.63□□□□□ -0.07
LIG1-218ENST00000599322 GABRG2P18507 467 aa14.63□□□□□ -0.07
LIG1-218ENST00000599322 HLA-FP30511 346 aa14.63□□□□□ -0.07
LIG1-218ENST00000599322 SLC6A4P31645 630 aa14.63□□□□□ -0.07
LIG1-218ENST00000599322 MPLP40238 635 aa14.63□□□□□ -0.07
LIG1-218ENST00000599322 SLC12A1Q13621 1099 aa14.63□□□□□ -0.07
LIG1-218ENST00000599322 NCAPHQ15003 741 aa14.63□□□□□ -0.07
LIG1-218ENST00000599322 BRMS1LQ5PSV4 323 aa14.63□□□□□ -0.07
LIG1-218ENST00000599322 LRRC31Q6UY01 552 aa14.63□□□□□ -0.07
LIG1-218ENST00000599322 PRR23CQ6ZRP0 262 aa14.63□□□□□ -0.07
LIG1-218ENST00000599322 CFAP52Q8N1V2 620 aa14.63□□□□□ -0.07
LIG1-218ENST00000599322 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.63□□□□□ -0.07
LIG1-218ENST00000599322 OLIG1Q8TAK6 271 aa14.63□□□□□ -0.07
LIG1-218ENST00000599322 RLN3Q8WXF3 142 aa14.63□□□□□ -0.07
LIG1-218ENST00000599322 RPRD1AQ96P16 312 aaPredicted RBP14.63□□□□□ -0.07
LIG1-218ENST00000599322 NUCKS1Q9H1E3 243 aaKnown RBP14.63□□□□□ -0.07
LIG1-218ENST00000599322 FBRSQ9HAH7 460 aa14.63□□□□□ -0.07
LIG1-218ENST00000599322 PRDM16Q9HAZ2 1276 aa14.63□□□□□ -0.07
LIG1-218ENST00000599322 CALCOCO1Q9P1Z2 691 aa14.63□□□□□ -0.07
LIG1-218ENST00000599322 RAD54BQ9Y620 910 aa14.63□□□□□ -0.07
LIG1-218ENST00000599322 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.63□□□□□ -0.07
LIG1-218ENST00000599322 SDK1Q7Z5N4 2213 aa14.62□□□□□ -0.07
LIG1-218ENST00000599322 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.62□□□□□ -0.07
LIG1-218ENST00000599322 A0A1W2PQF6 199 aa14.62□□□□□ -0.07
LIG1-218ENST00000599322 SYCE3A1L190 88 aa14.62□□□□□ -0.07
LIG1-218ENST00000599322 RNASEH1O60930 286 aaKnown RBP14.62□□□□□ -0.07
LIG1-218ENST00000599322 LUC7L3O95232 432 aaKnown RBP14.62□□□□□ -0.07
LIG1-218ENST00000599322 IGLV3-25P01717 112 aa14.62□□□□□ -0.07
LIG1-218ENST00000599322 CALB1P05937 261 aa14.62□□□□□ -0.07
LIG1-218ENST00000599322 ZNF806P0C7X5 589 aa14.62□□□□□ -0.07
LIG1-218ENST00000599322 ATP1A3P13637 1013 aa14.62□□□□□ -0.07
LIG1-218ENST00000599322 OXTRP30559 389 aa14.62□□□□□ -0.07
LIG1-218ENST00000599322 IL12RB1P42701 662 aa14.62□□□□□ -0.07
LIG1-218ENST00000599322 JAM2P57087 298 aa14.62□□□□□ -0.07
LIG1-218ENST00000599322 RPS24P62847 133 aaKnown RBP14.62□□□□□ -0.07
LIG1-218ENST00000599322 NOMO3P69849 1222 aa14.62□□□□□ -0.07
LIG1-218ENST00000599322 RPL6Q02878 288 aaKnown RBP14.62□□□□□ -0.07
LIG1-218ENST00000599322 ZNF177Q13360 481 aaPredicted RBP14.62□□□□□ -0.07
LIG1-218ENST00000599322 ARL13BQ3SXY8 428 aa14.62□□□□□ -0.07
LIG1-218ENST00000599322 SLC25A52Q3SY17 297 aa14.62□□□□□ -0.07
LIG1-218ENST00000599322 PMS2CLQ68D20 193 aa14.62□□□□□ -0.07
LIG1-218ENST00000599322 NADSYN1Q6IA69 706 aa14.62□□□□□ -0.07
LIG1-218ENST00000599322 XYLT1Q86Y38 959 aa14.62□□□□□ -0.07
LIG1-218ENST00000599322 NETO1Q8TDF5 533 aa14.62□□□□□ -0.07
LIG1-218ENST00000599322 DDX1Q92499 740 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms