RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 ZNF781Q8N8C0 355 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 NSUN6Q8TEA1 469 aaKnown RBP12.92□□□□□ -0.34
ZNF558-205ENST00000597304 ABTB1Q969K4 478 aaPredicted RBP12.92□□□□□ -0.34
ZNF558-205ENST00000597304 GFM2Q969S9 779 aaKnown RBP12.92□□□□□ -0.34
ZNF558-205ENST00000597304 PPP1R1BQ9UD71 204 aaPredicted RBP12.92□□□□□ -0.34
ZNF558-205ENST00000597304 CPSF3Q9UKF6 684 aaKnown RBP12.92□□□□□ -0.34
ZNF558-205ENST00000597304 PADI4Q9UM07 663 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 SCN4AP35499 1836 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 PIK3R2O00459 728 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 GRAP2O75791 330 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 CPA3P15088 417 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 TYK2P29597 1187 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 SLC5A2P31639 672 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 GPD2P43304 727 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 THOP1P52888 689 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 NAB1Q13506 487 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 CCDC153Q494R4 210 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 PPM1JQ5JR12 505 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 PAOXQ6QHF9 649 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 TSHZ1Q6ZSZ6 1077 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 KYQ8NBH2 561 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 DIS3LQ8TF46 1054 aaKnown RBP12.92□□□□□ -0.34
ZNF558-205ENST00000597304 TWNKQ96RR1 684 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 OXCT2Q9BYC2 517 aaPredicted RBP12.92□□□□□ -0.34
ZNF558-205ENST00000597304 BCO2Q9BYV7 579 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 NGRNQ9NPE2 291 aaKnown RBP12.92□□□□□ -0.34
ZNF558-205ENST00000597304 TCF7L2Q9NQB0 619 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 TXNDC16Q9P2K2 825 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 HMGXB4Q9UGU5 601 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 ZNF510Q9Y2H8 683 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 RIPK3Q9Y572 518 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 MAFBQ9Y5Q3 323 aaPredicted RBP12.92□□□□□ -0.34
ZNF558-205ENST00000597304 ADCY6O43306 1168 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 MSCO60682 206 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 TRPA1O75762 1119 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 XRCC1P18887 633 aaPredicted RBP12.92□□□□□ -0.34
ZNF558-205ENST00000597304 PIK3R1P27986 724 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 GALK1P51570 392 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 EMP3P54852 163 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 COG7P83436 770 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 SEMA5AQ13591 1074 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 STILQ15468 1287 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 FAM183BPQ6ZVS7 135 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 SNX32Q86XE0 403 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 DSELQ8IZU8 1212 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 GALNT4Q8N4A0 578 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 ZNF526Q8TF50 670 aaPredicted RBP12.92□□□□□ -0.34
ZNF558-205ENST00000597304 PPP1R14BQ96C90 147 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 CDRT15Q96T59 188 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 ZNF670Q9BS34 389 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 USP21Q9UK80 565 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 AK5Q9Y6K8 562 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 RPS6KL1Q9Y6S9 549 aa12.92□□□□□ -0.34
ZNF558-205ENST00000597304 CDH2P19022 906 aaPredicted RBP12.91□□□□□ -0.34
ZNF558-205ENST00000597304 GARSP41250 739 aaKnown RBP12.91□□□□□ -0.34
ZNF558-205ENST00000597304 MAGEA8P43361 318 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 CRADDP78560 199 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 CDKL1Q00532 357 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 CREB5Q02930 508 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 ZNF423Q2M1K9 1284 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 PIGGQ5H8A4 983 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 PPP6R3Q5H9R7 873 aaPredicted RBP12.91□□□□□ -0.34
ZNF558-205ENST00000597304 DPH6Q7L8W6 267 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 AMIGO2Q86SJ2 522 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 NUP93Q8N1F7 819 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 BHLHE22Q8NFJ8 381 aaPredicted RBP12.91□□□□□ -0.34
ZNF558-205ENST00000597304 UBA3Q8TBC4 463 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 PRPF31Q8WWY3 499 aaKnown RBP12.91□□□□□ -0.34
ZNF558-205ENST00000597304 DLG3Q92796 817 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 TMEM176AQ96HP8 235 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 PIWIL1Q96J94 861 aaKnown RBP12.91□□□□□ -0.34
ZNF558-205ENST00000597304 ACO2Q99798 780 aaKnown RBP12.91□□□□□ -0.34
ZNF558-205ENST00000597304 SNRNP25Q9BV90 132 aaKnown RBP12.91□□□□□ -0.34
ZNF558-205ENST00000597304 PSAT1Q9Y617 370 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 CEPT1Q9Y6K0 416 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 E2F8A0AVK6 867 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 RGSL1A5PLK6 1076 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 H3BSA7 217 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 GLDCP23378 1020 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 NUMBP49757 651 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 EFNA5P52803 228 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 PPIDQ08752 370 aaKnown RBP12.91□□□□□ -0.34
ZNF558-205ENST00000597304 CA9Q16790 459 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 LILRA2Q8N149 483 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 TDRD5Q8NAT2 981 aaKnown RBP12.91□□□□□ -0.34
ZNF558-205ENST00000597304 MAPK15Q8TD08 544 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 KBTBD7Q8WVZ9 684 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 OR52B2Q96RD2 323 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 FERMT1Q9BQL6 677 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 HAUS8Q9BT25 410 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 ELOVL4Q9GZR5 314 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 VPS33BQ9H267 617 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 RPAP3Q9H6T3 665 aaPredicted RBP12.91□□□□□ -0.34
ZNF558-205ENST00000597304 MORF4L1Q9UBU8 362 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 VPS28Q9UK41 221 aa12.91□□□□□ -0.34
ZNF558-205ENST00000597304 MGAMO43451 1857 aa12.9□□□□□ -0.34
ZNF558-205ENST00000597304 ANK1P16157 1881 aa12.9□□□□□ -0.34
ZNF558-205ENST00000597304 SPATA31C2B4DYI2 1134 aa12.9□□□□□ -0.34
ZNF558-205ENST00000597304 GPR25O00155 361 aa12.9□□□□□ -0.34
ZNF558-205ENST00000597304 VWA5AO00534 786 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms