RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 KIF26AQ9ULI4 1882 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-218ENST00000555213 TMEM110-MUSTN1A8MSY1 372 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 KCNU1A8MYU2 1149 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 F5H5T6 163 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 SPECC1L-ADORA2AF8WAN1 911 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 PI4K2BG5E9Z4 385 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 MYO1FO00160 1098 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 HOXC11O43248 304 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-218ENST00000555213 RNF8O76064 485 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 KLKB1P03952 638 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 TCF4P15884 667 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 CTNNA2P26232 953 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 CXCR5P32302 372 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 CTHP32929 405 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 MARCKSL1P49006 195 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 CXCR3P49682 368 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 TAS2R40P59535 323 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 TUBB2AQ13885 445 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 DHCR24Q15392 516 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 RPS6KA1Q15418 735 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 C15orf59Q2T9L4 293 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-218ENST00000555213 PREPLQ4J6C6 727 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-218ENST00000555213 RAB6CQ53S08 254 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 LY6G5CQ5SRR4 150 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 OTUD1Q5VV17 481 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-218ENST00000555213 DAB2IPQ5VWQ8 1189 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 ZNF852Q6ZMS4 543 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 CHSY1Q86X52 802 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 CCDC117Q8IWD4 279 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-218ENST00000555213 FAM217AQ8IXS0 508 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 HJURPQ8NCD3 748 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-218ENST00000555213 TTC8Q8TAM2 541 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 WBP2Q969T9 261 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 MS4A14Q96JA4 679 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 XPO6Q96QU8 1125 aaKnown RBP11.29□□□□□ -0.6
SHMT2-218ENST00000555213 TUBB2BQ9BVA1 445 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 CARD6Q9BX69 1037 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 BBS2Q9BXC9 721 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 ADAM33Q9BZ11 813 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 RAB6CQ9H0N0 254 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 MARK1Q9P0L2 795 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 IP6K2Q9UHH9 426 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 STOML2Q9UJZ1 356 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 PCDHA3Q9Y5H8 950 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 BDP1A6H8Y1 2624 aa11.29□□□□□ -0.6
SHMT2-218ENST00000555213 TMEM221A6NGB7 291 aa11.28□□□□□ -0.6
SHMT2-218ENST00000555213 NEDD8-MDP1E9PL57 170 aa11.28□□□□□ -0.6
SHMT2-218ENST00000555213 M0R296 226 aa11.28□□□□□ -0.6
SHMT2-218ENST00000555213 TFE3P19532 575 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-218ENST00000555213 GJA4P35212 333 aa11.28□□□□□ -0.6
SHMT2-218ENST00000555213 AIF1P55008 147 aa11.28□□□□□ -0.6
SHMT2-218ENST00000555213 VCPP55072 806 aaKnown RBP11.28□□□□□ -0.6
SHMT2-218ENST00000555213 PIGHQ14442 188 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-218ENST00000555213 ACAP1Q15027 740 aa11.28□□□□□ -0.6
SHMT2-218ENST00000555213 MPPE1Q53F39 396 aa11.28□□□□□ -0.6
SHMT2-218ENST00000555213 RABGAP1LQ5R372 815 aa11.28□□□□□ -0.6
SHMT2-218ENST00000555213 SH3PXD2AQ5TCZ1 1133 aa11.28□□□□□ -0.6
SHMT2-218ENST00000555213 TTC39BQ5VTQ0 682 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-218ENST00000555213 TPGS1Q6ZTW0 290 aa11.28□□□□□ -0.6
SHMT2-218ENST00000555213 ZNF572Q7Z3I7 529 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-218ENST00000555213 FAM131BQ86XD5 332 aa11.28□□□□□ -0.6
SHMT2-218ENST00000555213 SUGP1Q8IWZ8 645 aaKnown RBP11.28□□□□□ -0.6
SHMT2-218ENST00000555213 ADGRG2Q8IZP9 1017 aa11.28□□□□□ -0.6
SHMT2-218ENST00000555213 RASGEF1CQ8N431 466 aa11.28□□□□□ -0.6
SHMT2-218ENST00000555213 NIPA2Q8N8Q9 360 aa11.28□□□□□ -0.6
SHMT2-218ENST00000555213 ZNF557Q8N988 423 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-218ENST00000555213 MYRIPQ8NFW9 859 aa11.28□□□□□ -0.6
SHMT2-218ENST00000555213 DDI1Q8WTU0 396 aa11.28□□□□□ -0.6
SHMT2-218ENST00000555213 UBE2Q2Q8WVN8 375 aa11.28□□□□□ -0.6
SHMT2-218ENST00000555213 CENPIQ92674 756 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-218ENST00000555213 PSMB7Q99436 277 aa11.28□□□□□ -0.6
SHMT2-218ENST00000555213 TKTL2Q9H0I9 626 aa11.28□□□□□ -0.6
SHMT2-218ENST00000555213 TBC1D17Q9HA65 648 aa11.28□□□□□ -0.6
SHMT2-218ENST00000555213 ARHGEF38Q9NXL2 777 aa11.28□□□□□ -0.6
SHMT2-218ENST00000555213 SMARCAL1Q9NZC9 954 aa11.28□□□□□ -0.6
SHMT2-218ENST00000555213 STK25O00506 426 aa11.27□□□□□ -0.61
SHMT2-218ENST00000555213 CES2O00748 559 aa11.27□□□□□ -0.61
SHMT2-218ENST00000555213 CTIFO43310 598 aaKnown RBP11.27□□□□□ -0.61
SHMT2-218ENST00000555213 PAGE1O75459 146 aa11.27□□□□□ -0.61
SHMT2-218ENST00000555213 ENDOD1O94919 500 aa11.27□□□□□ -0.61
SHMT2-218ENST00000555213 TYRP14679 529 aa11.27□□□□□ -0.61
SHMT2-218ENST00000555213 TCP1P17987 556 aaKnown RBP11.27□□□□□ -0.61
SHMT2-218ENST00000555213 TACR2P21452 398 aa11.27□□□□□ -0.61
SHMT2-218ENST00000555213 MAN1A1P33908 653 aa11.27□□□□□ -0.61
SHMT2-218ENST00000555213 CTNNA1P35221 906 aaKnown RBP11.27□□□□□ -0.61
SHMT2-218ENST00000555213 EIF2DP41214 584 aaKnown RBP11.27□□□□□ -0.61
SHMT2-218ENST00000555213 SLC1A1P43005 524 aa11.27□□□□□ -0.61
SHMT2-218ENST00000555213 SOX9P48436 509 aa11.27□□□□□ -0.61
SHMT2-218ENST00000555213 HDAC4P56524 1084 aa11.27□□□□□ -0.61
SHMT2-218ENST00000555213 GRSF1Q12849 480 aaKnown RBP eCLIP11.27□□□□□ -0.61
SHMT2-218ENST00000555213 EIF4EBP2Q13542 120 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-218ENST00000555213 NAA30Q147X3 362 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-218ENST00000555213 WHAMMP3Q1A5X7 153 aa11.27□□□□□ -0.61
SHMT2-218ENST00000555213 ATP13A4Q4VNC1 1196 aa11.27□□□□□ -0.61
SHMT2-218ENST00000555213 EFHC2Q5JST6 749 aa11.27□□□□□ -0.61
SHMT2-218ENST00000555213 RAP1GAP2Q684P5 730 aa11.27□□□□□ -0.61
SHMT2-218ENST00000555213 TXNRD3NBQ6F5E7 133 aa11.27□□□□□ -0.61
SHMT2-218ENST00000555213 AADACL2Q6P093 401 aa11.27□□□□□ -0.61
SHMT2-218ENST00000555213 SCYL2Q6P3W7 929 aa11.27□□□□□ -0.61
SHMT2-218ENST00000555213 RHBDF2Q6PJF5 856 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms