RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 TRMUO75648 421 aaKnown RBP14.58□□□□□ -0.08
SRP54-202ENST00000546080 TRPA1O75762 1119 aa14.58□□□□□ -0.08
SRP54-202ENST00000546080 GRAP2O75791 330 aa14.58□□□□□ -0.08
SRP54-202ENST00000546080 ALDH1A2O94788 518 aa14.58□□□□□ -0.08
SRP54-202ENST00000546080 HOXC6P09630 235 aa14.58□□□□□ -0.08
SRP54-202ENST00000546080 SETSIPP0DME0 302 aa14.58□□□□□ -0.08
SRP54-202ENST00000546080 CPA3P15088 417 aa14.58□□□□□ -0.08
SRP54-202ENST00000546080 PCSK6P29122 969 aa14.58□□□□□ -0.08
SRP54-202ENST00000546080 ADRM1Q16186 407 aa14.58□□□□□ -0.08
SRP54-202ENST00000546080 USP41Q3LFD5 358 aa14.58□□□□□ -0.08
SRP54-202ENST00000546080 BOLA3Q53S33 107 aa14.58□□□□□ -0.08
SRP54-202ENST00000546080 TSHZ1Q6ZSZ6 1077 aa14.58□□□□□ -0.08
SRP54-202ENST00000546080 DPH6Q7L8W6 267 aa14.58□□□□□ -0.08
SRP54-202ENST00000546080 ZNF410Q86VK4 478 aa14.58□□□□□ -0.08
SRP54-202ENST00000546080 TICAM1Q8IUC6 712 aa14.58□□□□□ -0.08
SRP54-202ENST00000546080 NLGN1Q8N2Q7 840 aa14.58□□□□□ -0.08
SRP54-202ENST00000546080 ZNF781Q8N8C0 355 aa14.58□□□□□ -0.08
SRP54-202ENST00000546080 NSUN6Q8TEA1 469 aaKnown RBP14.58□□□□□ -0.08
SRP54-202ENST00000546080 TXNDC16Q9P2K2 825 aa14.58□□□□□ -0.08
SRP54-202ENST00000546080 CPSF3Q9UKF6 684 aaKnown RBP14.58□□□□□ -0.08
SRP54-202ENST00000546080 RIPK3Q9Y572 518 aa14.58□□□□□ -0.08
SRP54-202ENST00000546080 KIAA1217Q5T5P2 1943 aa14.58□□□□□ -0.08
SRP54-202ENST00000546080 PIK3R1P27986 724 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 TYK2P29597 1187 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 SLC5A2P31639 672 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 GALK1P51570 392 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 THOP1P52888 689 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 COG7P83436 770 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 SULT2A1Q06520 285 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 NAB1Q13506 487 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 CCDC153Q494R4 210 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 PPM1JQ5JR12 505 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 METTL21CQ5VZV1 264 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 SMYD5Q6GMV2 418 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 PAOXQ6QHF9 649 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 GALNT4Q8N4A0 578 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 KYQ8NBH2 561 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 UBA3Q8TBC4 463 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 GFM2Q969S9 779 aaKnown RBP14.57□□□□□ -0.08
SRP54-202ENST00000546080 TWNKQ96RR1 684 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 OXCT2Q9BYC2 517 aaPredicted RBP14.57□□□□□ -0.08
SRP54-202ENST00000546080 NGRNQ9NPE2 291 aaKnown RBP14.57□□□□□ -0.08
SRP54-202ENST00000546080 PPP1R1BQ9UD71 204 aaPredicted RBP14.57□□□□□ -0.08
SRP54-202ENST00000546080 HMGXB4Q9UGU5 601 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 PADI4Q9UM07 663 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 MAFBQ9Y5Q3 323 aaPredicted RBP14.57□□□□□ -0.08
SRP54-202ENST00000546080 E2F8A0AVK6 867 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 ADCY6O43306 1168 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 XRCC1P18887 633 aaPredicted RBP14.57□□□□□ -0.08
SRP54-202ENST00000546080 GARSP41250 739 aaKnown RBP14.57□□□□□ -0.08
SRP54-202ENST00000546080 GPD2P43304 727 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 EMP3P54852 163 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 CRADDP78560 199 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 SEMA5AQ13591 1074 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 STILQ15468 1287 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 PPP6R3Q5H9R7 873 aaPredicted RBP14.57□□□□□ -0.08
SRP54-202ENST00000546080 FAM183BPQ6ZVS7 135 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 AMIGO2Q86SJ2 522 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 SNX32Q86XE0 403 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 DSELQ8IZU8 1212 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 BHLHE22Q8NFJ8 381 aaPredicted RBP14.57□□□□□ -0.08
SRP54-202ENST00000546080 DIS3LQ8TF46 1054 aaKnown RBP14.57□□□□□ -0.08
SRP54-202ENST00000546080 ZNF526Q8TF50 670 aaPredicted RBP14.57□□□□□ -0.08
SRP54-202ENST00000546080 PRPF31Q8WWY3 499 aaKnown RBP14.57□□□□□ -0.08
SRP54-202ENST00000546080 PPP1R14BQ96C90 147 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 TMEM176AQ96HP8 235 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 CDRT15Q96T59 188 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 ZNF670Q9BS34 389 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 SNRNP25Q9BV90 132 aaKnown RBP14.57□□□□□ -0.08
SRP54-202ENST00000546080 BCO2Q9BYV7 579 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 TCF7L2Q9NQB0 619 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 ZNF510Q9Y2H8 683 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 AK5Q9Y6K8 562 aa14.57□□□□□ -0.08
SRP54-202ENST00000546080 H3BSA7 217 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 MSCO60682 206 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 TPP2P29144 1249 aaPredicted RBP14.56□□□□□ -0.08
SRP54-202ENST00000546080 CDKL1Q00532 357 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 PPIDQ08752 370 aaKnown RBP14.56□□□□□ -0.08
SRP54-202ENST00000546080 SMAD1Q15797 465 aaKnown RBP14.56□□□□□ -0.08
SRP54-202ENST00000546080 CA9Q16790 459 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 ZNF423Q2M1K9 1284 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 LILRA2Q8N149 483 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 NUP93Q8N1F7 819 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 TDRD5Q8NAT2 981 aaKnown RBP14.56□□□□□ -0.08
SRP54-202ENST00000546080 AGR3Q8TD06 166 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 SREK1Q8WXA9 508 aaKnown RBP14.56□□□□□ -0.08
SRP54-202ENST00000546080 DLG3Q92796 817 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 PIWIL1Q96J94 861 aaKnown RBP14.56□□□□□ -0.08
SRP54-202ENST00000546080 OR52B2Q96RD2 323 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 ACO2Q99798 780 aaKnown RBP14.56□□□□□ -0.08
SRP54-202ENST00000546080 PKP2Q99959 881 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 ELOVL4Q9GZR5 314 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 ZNF358Q9NW07 568 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 PSAT1Q9Y617 370 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 CEPT1Q9Y6K0 416 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 RPS6KL1Q9Y6S9 549 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 RGSL1A5PLK6 1076 aa14.56□□□□□ -0.08
SRP54-202ENST00000546080 F5H423 210 aaPredicted RBP14.56□□□□□ -0.08
SRP54-202ENST00000546080 HNRNPCP07910 306 aaKnown RBP eCLIP14.56□□□□□ -0.085e-7■■■□□ 16.2
SRP54-202ENST00000546080 PSMC3P17980 439 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms