RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 MAP3K7CLP57077 242 aa10.15□□□□□ -0.78
USP35-201ENST00000526425 NOGQ13253 232 aa10.15□□□□□ -0.78
USP35-201ENST00000526425 FBXO47Q5MNV8 452 aa10.15□□□□□ -0.78
USP35-201ENST00000526425 ANKRD22Q5VYY1 191 aa10.15□□□□□ -0.78
USP35-201ENST00000526425 RBM44Q6ZP01 1051 aaKnown RBP10.15□□□□□ -0.78
USP35-201ENST00000526425 APLFQ8IW19 511 aaPredicted RBP10.15□□□□□ -0.78
USP35-201ENST00000526425 WDTC1Q8N5D0 677 aa10.15□□□□□ -0.78
USP35-201ENST00000526425 FAM13CQ8NE31 585 aa10.15□□□□□ -0.78
USP35-201ENST00000526425 HDAC2Q92769 488 aaKnown RBP10.15□□□□□ -0.78
USP35-201ENST00000526425 CNPY3Q9BT09 278 aa10.15□□□□□ -0.78
USP35-201ENST00000526425 TPK1Q9H3S4 243 aa10.15□□□□□ -0.78
USP35-201ENST00000526425 ASB7Q9H672 318 aa10.15□□□□□ -0.78
USP35-201ENST00000526425 STYXL1Q9Y6J8 313 aa10.15□□□□□ -0.78
USP35-201ENST00000526425 A8MU76 341 aa10.15□□□□□ -0.79
USP35-201ENST00000526425 PMM2O15305 246 aa10.15□□□□□ -0.79
USP35-201ENST00000526425 PIGRP01833 764 aa10.15□□□□□ -0.79
USP35-201ENST00000526425 ACADSP16219 412 aa10.15□□□□□ -0.79
USP35-201ENST00000526425 LMO2P25791 158 aa10.15□□□□□ -0.79
USP35-201ENST00000526425 FLT3LGP49771 235 aa10.15□□□□□ -0.79
USP35-201ENST00000526425 ADIGQ0VDE8 80 aa10.15□□□□□ -0.79
USP35-201ENST00000526425 STAT4Q14765 748 aa10.15□□□□□ -0.79
USP35-201ENST00000526425 KHDC1Q4VXA5 237 aaKnown RBP10.15□□□□□ -0.79
USP35-201ENST00000526425 ZNF618Q5T7W0 954 aa10.15□□□□□ -0.79
USP35-201ENST00000526425 SYDE1Q6ZW31 735 aaPredicted RBP10.15□□□□□ -0.79
USP35-201ENST00000526425 XYLT1Q86Y38 959 aa10.15□□□□□ -0.79
USP35-201ENST00000526425 DTX3Q8N9I9 347 aa10.15□□□□□ -0.79
USP35-201ENST00000526425 EDEM1Q92611 657 aa10.15□□□□□ -0.79
USP35-201ENST00000526425 FAM129AQ9BZQ8 928 aa10.15□□□□□ -0.79
USP35-201ENST00000526425 TIMM22Q9Y584 194 aa10.15□□□□□ -0.79
USP35-201ENST00000526425 GPC6Q9Y625 555 aaPredicted RBP10.15□□□□□ -0.79
USP35-201ENST00000526425 NRCAMQ92823 1304 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 CENPFP49454 3210 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 AP3B1O00203 1094 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 SLC10A3P09131 477 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 SRGAP2BP0DMP2 458 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 AMPD1P23109 780 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 RBL1P28749 1068 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 RPL22P35268 128 aaKnown RBP10.14□□□□□ -0.79
USP35-201ENST00000526425 TRPC1P48995 793 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 CRADDP78560 199 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 HEATR6Q6AI08 1181 aaKnown RBP10.14□□□□□ -0.79
USP35-201ENST00000526425 KLHL35Q6PF15 583 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 STKLD1Q8NE28 680 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 SLC7A14Q8TBB6 771 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 OLFM3Q96PB7 478 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 GAD1Q99259 594 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 MAGEB5Q9BZ81 275 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 XYLT2Q9H1B5 865 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 RSAD1Q9HA92 442 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 SLC12A6Q9UHW9 1150 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 NUDT5Q9UKK9 219 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 ADGRA2Q96PE1 1338 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 C17orf102A2RUQ5 167 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 ZBTB42B2RXF5 422 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 CYB561D2O14569 222 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 CA12O43570 354 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 PEX11AO75192 247 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 CILPO75339 1184 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 DCTN3O75935 186 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 TPPPO94811 219 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 HOXD10P28358 340 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 ATICP31939 592 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 PSEN2P49810 448 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 DRG2P55039 364 aaKnown RBP10.14□□□□□ -0.79
USP35-201ENST00000526425 GEMIN4P57678 1058 aaKnown RBP10.14□□□□□ -0.79
USP35-201ENST00000526425 BMPR2Q13873 1038 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 TAF12Q16514 161 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 MDH1BQ5I0G3 518 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 CTU1Q7Z7A3 348 aaKnown RBP10.14□□□□□ -0.79
USP35-201ENST00000526425 RAET1EQ8TD07 263 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 OSCP1Q8WVF1 389 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 APOL2Q9BQE5 337 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 KLC2Q9H0B6 622 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 WDR6Q9NNW5 1121 aaKnown RBP10.14□□□□□ -0.79
USP35-201ENST00000526425 M0QYT0 321 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 PRKACBP22694 351 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 S100A1P23297 94 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 THPOP40225 353 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 ELK3P41970 407 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 CDKN2BP42772 138 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 SPARCL1Q14515 664 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 SIX1Q15475 284 aaPredicted RBP10.14□□□□□ -0.79
USP35-201ENST00000526425 MARK2Q7KZI7 788 aaKnown RBP10.14□□□□□ -0.79
USP35-201ENST00000526425 PPIL6Q8IXY8 311 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 KIAA2013Q8IYS2 634 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 ADGRF2Q8IZF7 708 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 PDZD8Q8NEN9 1154 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 KLHL25Q9H0H3 589 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 LIN28AQ9H9Z2 209 aaKnown RBP10.14□□□□□ -0.79
USP35-201ENST00000526425 MARCOQ9UEW3 520 aaPredicted RBP10.14□□□□□ -0.79
USP35-201ENST00000526425 ITGA11Q9UKX5 1188 aa10.14□□□□□ -0.79
USP35-201ENST00000526425 KPNA7A9QM74 516 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 B3GAT3O94766 335 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 TAF6P49848 677 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 BNIP1Q12981 228 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 CNGA2Q16280 664 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 KYAT1Q16773 422 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 DEFB115Q30KQ5 88 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 WDR45BQ5MNZ6 344 aa10.13□□□□□ -0.79
USP35-201ENST00000526425 FYB2Q5VWT5 728 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms