RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 RHBDL3P58872 404 aa5.47□□□□□ -1.53
BRCA1-217ENST00000487825 SIGLEC14Q08ET2 396 aa5.47□□□□□ -1.53
BRCA1-217ENST00000487825 PTPROQ16827 1216 aa5.47□□□□□ -1.53
BRCA1-217ENST00000487825 SHROOM1Q2M3G4 852 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-217ENST00000487825 CCDC157Q569K6 752 aa5.47□□□□□ -1.53
BRCA1-217ENST00000487825 ZNF788Q6ZQV5 615 aa5.47□□□□□ -1.53
BRCA1-217ENST00000487825 CHMP4CQ96CF2 233 aa5.47□□□□□ -1.53
BRCA1-217ENST00000487825 GTPBP4Q9BZE4 634 aaKnown RBP5.47□□□□□ -1.53
BRCA1-217ENST00000487825 AMBRA1Q9C0C7 1298 aa5.47□□□□□ -1.53
BRCA1-217ENST00000487825 SPATC1LQ9H0A9 340 aa5.47□□□□□ -1.53
BRCA1-217ENST00000487825 SIK2Q9H0K1 926 aa5.47□□□□□ -1.53
BRCA1-217ENST00000487825 DLL3Q9NYJ7 618 aa5.47□□□□□ -1.53
BRCA1-217ENST00000487825 DKK3Q9UBP4 350 aa5.47□□□□□ -1.53
BRCA1-217ENST00000487825 SCN10AQ9Y5Y9 1956 aa5.47□□□□□ -1.53
BRCA1-217ENST00000487825 GCN1Q92616 2671 aaKnown RBP5.47□□□□□ -1.53
BRCA1-217ENST00000487825 MROH7-TTC4A0A0A0MT08 1334 aa5.47□□□□□ -1.53
BRCA1-217ENST00000487825 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.46□□□□□ -1.54
BRCA1-217ENST00000487825 WDR27A2RRH5 827 aa5.46□□□□□ -1.54
BRCA1-217ENST00000487825 H3BUI4 141 aa5.46□□□□□ -1.54
BRCA1-217ENST00000487825 ZZEF1O43149 2961 aa5.46□□□□□ -1.54
BRCA1-217ENST00000487825 DUSP11O75319 330 aaKnown RBP5.46□□□□□ -1.54
BRCA1-217ENST00000487825 URI1O94763 535 aaPredicted RBP5.46□□□□□ -1.54
BRCA1-217ENST00000487825 PDHA1P08559 390 aa5.46□□□□□ -1.54
BRCA1-217ENST00000487825 TYRP14679 529 aa5.46□□□□□ -1.54
BRCA1-217ENST00000487825 VCAM1P19320 739 aa5.46□□□□□ -1.54
BRCA1-217ENST00000487825 WT1P19544 449 aaPredicted RBP5.46□□□□□ -1.54
BRCA1-217ENST00000487825 BTDP43251 543 aa5.46□□□□□ -1.54
BRCA1-217ENST00000487825 TOB1P50616 345 aaPredicted RBP5.46□□□□□ -1.54
BRCA1-217ENST00000487825 PUM3Q15397 648 aaKnown RBP5.46□□□□□ -1.54
BRCA1-217ENST00000487825 PGS1Q32NB8 556 aa5.46□□□□□ -1.54
BRCA1-217ENST00000487825 FAM153CQ494X1 144 aa5.46□□□□□ -1.54
BRCA1-217ENST00000487825 VPS53Q5VIR6 699 aa5.46□□□□□ -1.54
BRCA1-217ENST00000487825 G2E3Q7L622 706 aa5.46□□□□□ -1.54
BRCA1-217ENST00000487825 CAMKK1Q8N5S9 505 aa5.46□□□□□ -1.54
BRCA1-217ENST00000487825 C8orf58Q8NAV2 365 aa5.46□□□□□ -1.54
BRCA1-217ENST00000487825 DNAAF4Q8WXU2 420 aa5.46□□□□□ -1.54
BRCA1-217ENST00000487825 FKBP10Q96AY3 582 aa5.46□□□□□ -1.54
BRCA1-217ENST00000487825 SARAFQ96BY9 339 aa5.46□□□□□ -1.54
BRCA1-217ENST00000487825 MRPL38Q96DV4 380 aaKnown RBP5.46□□□□□ -1.54
BRCA1-217ENST00000487825 UPF3AQ9H1J1 476 aaKnown RBP5.46□□□□□ -1.54
BRCA1-217ENST00000487825 MROH8Q9H579 483 aa5.46□□□□□ -1.54
BRCA1-217ENST00000487825 DNAJC18Q9H819 358 aa5.46□□□□□ -1.54
BRCA1-217ENST00000487825 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.46□□□□□ -1.54
BRCA1-217ENST00000487825 ADAM21Q9UKJ8 722 aa5.46□□□□□ -1.54
BRCA1-217ENST00000487825 ZDHHC8Q9ULC8 765 aa5.46□□□□□ -1.54
BRCA1-217ENST00000487825 RAD54BQ9Y620 910 aa5.46□□□□□ -1.54
BRCA1-217ENST00000487825 MAST4O15021 2626 aa5.46□□□□□ -1.54
BRCA1-217ENST00000487825 ZFYVE26Q68DK2 2539 aa5.46□□□□□ -1.54
BRCA1-217ENST00000487825 FRYQ5TBA9 3013 aa5.45□□□□□ -1.54
BRCA1-217ENST00000487825 GPR75-ASB3A0A0A6YYF3 556 aa5.45□□□□□ -1.54
BRCA1-217ENST00000487825 MBTPS2O43462 519 aa5.45□□□□□ -1.54
BRCA1-217ENST00000487825 TTLL1O95922 423 aa5.45□□□□□ -1.54
BRCA1-217ENST00000487825 IFIT1P09914 478 aaKnown RBP5.45□□□□□ -1.54
BRCA1-217ENST00000487825 ITPKBP27987 946 aa5.45□□□□□ -1.54
BRCA1-217ENST00000487825 CD6P30203 668 aa5.45□□□□□ -1.54
BRCA1-217ENST00000487825 EXOSC9Q06265 439 aaKnown RBP5.45□□□□□ -1.54
BRCA1-217ENST00000487825 BOP1Q14137 746 aaKnown RBP5.45□□□□□ -1.54
BRCA1-217ENST00000487825 LRRC24Q50LG9 513 aa5.45□□□□□ -1.54
BRCA1-217ENST00000487825 DZIP1Q86YF9 867 aaKnown RBP5.45□□□□□ -1.54
BRCA1-217ENST00000487825 FAM46DQ8NEK8 389 aa5.45□□□□□ -1.54
BRCA1-217ENST00000487825 RFKQ969G6 155 aa5.45□□□□□ -1.54
BRCA1-217ENST00000487825 FAM136AQ96C01 138 aa5.45□□□□□ -1.54
BRCA1-217ENST00000487825 GPATCH3Q96I76 525 aa5.45□□□□□ -1.54
BRCA1-217ENST00000487825 PBKQ96KB5 322 aa5.45□□□□□ -1.54
BRCA1-217ENST00000487825 TGS1Q96RS0 853 aaKnown RBP5.45□□□□□ -1.54
BRCA1-217ENST00000487825 OSBPL9Q96SU4 736 aa5.45□□□□□ -1.54
BRCA1-217ENST00000487825 SEZ6LQ9BYH1 1024 aa5.45□□□□□ -1.54
BRCA1-217ENST00000487825 KMT5AQ9NQR1 393 aa5.45□□□□□ -1.54
BRCA1-217ENST00000487825 AASDHPPTQ9NRN7 309 aa5.45□□□□□ -1.54
BRCA1-217ENST00000487825 PNPOQ9NVS9 261 aa5.45□□□□□ -1.54
BRCA1-217ENST00000487825 PI4KBQ9UBF8 816 aa5.45□□□□□ -1.54
BRCA1-217ENST00000487825 IP6K2Q9UHH9 426 aa5.45□□□□□ -1.54
BRCA1-217ENST00000487825 MTUS1Q9ULD2 1270 aa5.45□□□□□ -1.54
BRCA1-217ENST00000487825 WDFY3Q8IZQ1 3526 aa5.45□□□□□ -1.54
BRCA1-217ENST00000487825 FLNBO75369 2602 aaKnown RBP5.44□□□□□ -1.54
BRCA1-217ENST00000487825 KIAA1671Q9BY89 1806 aa5.44□□□□□ -1.54
BRCA1-217ENST00000487825 A0A1B0GUL7 405 aa5.44□□□□□ -1.54
BRCA1-217ENST00000487825 LINC01553A4QN01 128 aa5.44□□□□□ -1.54
BRCA1-217ENST00000487825 GRM8O00222 908 aa5.44□□□□□ -1.54
BRCA1-217ENST00000487825 CTAGE5O15320 804 aa5.44□□□□□ -1.54
BRCA1-217ENST00000487825 BAIAP3O94812 1187 aa5.44□□□□□ -1.54
BRCA1-217ENST00000487825 MAP4K4O95819 1239 aaPredicted RBP5.44□□□□□ -1.54
BRCA1-217ENST00000487825 EBLN1P0CF75 366 aa5.44□□□□□ -1.54
BRCA1-217ENST00000487825 ZFXP17010 805 aaPredicted RBP5.44□□□□□ -1.54
BRCA1-217ENST00000487825 IBSPP21815 317 aaPredicted RBP5.44□□□□□ -1.54
BRCA1-217ENST00000487825 RFC2P35250 354 aa5.44□□□□□ -1.54
BRCA1-217ENST00000487825 ABCG1P45844 678 aa5.44□□□□□ -1.54
BRCA1-217ENST00000487825 NEK2P51955 445 aa5.44□□□□□ -1.54
BRCA1-217ENST00000487825 EIF2B5Q13144 721 aaKnown RBP5.44□□□□□ -1.54
BRCA1-217ENST00000487825 TBCCQ15814 346 aa5.44□□□□□ -1.54
BRCA1-217ENST00000487825 PPP1R32Q7Z5V6 425 aa5.44□□□□□ -1.54
BRCA1-217ENST00000487825 DEFB128Q7Z7B8 93 aa5.44□□□□□ -1.54
BRCA1-217ENST00000487825 DDB2Q92466 427 aa5.44□□□□□ -1.54
BRCA1-217ENST00000487825 MVB12AQ96EY5 273 aa5.44□□□□□ -1.54
BRCA1-217ENST00000487825 ALG8Q9BVK2 526 aa5.44□□□□□ -1.54
BRCA1-217ENST00000487825 STK31Q9BXU1 1019 aa5.44□□□□□ -1.54
BRCA1-217ENST00000487825 TTYH3Q9C0H2 523 aa5.44□□□□□ -1.54
BRCA1-217ENST00000487825 TRPV6Q9H1D0 765 aa5.44□□□□□ -1.54
BRCA1-217ENST00000487825 RPAP3Q9H6T3 665 aaPredicted RBP5.44□□□□□ -1.54
BRCA1-217ENST00000487825 CTNNA3Q9UI47 895 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms